Clone BO14430 Report

Search the DGRC for BO14430

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:144
Well:30
Vector:pDNR-Dual
Associated Gene/TranscriptCG17991-RA
Protein status:BO14430.pep: validated full length
Sequenced Size:916

Clone Sequence Records

BO14430.3prime Sequence

914 bp (722 high quality bases) assembled on 2006-05-29

> BO14430.3prime
ATGGTCTAGAAAGCTTGCGTGTCCGTCTGCCTCCGCTAGGTTTTCCTTCG
TGTAATCCAAAACACGACGCTTCATACGACAGATGTATTGGCTATGCATG
AGGTACATTTTGAGGAATCCCTTGATCGCTATGAAAGTCAATCCCCCAAG
AAGAGTTTGTTGCAATCTATCGTCGACAGAGCTGTAAAGAACTCTACCCA
CGTACATGGATATGGTGGGCAAGAGGATGGCTCCACAGACCACCCGCGAT
GCCGAATATTCGGTCATTGGTGCAGAAGGGTATGGTTCGGTCTGGTGGTC
ATATTTCCGTCCTAGGCACATCATTGAAAGACTTCGCAGCAATGAATAAC
ATATTCTAATGAAGCGCAACAGGGCATCTTCCCAGGGAATTAAGCGTCCA
AGTATCAGAACTACCGAGATTAATGGGAATCCGACCAGAACAACCAACAG
GTCTCCCGATTGAATTATTTGATGAACGTGACCTTCCTGACCAGTGATCT
GCAAATATGTTTTTGCTCCGAATGAAACCGCTGACCAATAGGCAAAGACC
ACAGTGAAGACATTGGCCAGGCAATTATATAAGTTTGTTAGGATAAGATC
GTTGGTCAGCTCCAAAGCCCTATCGAAAATCCAGAGATTCGGGTATGCAA
TGGTGTACTCCGTTTGGCATTGTGGACAGGACACGGCTTGCAGATTGTTG
TTTATTCGGGTCTTCTCGTCGATCCAGAGGGAAATGCAGCTCTGGTGCAC
CCACTTATTGGTTCCTCGGCAGAGACATGGATTCACCCAAGCCTGGCGAC
CTGCCTCCCCATCGGTCTCAAAACAGACCCAGCAACAGCGCTCCAGTTCC
GTCGAATCTCCTCCAGCTGAAGCTTGTGGCGCAGCAACGTTGCTAGCCAT
GTCGACTGATAACT

BO14430.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:21:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG17991-PA 885 CG17991-RA 1..882 900..19 4235 99.2 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:53:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG17991-RA 1064 CG17991-RA 66..947 900..19 4305 99.2 Minus
CG9855-RC 1718 CG9855-RC 406..549 793..650 195 76.6 Minus
CG9855-RA 1533 CG9855-RA 406..549 793..650 195 76.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:53:41
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27241332..27242213 900..19 4305 99.2 Minus
3R 32079331 3R 4397260..4397403 650..793 195 75.7 Plus
Blast to na_te.dros performed on 2015-02-12 11:53:45 has no hits.

BO14430.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:27:42 Download gff for BO14430.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17991-PA 1..885 18..900 98   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:23:26 Download gff for BO14430.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17991-PA 1..885 18..900 98   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 01:08:27 Download gff for BO14430.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17991-RA 59..947 19..910 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:53:20 Download gff for BO14430.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17991-RA 59..947 19..910 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:53:20 Download gff for BO14430.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 27241325..27242213 19..910 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 01:08:27 Download gff for BO14430.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 23067047..23067935 19..910 98   Minus

BO14430.5prime Sequence

910 bp (768 high quality bases) assembled on 2006-05-29

> BO14430.5prime
GAAGTTATCAGTCGACATGGCTAGCAACGTTGCTGCGCCACAAGCTTCAG
CTGGAGGAGATTCGACGGAACTGGAGCGCTGTTGCTGGATCTGTTTTGAG
ACCGATAAGGAGGCAGGTCGCCAGGCTTGGGTGAATCCATGTCTCTGCCG
AGGAACCAATAAGTGGGTGCACCAGAGCTGCATTTCCCTCTGGATCGACG
AGAAGACCCGAATAAACAACAATCTGCAAGCCGTTTCCTGTCCACAATGC
CAAACGGAGTACACCATTGCATACCCGAATCTCTGGATTTTCGATAGGGC
TTTGGAGCTGACCAACGATCTTATCCTAACAAACTTATATAATTGCCTGG
CCAATGTCTTCACTGTGGTCTTTGCCTATTGGTCAGCGGTTTCATTCGGA
GCAAAAACATATTTGCAGATCACTGGTCAGGAAGGTCACGTTCATCAAAT
AATTCAATCGGGAGACCTGTTGGTTGTTCTGGTCGGATTCCCATTAATCT
CGGTAGTTCTGATACTTGGACGCTTAATTCCCTGGGAAGATGCCCTGTTG
CGCTTCATTAGAATATGTTATTCATTGCTGCGAAGTCTTTCAATGATGTG
CCTAGGACGGAAATATGACCACCAGACCGAACCATACCCTTCTGCACCAA
TGACCGAATATTCGGCATCGCGGGTGGTCTGTGGAGCCATCCTCTTGCCC
ACCATATCCATGTACGTGGGTAGAGTTCTTTACAGCTCTGTCGACGATAG
ATTGCAACAAACTCTTCTTGGGGGATTGACTTTCATAGCGATCAAGGGAT
TCCTCAAAATGTACCTCATGCATAGCCAATACATCTGTCGTATGAAGCGT
CGTGTTTTGGATACACGAAGGAAAACCTAGCGGAGGCAGACGGACACGCA
AGCTTTCTAG

BO14430.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:21:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG17991-PA 885 CG17991-RA 1..846 17..862 4155 99.6 Plus
CG17991-PA 885 CG17991-RA 847..882 862..897 180 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:10:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG17991-RA 1064 CG17991-RA 66..947 17..897 4340 99.5 Plus
CG9855-RC 1718 CG9855-RC 355..549 73..267 210 75.1 Plus
CG9855-RA 1533 CG9855-RA 355..549 73..267 210 75.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:10:39
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27241332..27242213 17..897 4315 99.5 Plus
3R 32079331 3R 4397260..4397454 267..73 210 73.8 Minus
Blast to na_te.dros performed on 2015-02-11 16:10:41 has no hits.

BO14430.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:27:43 Download gff for BO14430.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17991-PA 1..885 17..898 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:23:27 Download gff for BO14430.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17991-PA 1..885 17..898 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 13:59:49 Download gff for BO14430.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17991-RA 59..947 7..897 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:48:00 Download gff for BO14430.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17991-RA 59..947 7..897 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:48:00 Download gff for BO14430.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 27241325..27242213 7..897 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 13:59:49 Download gff for BO14430.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 23067047..23067935 7..897 99   Plus

BO14430.complete Sequence

916 bp assembled on 2006-10-11

GenBank Submission: FJ633120

> BO14430.complete
GAAGTTATCAGTCGACATGGCTAGCAACGTTGCTGCGCCACAAGCTTCAG
CTGGAGGAGATTCGACGGAACTGGAGCGCTGTTGCTGGATCTGTTTTGAG
ACCGATAAGGAGGCAGGTCGCCAGGCTTGGGTGAATCCATGTCTCTGCCG
AGGAACCAATAAGTGGGTGCACCAGAGCTGCATTTCCCTCTGGATCGACG
AGAAGACCCGAATAAACAACAATCTGCAAGCCGTTTCCTGTCCACAATGC
CAAACGGAGTACACCATTGCATACCCGAATCTCTGGATTTTCGATAGGGC
TTTGGAGCTGACCAACGATCTTATCCTAACAAACTTATATAATTGCCTGG
CCAATGTCTTCACTGTGGTCTTTGCCTATTGGTCAGCGGTTTCATTCGGA
GCAAAAACATATTTGCAGATCACTGGTCAGGAAGGTCACGTTCATCAAAT
AATTCAATCGGGAGACCTGTTGGTTGTTCTGGTCGGATTCCCATTAATCT
CGGTAGTTCTGATACTTGGACGCTTAATTCCCTGGGAAGATGCCCTGTTG
CGCTTCATTAGAATATGTTATTCATTGCTGCGAAGTCTTTCAATGATGTG
CCTAGGACGGAAATATGACCACCAGACCGAACCATACCCTTCTGCACCAA
TGACCGAATATTCGGCATCGCGGGTGGTCTGTGGAGCCATCCTCTTGCCC
ACCATATCCATGTACGTGGGTAGAGTTCTTTACAGCTCTGTCGACGATAG
ATTGCAACAAACTCTTCTTGGGGGATTGACTTTCATAGCGATCAAGGGAT
TCCTCAAAATGTACCTCATGCATAGCCAATACATCTGTCGTATGAAGCGT
CGTGTTTTGGATTACACGAAGGAAAACCTAGCGGAGGCAGACGGACACGC
AAGCTTTCTAGACCAT

BO14430.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:10:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG17991-RA 885 CG17991-PA 1..882 17..898 4365 99.7 Plus
CG9855-RC 1149 CG9855-PC 183..377 73..267 210 73.8 Plus
CG9855-RA 1149 CG9855-PA 183..377 73..267 210 73.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:10:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG17991-RA 1064 CG17991-RA 66..947 17..898 4365 99.7 Plus
CG9855-RC 1718 CG9855-RC 355..549 73..267 210 73.8 Plus
CG9855-RA 1533 CG9855-RA 355..549 73..267 210 73.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:10:45
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27241332..27242213 17..898 4365 99.7 Plus
3R 32079331 3R 4397260..4397454 267..73 210 73.8 Minus
Blast to na_te.dros performed on 2014-11-27 10:10:45 has no hits.

BO14430.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:37:02 Download gff for BO14430.complete
Subject Subject Range Query Range Percent Splice Strand
CG17991-RA 1..885 17..899 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:52:13 Download gff for BO14430.complete
Subject Subject Range Query Range Percent Splice Strand
CG17991-RA 59..947 7..898 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:05:42 Download gff for BO14430.complete
Subject Subject Range Query Range Percent Splice Strand
CG17991-RA 66..947 17..900 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:37:02 Download gff for BO14430.complete
Subject Subject Range Query Range Percent Splice Strand
CG17991-RA 59..947 7..898 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:15:00 Download gff for BO14430.complete
Subject Subject Range Query Range Percent Splice Strand
CG17991-RA 66..947 17..900 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:15:00 Download gff for BO14430.complete
Subject Subject Range Query Range Percent Splice Strand
3R 27241332..27242213 17..900 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:05:42 Download gff for BO14430.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 23067054..23067935 17..900 99   Plus

BO14430.pep Sequence

Translation from 16 to 916

> BO14430.pep
MASNVAAPQASAGGDSTELERCCWICFETDKEAGRQAWVNPCLCRGTNKW
VHQSCISLWIDEKTRINNNLQAVSCPQCQTEYTIAYPNLWIFDRALELTN
DLILTNLYNCLANVFTVVFAYWSAVSFGAKTYLQITGQEGHVHQIIQSGD
LLVVLVGFPLISVVLILGRLIPWEDALLRFIRICYSLLRSLSMMCLGRKY
DHQTEPYPSAPMTEYSASRVVCGAILLPTISMYVGRVLYSSVDDRLQQTL
LGGLTFIAIKGFLKMYLMHSQYICRMKRRVLDYTKENLAEADGHASFLDH

BO14430.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:55:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG17991-PA 294 CG17991-PA 1..294 1..294 1563 100 Plus
CG9855-PC 382 CG9855-PC 46..335 2..288 715 52.4 Plus
CG9855-PA 382 CG9855-PA 46..335 2..288 715 52.4 Plus
CG16781-PA 383 CG16781-PA 38..332 20..294 493 37.7 Plus
CG16781-PB 386 CG16781-PB 41..335 20..294 493 37.7 Plus