Clone Sequence Records
BO14405.3prime Sequence
818 bp (751 high quality bases) assembled on 2006-05-29
> BO14405.3prime
ATGGTCTAGAAAGCTTGCACTTGTTTTTTCCGGAGTGCTACTTCTTCTCC
TGCGCAGGAAGTTCTCGAGCGACTGAAGATCCTTTCGCTTCAGCATCTTA
ATCCTGCTCACCAGTTTTTGCAAGGCTTCGATCCGTTGCTGTGCTTCCTT
GGCGGCGTCGTTGGCCTTCTTAGCGCTCTGCTTATTTCGCTCCAGATCCT
TCTGAGCCTCGCACATGCAGCTATGGAGCTCTTCCACCCGCATCCTGGCC
GCTTTCAGAAGGCTGCGCTTTTCCAGGGCCTCTTTCTGGGCACTGTCGGC
CATCCTCCGGATGTTATCGAGATTTCCGCCCATTTCCTTTAGCATACTCT
TCATAATGTTCACGGATGTGCAGAGCTTGTCACGGATCCCCTTTGCCGAC
GTCGCCGAGCACGAGCTGGCAGCAATGGCTCGTTGGATTTCCTCGATAAC
CCTGTTCGTTTCTGCCAGACTTTTGGTGTATTCATCGAGGAGCTGCTTCT
TCCCGTTGAGAGCCGCCTCCGCAGCCTTGGCCGCCTGCAACGCCCTGTCC
GCCAGCATTTCCCGTGCCCTGTAGCCCGCCATCTCCGCGGCACATGGCTG
CGCATCCTTGGCGTCCTTCGCATCCTTGGCCGCCTTCGAGGCCACCTGGC
TGGCTTTCATGCTCGTCTTGCAGGGAAGGGAGCCGGGCTTGAAACGCGGA
TCATTCCGCTGGGCAGGATGCGCGGCGGTCGACAGCAGGATGTTCGAAAG
AAGCACCATCGTAACCAGGGAGTCGCAACGCATTGGGAATCCTGCATCGT
ACATGTCGACTGATAACT
BO14405.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:21:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11698-PA | 789 | CG11698-RA | 1..786 | 804..19 | 3855 | 99.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:19:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11698-RA | 910 | CG11698-RA | 57..842 | 804..19 | 3885 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:19:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8312244..8313029 | 804..19 | 3885 | 99.6 | Minus |
Blast to na_te.dros performed on 2015-02-10 18:19:11 has no hits.
BO14405.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:26:54 Download gff for
BO14405.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11698-PA | 1..789 | 16..804 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:22:16 Download gff for
BO14405.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11698-PA | 1..789 | 16..804 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 23:06:05 Download gff for
BO14405.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11698-RA | 57..851 | 8..804 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:41:55 Download gff for
BO14405.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11698-RA | 57..851 | 8..804 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:41:55 Download gff for
BO14405.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8312244..8313038 | 8..804 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 23:06:05 Download gff for
BO14405.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4137966..4138760 | 8..804 | 99 | | Minus |
BO14405.5prime Sequence
818 bp (788 high quality bases) assembled on 2006-05-29
> BO14405.5prime
GAAGTTATCAGTCGACATGTACGATGCAAGATTCCCAATGCGTTGCGACT
CCCTGGTTACGATGTTGCTTCTTTCGAACATCCTGCTGTCGACCGCCGCG
CATCCTGCCCAGCGGAATGATCCGCGTTTCAAGCCCGGCTCCCTTCCCTG
CAAGACGAGCATGAAAGCCAGCCAGGTGGCCTCGAAGGCGGCCAAGGATG
CGAAGGACGCCAAGGATGCGCAGCCATGTGCCGCGGAGATGGCGGGCTAC
AGGGCACGGGAAATGCTGGCGGACAGGGCGTTGCAGGCGGCCAAGGCTGC
GGAGGCGGCTCTCAACGGGAAGAAGCAGCTCCTCGATGAATACACCAAAA
GTCTGGCAGAAACGAACAGGGTTATCGAGGAAATCCAACGAGCCATTGCT
GCCAGCTCGTGCTCGGCGACGTCGGCAAAGGGGATCCGTGACAAGCTCTG
CACATCCGTGAACATTATGAAGAGTATGCTAAAGGAAATGGGCGGAAATC
TCGATAACATCCGGAGGATGGCCGACAGTGCCCAGAAAGAGGCCCTGGAA
AAGCGCAGCCTTCTGAAAGCGGCCAGGATGCGGGTGGAAGAGCTCCATAG
CTGCATGTGCGAGGCTCAGAAGGATCTGGAGCGAAATAAGCAGAGCGCTA
AGAAGGCCAACGACGCCGCCAAGGAAGCACAGCAACGGATCGAAGCCTTG
CAAAAACTGGTGAGCAGGATTAAGATGCTGAAGCGAAAGGATCTTCAGTC
GCTCGAGAACTTCCTGCGCAGGAGAAGAAGTAGCACTCCGGAAAAAACAA
GTGCAAGCTTTCTAGACC
BO14405.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:21:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11698-PA | 789 | CG11698-RA | 1..786 | 17..802 | 3905 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:06:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11698-RA | 910 | CG11698-RA | 57..842 | 17..802 | 3915 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 11:05:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8312244..8313029 | 17..802 | 3915 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-09 11:06:00 has no hits.
BO14405.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:26:55 Download gff for
BO14405.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11698-PA | 1..789 | 17..805 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:22:17 Download gff for
BO14405.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11698-PA | 1..789 | 17..805 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 16:41:13 Download gff for
BO14405.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11698-RA | 57..851 | 17..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:42:17 Download gff for
BO14405.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11698-RA | 57..851 | 17..813 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 11:42:17 Download gff for
BO14405.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8312244..8313038 | 17..813 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 16:41:13 Download gff for
BO14405.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4137966..4138760 | 17..813 | 99 | | Plus |
BO14405.complete Sequence
820 bp assembled on 2006-10-11
GenBank Submission: FJ633112
> BO14405.complete
GAAGTTATCAGTCGACATGTACGATGCAAGATTCCCAATGCGTTGCGACT
CCCTGGTTACGATGTTGCTTCTTTCGAACATCCTGCTGTCGACCGCCGCG
CATCCTGCCCAGCGGAATGATCCGCGTTTCAAGCCCGGCTCCCTTCCCTG
CAAGACGAGCATGAAAGCCAGCCAGGTGGCCTCGAAGGCGGCCAAGGATG
CGAAGGACGCCAAGGATGCGCAGCCATGTGCCGCGGAGATGGCGGGCTAC
AGGGCACGGGAAATGCTGGCGGACAGGGCGTTGCAGGCGGCCAAGGCTGC
GGAGGCGGCTCTCAACGGGAAGAAGCAGCTCCTCGATGAATACACCAAAA
GTCTGGCAGAAACGAACAGGGTTATCGAGGAAATCCAACGAGCCATTGCT
GCCAGCTCGTGCTCGGCGACGTCGGCAAAGGGGATCCGTGACAAGCTCTG
CACATCCGTGAACATTATGAAGAGTATGCTAAAGGAAATGGGCGGAAATC
TCGATAACATCCGGAGGATGGCCGACAGTGCCCAGAAAGAGGCCCTGGAA
AAGCGCAGCCTTCTGAAAGCGGCCAGGATGCGGGTGGAAGAGCTCCATAG
CTGCATGTGCGAGGCTCAGAAGGATCTGGAGCGAAATAAGCAGAGCGCTA
AGAAGGCCAACGACGCCGCCAAGGAAGCACAGCAACGGATCGAAGCCTTG
CAAAAACTGGTGAGCAGGATTAAGATGCTGAAGCGAAAGGATCTTCAGTC
GCTCGAGAACTTCCTGCGCAGGAGAAGAAGTAGCACTCCGGAAAAAACAA
GTGCAAGCTTTCTAGACCAT
BO14405.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:06:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11698-RA | 789 | CG11698-PA | 1..786 | 17..802 | 3915 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:06:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11698-RA | 910 | CG11698-RA | 57..842 | 17..802 | 3915 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:06:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8312244..8313029 | 17..802 | 3915 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:06:31 has no hits.
BO14405.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:37:29 Download gff for
BO14405.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11698-RA | 1..789 | 17..805 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:52:26 Download gff for
BO14405.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11698-RA | 22..816 | 17..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:03:13 Download gff for
BO14405.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11698-RA | 57..831 | 17..791 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:37:29 Download gff for
BO14405.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11698-RA | 22..816 | 17..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:14:58 Download gff for
BO14405.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11698-RA | 57..831 | 17..791 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:14:58 Download gff for
BO14405.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8312244..8313018 | 17..791 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:03:13 Download gff for
BO14405.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4137966..4138740 | 17..791 | 99 | | Plus |
BO14405.pep Sequence
Translation from 16 to 820
> BO14405.pep
MYDARFPMRCDSLVTMLLLSNILLSTAAHPAQRNDPRFKPGSLPCKTSMK
ASQVASKAAKDAKDAKDAQPCAAEMAGYRAREMLADRALQAAKAAEAALN
GKKQLLDEYTKSLAETNRVIEEIQRAIAASSCSATSAKGIRDKLCTSVNI
MKSMLKEMGGNLDNIRRMADSAQKEALEKRSLLKAARMRVEELHSCMCEA
QKDLERNKQSAKKANDAAKEAQQRIEALQKLVSRIKMLKRKDLQSLENFL
RRRRSSTPEKTSASFLDH
BO14405.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:55:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11698-PA | 262 | CG11698-PA | 1..262 | 1..262 | 1291 | 100 | Plus |
| CG14840-PA | 300 | CG14840-PA | 87..271 | 50..234 | 320 | 38.4 | Plus |
| CG14841-PA | 274 | CG14841-PA | 85..268 | 50..233 | 300 | 37.5 | Plus |
| CG11694-PA | 261 | CG11694-PA | 50..239 | 41..224 | 278 | 36.8 | Plus |
| CG34459-PC | 305 | CG34459-PC | 114..294 | 44..224 | 263 | 37 | Plus |
