Clone BO14422 Report

Search the DGRC for BO14422

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:144
Well:22
Vector:pDNR-Dual
Associated Gene/TranscriptCG11037-RA
Protein status:BO14422.pep: validated full length
Sequenced Size:910

Clone Sequence Records

BO14422.3prime Sequence

774 bp (738 high quality bases) assembled on 2006-05-29

> BO14422.3prime
ATGGTCTAGAAAGCTTGCTCGTTTTGCTAGCAAAGCTTTAATGCTTTTCT
CGATAAAAGGCTTCACGTACATAACATCCGTGTAGACGCCAGGATAACGG
TTGCTAGCACATCCAATGCCAAAGGACACTATGCCACACACCTGCTTTTT
GAACACCAACGGCCCACCTGAGTCAAAGGTGCACGCATCCTTACGTCCCA
GCACTGCAGCACATATCATACTGTCGGTTATTTTAGCCGTGGGCTGATAG
GCAGCGCGACAGTTCTTTTTGTGAATAATTGGCACTGTCACCGTACGTAG
TAAGTTGTGGGGCCCACGTCCTCGGGGAGCGGTCATGCCCCATCCGGAAA
CCACCAGTTCTACGCCTGGCTTAAGGCTCACCGAACATAAGCTCAGTGTT
CCGATGTTTTTAGCCTTCAATGGAGTTTTCAGCAGTACCACTGCTACATC
CATATTCATGTCGTCCTCTCGAAATTGCTCGGACAGGATGAAGTCCTTAA
CATGGCGTCGAATACCCTTTTGATTGAGATTCGAAATGCCGGCAGCCACA
ATCCATTCGCTCGCCTTCATTCGACCCAGAAAACAGTGAGCCGCCGTCAG
GACGATGTTTTCGTTGAGCAATGTACCGCCACAAACAAAATCGTCTTCAT
AAAGCAAGGCTGTTAGGTATCCTCCCAACTTGGCATTTGTGGTCACATGG
CCGCCAATTACGCCAGTTTCATGTGGTGATGGAAGAACTATCTTGGCCAG
CTGTGCCACATCGAGAGTGAGATT

BO14422.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:21:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG11037-PA 879 CG11037-RA 121..876 774..19 3755 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:14:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG11037-RA 913 CG11037-RA 123..878 774..19 3765 99.9 Minus
CG10588-RB 3727 CG10588-RB 3500..3718 19..237 1095 100 Plus
CG10587-RA 866 CG10587-RA 560..838 297..19 495 78.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:14:23
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20960723..20961264 233..774 2680 99.6 Plus
3L 28110227 3L 20960433..20960651 19..237 1095 100 Plus
3L 28110227 3L 20961565..20961776 19..230 415 79.7 Plus
3L 28110227 3L 20955805..20955968 29..192 340 80.5 Plus
Blast to na_te.dros performed on 2015-02-03 06:14:29 has no hits.

BO14422.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:27:27 Download gff for BO14422.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11037-PA 121..879 15..774 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:23:04 Download gff for BO14422.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11037-PA 121..879 15..774 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:21:35 Download gff for BO14422.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11037-RA 123..881 15..774 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 09:37:09 Download gff for BO14422.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11037-RA 123..881 15..774 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 09:37:09 Download gff for BO14422.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 20960429..20960650 15..236 99 <- Plus
3L 20960727..20961264 237..774 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:21:35 Download gff for BO14422.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20953529..20953750 15..236 99 <- Plus
arm_3L 20953827..20954364 237..774 99   Plus

BO14422.5prime Sequence

888 bp (755 high quality bases) assembled on 2006-05-29

> BO14422.5prime
GAAGTTATCAGTCGACATGGAATGGCATCTCGTTTGCTGCGTGCTGGCTT
GCACTTTAGTTTCGACCCAAGTATATGGCCAAGAACAGGAGAAAATTGTG
CTTTCCCTGCCGGATGAAAGTGGTCAACCGGGCAAAAATCTCACTCTCGA
TGTGGCACAGCTGGCCAAGATAGTTCTTCCATCACCACATGAAACTCGCG
TAATTGGCGGCCATGTGACCACAAATGCCAAGTTGGGAGGATACCTAACA
GCCTTGCTTTATGAAGACGATTTTGTTTGTGGCGGTACATTGCTCAACGA
AAACATCGTCCTGACGGCGGCTCACTGTTTTCTGGGTCGAATGAAGGCGA
GCGAATGGATTGTGGCTGCCGGCATTTCGAATCTCAATCAAAAGGGTATT
CGACGCCATGTTAAGGACTTCATCCTGTCCGAGCAATTTCGAGAGGACGA
CATGAATATGGATGTAGCAGTGGTACTGCTGAAAACTCCATTGAAGGCTA
AAAACATCGGAACACTGAGCTTATGTTCGGTGAGCCTTAAGCCAGGCGTA
GAACTGGTGGTTTCCGGATGGGGCATGACCGCTCCCCGAGGACGTGGGCC
CCACAACTTACTACGTACGGTGACAGTGCCAATTATTCACAAAAAGAACT
GTCGCGCTGCCTATCAGCCCACGGCTAAAATAACCGACAGTATGATATGT
GCTGCAGTGCTGGGACGTAAGGATGCGTGCACCTTTGACTCAGGTGGGCC
GTTGGTGTTCAAAAAGCAGGTGTGTGGCATAGTGTCCTTTGGCATTGGAT
GTGCTAGCAACCGTTATCCTGGCGTCTACACGGATGTTATGTACGTGAAG
CCTTTTATCGAGAAAAGCATTTAAGCTTTGCTAACAAA

BO14422.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:21:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG11037-PA 879 CG11037-RA 1..867 17..883 4310 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:25:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG11037-RA 913 CG11037-RA 3..874 17..888 4330 99.8 Plus
CG10588-RB 3727 CG10588-RB 3504..3718 888..674 1045 99.1 Minus
CG10587-RA 866 CG10587-RA 560..817 614..871 450 78.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:25:36
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20960723..20961384 678..17 3295 99.8 Minus
3L 28110227 3L 20960437..20960651 888..674 1045 99.1 Minus
3L 28110227 3L 20961586..20961776 871..681 370 79.6 Minus
3L 28110227 3L 20955805..20955968 882..719 325 79.9 Minus
Blast to na_te.dros performed on 2015-02-12 05:25:39 has no hits.

BO14422.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:27:28 Download gff for BO14422.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11037-PA 1..869 17..885 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:23:05 Download gff for BO14422.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11037-PA 1..869 17..885 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 02:56:33 Download gff for BO14422.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11037-RA 1..871 16..885 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:23:32 Download gff for BO14422.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11037-RA 1..871 16..885 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:23:32 Download gff for BO14422.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 20960440..20960650 675..885 99 <- Minus
3L 20960727..20961384 17..674 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 02:56:33 Download gff for BO14422.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20953540..20953750 675..885 99 <- Minus
arm_3L 20953827..20954484 17..674 100   Minus

BO14422.complete Sequence

910 bp assembled on 2006-10-11

GenBank Submission: FJ633118

> BO14422.complete
GAAGTTATCAGTCGACATGGAATGGCATCTCGTTTGCTGCGTGCTGGCTT
GCACTTTAGTTTCGACCCAAGTATATGGCCAAGAACAGGAGAAAATTGTG
CTTTCCCTGCCGGATGAAAGTGGTCAACCGGGCAAAAATCTCACTCTCGA
TGTGGCACAGCTGGCCAAGATAGTTCTTCCATCACCACATGAAACTCGCG
TAATTGGCGGCCATGTGACCACAAATGCCAAGTTGGGAGGATACCTAACA
GCCTTGCTTTATGAAGACGATTTTGTTTGTGGCGGTACATTGCTCAACGA
AAACATCGTCCTGACGGCGGCTCACTGTTTTCTGGGTCGAATGAAGGCGA
GCGAATGGATTGTGGCTGCCGGCATTTCGAATCTCAATCAAAAGGGTATT
CGACGCCATGTTAAGGACTTCATCCTGTCCGAGCAATTTCGAGAGGACGA
CATGAATATGGATGTAGCAGTGGTACTGCTGAAAACTCCATTGAAGGCTA
AAAACATCGGAACACTGAGCTTATGTTCGGTGAGCCTTAAGCCAGGCGTA
GAACTGGTGGTTTCCGGATGGGGCATGACCGCTCCCCGAGGACGTGGGCC
CCACAACTTACTACGTACGGTGACAGTGCCAATTATTCACAAAAAGAACT
GTCGCGCTGCCTATCAGCCCACGGCTAAAATAACCGACAGTATGATATGT
GCTGCAGTGCTGGGACGTAAGGATGCGTGCACCTTTGACTCAGGTGGGCC
GTTGGTGTTCAAAAAGCAGGTGTGTGGCATAGTGTCCTTTGGCATTGGAT
GTGCTAGCAACCGTTATCCTGGCGTCTACACGGATGTTATGTACGTGAAG
CCTTTTATCGAGAAAAGCATTAAAGCTTTGCTAGCAAAACGAGCAAGCTT
TCTAGACCAT

BO14422.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:18:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG11037-RA 879 CG11037-PA 1..876 17..892 4380 100 Plus
CG10587-RA 831 CG10587-PA 550..828 614..892 495 78.5 Plus
CG10587-RC 870 CG10587-PC 656..867 681..892 415 79.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:18:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG11037-RA 913 CG11037-RA 3..878 17..892 4380 100 Plus
CG10588-RB 3727 CG10588-RB 3500..3718 892..674 1095 100 Minus
CG10587-RA 866 CG10587-RA 560..838 614..892 495 78.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:18:51
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20960723..20961384 678..17 3295 99.8 Minus
3L 28110227 3L 20960433..20960651 892..674 1095 100 Minus
3L 28110227 3L 20961565..20961776 892..681 415 79.7 Minus
3L 28110227 3L 20955805..20955968 882..719 340 80.5 Minus
Blast to na_te.dros performed on 2014-11-27 07:18:51 has no hits.

BO14422.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:36:57 Download gff for BO14422.complete
Subject Subject Range Query Range Percent Splice Strand
CG11037-RA 1..879 17..896 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:52:09 Download gff for BO14422.complete
Subject Subject Range Query Range Percent Splice Strand
CG11037-RA 1..881 16..896 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:11:43 Download gff for BO14422.complete
Subject Subject Range Query Range Percent Splice Strand
CG11037-RA 3..878 17..894 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:36:58 Download gff for BO14422.complete
Subject Subject Range Query Range Percent Splice Strand
CG11037-RA 1..881 16..896 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:08:06 Download gff for BO14422.complete
Subject Subject Range Query Range Percent Splice Strand
CG11037-RA 3..878 17..894 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:08:06 Download gff for BO14422.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20960431..20960650 675..894 99 <- Minus
3L 20960727..20961384 17..674 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:11:43 Download gff for BO14422.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20953531..20953750 675..894 99 <- Minus
arm_3L 20953827..20954484 17..674 100   Minus

BO14422.pep Sequence

Translation from 16 to 910

> BO14422.pep
MEWHLVCCVLACTLVSTQVYGQEQEKIVLSLPDESGQPGKNLTLDVAQLA
KIVLPSPHETRVIGGHVTTNAKLGGYLTALLYEDDFVCGGTLLNENIVLT
AAHCFLGRMKASEWIVAAGISNLNQKGIRRHVKDFILSEQFREDDMNMDV
AVVLLKTPLKAKNIGTLSLCSVSLKPGVELVVSGWGMTAPRGRGPHNLLR
TVTVPIIHKKNCRAAYQPTAKITDSMICAAVLGRKDACTFDSGGPLVFKK
QVCGIVSFGIGCASNRYPGVYTDVMYVKPFIEKSIKALLAKRASFLDH

BO14422.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:55:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG11037-PA 292 CG11037-PA 1..292 1..292 1523 100 Plus
CG10587-PA 276 CG10587-PA 1..276 1..292 908 61.3 Plus
CG10587-PC 289 CG10587-PC 1..289 1..292 884 58.7 Plus
Sems-PA 275 CG10586-PA 23..273 41..291 871 66.5 Plus
CG10587-PD 225 CG10587-PD 1..205 1..221 585 53.8 Plus