Clone Sequence Records
BO14450.5prime Sequence
785 bp (784 high quality bases) assembled on 2006-05-29
> BO14450.5prime
GAAGTTATCAGTCGACATGACCAAGAAGGAGTCATCCGTCCCGACGCTAT
GTTGGGGATACGCCGGGATACGCGGCATGTTCCAAACTGGAAGACCAGTG
GATCCGCCCCCTCCTCTCCCTAATTTGCGGATGAAGACGAACCTGATCCT
CAACTACCTTCCGCAGGACATGACGGAGTCTGAGCTGCACCGTCTCTTCT
CCAAGTTCGGTGAGATCCGCAAGGCCAAGATCATCCGCCACCGCAGGACT
GGCATAAGCTGTTGCTACGGATTCGTCGACTACGTGTCGGAACGCCAGGC
GGCTGCTGCCGTGAATGGCATGGATGGCTACGAGACTCGCGGCAAGCGAC
TGAAAGTGGCCTTCGCCCGACCTTCGGAATATGAAAGCACCAGCTCCAGC
CTGTACGTGGGGAACCTGCCCACGTACATGGATGAGAAGAAGGTACGAGA
ACTCTTCGCCACCTACGGCAACATCGTGGATGTGAACTTGCTGCGCCACA
AGTTCAACAATAGGTCCCGTGGCGTGGCCTTCTTGCAATTTGAGTTGGTC
CGCGACGCCGAGGTGGCCAAGTACGGCATGGATCGGTACATGATCGAAGG
CGCCTCCCGGCCCCTGACGGTCAAGTTCGTGGAGCGCGAGAAAAAAGGCT
CGAGTTCTACCTCCAGTGGCTCCCAGTATAAGGACAAGCGTAAATCTTCC
CCACCACCCTACAAGCGTCGCGAGAGGACGAACGATCATCATGTGTCTAA
GCGTTCTCGAGATTCGGACGCAAGCTTTCTAGACC
BO14450.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5213-PA | 756 | CG5213-RA | 1..753 | 17..769 | 3765 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:58:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5213-RA | 1019 | CG5213-RA | 201..953 | 17..769 | 3765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:58:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15494802..15495554 | 17..769 | 3765 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 00:58:07 has no hits.
BO14450.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:28:21 Download gff for
BO14450.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5213-PA | 1..756 | 17..773 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:24:20 Download gff for
BO14450.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5213-PA | 1..756 | 17..773 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:34:45 Download gff for
BO14450.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5213-RA | 193..961 | 9..778 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:39:37 Download gff for
BO14450.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5213-RA | 193..961 | 9..778 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 04:39:37 Download gff for
BO14450.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15494794..15495562 | 9..778 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:34:45 Download gff for
BO14450.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11320516..11321284 | 9..778 | 98 | | Plus |
BO14450.complete Sequence
787 bp assembled on 2007-10-29
GenBank Submission: FJ633131
> BO14450.complete
GAAGTTATCAGTCGACATGACCAAGAAGGAGTCATCCGTCCCGACGCTAT
GTTGGGGATACGCCGGGATACGCGGCATGTTCCAAACTGGAAGACCAGTG
GATCCGCCCCCTCCTCTCCCTAATTTGCGGATGAAGACGAACCTGATCCT
CAACTACCTTCCGCAGGACATGACGGAGTCTGAGCTGCACCGTCTCTTCT
CCAAGTTCGGTGAGATCCGCAAGGCCAAGATCATCCGCCACCGCAGGACT
GGCATAAGCTGTTGCTACGGATTCGTCGACTACGTGTCGGAACGCCAGGC
GGCTGCTGCCGTGAATGGCATGGATGGCTACGAGACTCGCGGCAAGCGAC
TGAAAGTGGCCTTCGCCCGACCTTCGGAATATGAAAGCACCAGCTCCAGC
CTGTACGTGGGGAACCTGCCCACGTACATGGATGAGAAGAAGGTACGAGA
ACTCTTCGCCACCTACGGCAACATCGTGGATGTGAACTTGCTGCGCCACA
AGTTCAACAATAGGTCCCGTGGCGTGGCCTTCTTGCAATTTGAGTTGGTC
CGCGACGCCGAGGTGGCCAAGTACGGCATGGATCGGTACATGATCGAAGG
CGCCTCCCGGCCCCTGACGGTCAAGTTCGTGGAGCGCGAGAAAAAAGGCT
CGAGTTCTACCTCCAGTGGCTCCCAGTATAAGGACAAGCGTAAATCTTCC
CCACCACCCTACAAGCGTCGCGAGAGGACGAACGATCATCATGTGTCTAA
GCGTTCTCGAGATTCGGACGCAAGCTTTCTAGACCAT
BO14450.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:29:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5213-RA | 756 | CG5213-PA | 1..753 | 17..769 | 3765 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:29:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5213-RA | 1019 | CG5213-RA | 201..953 | 17..769 | 3765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:29:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15494802..15495554 | 17..769 | 3765 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:29:54 has no hits.
BO14450.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:02:25 Download gff for
BO14450.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5213-RA | 1..756 | 17..773 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:15:39 Download gff for
BO14450.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5213-RA | 193..961 | 9..778 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:25:45 Download gff for
BO14450.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5213-RA | 201..953 | 17..771 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:45:56 Download gff for
BO14450.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5213-RA | 201..953 | 17..771 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:32:56 Download gff for
BO14450.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5213-RA | 201..953 | 17..771 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:32:56 Download gff for
BO14450.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15494802..15495554 | 17..771 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:25:45 Download gff for
BO14450.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11320524..11321276 | 17..771 | 99 | | Plus |
BO14450.pep Sequence
Translation from 16 to 787
> BO14450.pep
MTKKESSVPTLCWGYAGIRGMFQTGRPVDPPPPLPNLRMKTNLILNYLPQ
DMTESELHRLFSKFGEIRKAKIIRHRRTGISCCYGFVDYVSERQAAAAVN
GMDGYETRGKRLKVAFARPSEYESTSSSLYVGNLPTYMDEKKVRELFATY
GNIVDVNLLRHKFNNRSRGVAFLQFELVRDAEVAKYGMDRYMIEGASRPL
TVKFVEREKKGSSSTSSGSQYKDKRKSSPPPYKRRERTNDHHVSKRSRDS
DASFLDH
BO14450.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:29:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5213-PA | 251 | CG5213-PA | 1..251 | 1..251 | 1313 | 100 | Plus |
Sxl-PE | 314 | CG43770-PE | 85..275 | 41..231 | 355 | 38.7 | Plus |
Sxl-PA | 314 | CG43770-PA | 85..275 | 41..231 | 355 | 38.7 | Plus |
Sxl-PAB | 322 | CG43770-PAB | 93..283 | 41..231 | 355 | 38.7 | Plus |
Sxl-PAC | 331 | CG43770-PAC | 102..292 | 41..231 | 355 | 38.7 | Plus |