Clone Sequence Records
BO14451.3prime Sequence
794 bp (757 high quality bases) assembled on 2006-05-29
> BO14451.3prime
ATGGTCTAGAAAGCTTGCGTTGGTGCGCCCCCTCTTCAGCCAGAGTAAGT
GCCTCAGTTCCGCCCTCCTGCGCTCCCTGGTGGCCCTATGCCTGGCCTCC
TGGGCAGCACAGGCTGCCTTCTCGGCGGCGTTTTTGGTATTCTTGAAATC
CACACGGGCCACCTCCAGCTGGCGGAGCAATAGCTCCACCCGCTTCTTGG
CCGCTTCCACAAGCTGTTGCTTCTCGCCCAGCTCCTGCTGAGCGCCACTG
GCCACGTGCTCCGAGTTGACCACATTATCCTGCGCATTCTTCACCGCCAG
CGTAATGGTGTTCAGCTGATCTGCCGCCTGTTTGGCCGCTTGCCCGGCCG
CAGCATAAGTAGTTTGGGTGGTCTGTAACAAGGTGCTCTCCTCCTGGACC
ACTAGCTCCCCCTCGCGCACCTCGGACTCCAGTTGCTCGACAATCTGTTG
CTTGCCGGCCAGAGCAGCTTCTGCCGCCTTGGCTGCGGCCAGCGCTTTGT
CGGCCAGTTGCTGCTTCACCTGGCGGGCAGCTGCCTCGCCAGCCTCTATC
TGGGCATCGGATGCCTCCATGGCTTCCTTGGCCGCCTTCTGCGCAATGCA
TGAGGCCTTTACCCTGGTCTTTCCATTCATCTTGAAGTCGCACGGGGCAC
CGCCGGAGGATGACGACACACTGTTGTCGCCATCACCATGATGATCCGAC
ATTAGAGCAGCTATCTCATTGGAGGACTGCGGCAACTTGTGGCCCGCAGA
ATGATCTGAGAACAGGAAGAAAAGTAGAAATGCGATTCGTGCTA
BO14451.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11694-PA | 786 | CG11694-RA | 8..783 | 794..19 | 3880 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:08:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11694-RA | 935 | CG11694-RA | 77..852 | 794..19 | 3880 | 100 | Minus |
CG14354-RA | 1041 | CG14354-RA | 281..489 | 597..389 | 250 | 74.6 | Minus |
CG14840-RA | 1006 | CG14840-RA | 637..714 | 261..184 | 195 | 83.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 13:08:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8311286..8312061 | 19..794 | 3880 | 100 | Plus |
3R | 32079331 | 3R | 25815759..25815967 | 597..389 | 250 | 74.6 | Minus |
3R | 32079331 | 3R | 14260500..14260577 | 184..261 | 195 | 83.3 | Plus |
Blast to na_te.dros performed on 2015-02-08 13:08:38 has no hits.
BO14451.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:28:22 Download gff for
BO14451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11694-PA | 9..786 | 16..793 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:24:21 Download gff for
BO14451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11694-PA | 9..786 | 16..793 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:49:36 Download gff for
BO14451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11694-RA | 78..858 | 13..793 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:52:58 Download gff for
BO14451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11694-RA | 78..858 | 13..793 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:52:58 Download gff for
BO14451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8311280..8312060 | 13..793 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:49:36 Download gff for
BO14451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4137002..4137782 | 13..793 | 99 | | Plus |
BO14451.5prime Sequence
815 bp (718 high quality bases) assembled on 2006-05-29
> BO14451.5prime
GAAGTTATCAGTCGACATGGAGATAGCACGAATCGCATTTCTACTTTTCT
TCCTGTTCTCAGATCATTCTGCGGGCCACAAGTTGCCGCAGTCCTCCAAT
GAGATAGCTGCTCTAATGTCGGATCATCATGGTGATGGCGACAACAGTGT
GTCGTCATCCTCCGGCGGTGCCCCGTGCGACTTCAAGATGAATGGAAAGA
CCAGGGTAAAGGCCTCATGCATTGCGCAGAAGGCGGCCAAGGAAGCCATG
GAGGCATCCGATGCCCAGATAGAGGCTGGCGAGGCAGCTGCCCGCCAGGT
GAAGCAGCAACTGGCCGACAAAGCGCTGGCCGCAGCCAAGGCGGCAGAAG
CTGCTCTGGCCGGCAAGCAACAGATTGTCGAGCAACTGGAGTCCGAGGTG
CGCGAGGGGGAGCTAGTGGTCCAGGAGGAGAGCACCTTGTTACAGACCAC
CCAAACTACTTATGCTGCGGCCGGGCAAGCGGCCAAACAGGCGGCAGATC
AGCTGAACACCATTACGCTGGCGGTGAAGAATGCGCAGGATAATGTGGTC
AACTCGGAGCACGTGGCCAGTGGCGCTCAGCAGGAGCTGGGCGAGAAGCA
ACAGCTTGTGGAAGCGGCCAAGAAGCGGGTGGAGCTATTGCTCCGCCAGC
TGGAGGTGGCCCGTGTGGATTTCAAGAATACCAAAAACGCCGCCGAGAAG
GCAGCCTGTGCTGCCCAGGAGGCCAGGCATAGGGCCACCAGGGAGCGCAG
GAGGGCGGAACTGAGGCACTTACTCTGGCTGAAGAGGGGGCGCACCAACG
CAAGCTTTCTAGAAC
BO14451.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11694-PA | 786 | CG11694-RA | 1..783 | 17..799 | 3915 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:41:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11694-RA | 935 | CG11694-RA | 69..852 | 16..799 | 3920 | 100 | Plus |
CG14354-RA | 1041 | CG14354-RA | 281..489 | 221..429 | 250 | 74.6 | Plus |
CG14840-RA | 1006 | CG14840-RA | 637..714 | 557..634 | 195 | 83.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:41:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8311286..8312069 | 799..16 | 3920 | 100 | Minus |
3R | 32079331 | 3R | 25815759..25815967 | 221..429 | 250 | 74.6 | Plus |
3R | 32079331 | 3R | 14260500..14260577 | 634..557 | 195 | 83.3 | Minus |
Blast to na_te.dros performed on 2015-02-11 09:41:04 has no hits.
BO14451.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:28:23 Download gff for
BO14451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11694-PA | 1..786 | 17..802 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:24:23 Download gff for
BO14451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11694-PA | 1..786 | 17..802 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 23:03:14 Download gff for
BO14451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11694-RA | 62..858 | 10..805 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:50:57 Download gff for
BO14451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11694-RA | 62..858 | 10..805 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:50:57 Download gff for
BO14451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8311280..8312076 | 10..805 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 23:03:14 Download gff for
BO14451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4137002..4137798 | 10..805 | 99 | | Minus |
BO14451.complete Sequence
817 bp assembled on 2006-10-11
GenBank Submission: FJ633132
> BO14451.complete
GAAGTTATCAGTCGACATGGAGATAGCACGAATCGCATTTCTACTTTTCT
TCCTGTTCTCAGATCATTCTGCGGGCCACAAGTTGCCGCAGTCCTCCAAT
GAGATAGCTGCTCTAATGTCGGATCATCATGGTGATGGCGACAACAGTGT
GTCGTCATCCTCCGGCGGTGCCCCGTGCGACTTCAAGATGAATGGAAAGA
CCAGGGTAAAGGCCTCATGCATTGCGCAGAAGGCGGCCAAGGAAGCCATG
GAGGCATCCGATGCCCAGATAGAGGCTGGCGAGGCAGCTGCCCGCCAGGT
GAAGCAGCAACTGGCCGACAAAGCGCTGGCCGCAGCCAAGGCGGCAGAAG
CTGCTCTGGCCGGCAAGCAACAGATTGTCGAGCAACTGGAGTCCGAGGTG
CGCGAGGGGGAGCTAGTGGTCCAGGAGGAGAGCACCTTGTTACAGACCAC
CCAAACTACTTATGCTGCGGCCGGGCAAGCGGCCAAACAGGCGGCAGATC
AGCTGAACACCATTACGCTGGCGGTGAAGAATGCGCAGGATAATGTGGTC
AACTCGGAGCACGTGGCCAGTGGCGCTCAGCAGGAGCTGGGCGAGAAGCA
ACAGCTTGTGGAAGCGGCCAAGAAGCGGGTGGAGCTATTGCTCCGCCAGC
TGGAGGTGGCCCGTGTGGATTTCAAGAATACCAAAAACGCCGCCGAGAAG
GCAGCCTGTGCTGCCCAGGAGGCCAGGCATAGGGCCACCAGGGAGCGCAG
GAGGGCGGAACTGAGGCACTTACTCTGGCTGAAGAGGGGGCGCACCAACG
CAAGCTTTCTAGACCAT
BO14451.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:57:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11694-RA | 786 | CG11694-PA | 1..783 | 17..799 | 3915 | 100 | Plus |
CG14354-RA | 897 | CG14354-PA | 202..410 | 221..429 | 250 | 74.6 | Plus |
CG14840-RA | 903 | CG14840-PA | 607..684 | 557..634 | 195 | 83.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:57:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11694-RA | 935 | CG11694-RA | 69..852 | 16..799 | 3920 | 100 | Plus |
CG14354-RA | 1041 | CG14354-RA | 281..489 | 221..429 | 250 | 74.6 | Plus |
CG14840-RA | 1006 | CG14840-RA | 637..714 | 557..634 | 195 | 83.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:57:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8311286..8312069 | 799..16 | 3920 | 100 | Minus |
3R | 32079331 | 3R | 25815759..25815967 | 221..429 | 250 | 74.6 | Plus |
3R | 32079331 | 3R | 14260500..14260577 | 634..557 | 195 | 83.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:57:56 has no hits.
BO14451.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:36:37 Download gff for
BO14451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11694-RA | 1..786 | 17..802 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:51:59 Download gff for
BO14451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11694-RA | 10..806 | 10..805 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:03:24 Download gff for
BO14451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11694-RA | 70..852 | 17..801 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:36:37 Download gff for
BO14451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11694-RA | 10..806 | 10..805 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:30:01 Download gff for
BO14451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11694-RA | 70..852 | 17..801 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:30:01 Download gff for
BO14451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8311283..8312068 | 17..801 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:03:24 Download gff for
BO14451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4137005..4137790 | 17..801 | 99 | | Minus |
BO14451.pep Sequence
Translation from 16 to 817
> BO14451.pep
MEIARIAFLLFFLFSDHSAGHKLPQSSNEIAALMSDHHGDGDNSVSSSSG
GAPCDFKMNGKTRVKASCIAQKAAKEAMEASDAQIEAGEAAARQVKQQLA
DKALAAAKAAEAALAGKQQIVEQLESEVREGELVVQEESTLLQTTQTTYA
AAGQAAKQAADQLNTITLAVKNAQDNVVNSEHVASGAQQELGEKQQLVEA
AKKRVELLLRQLEVARVDFKNTKNAAEKAACAAQEARHRATRERRRAELR
HLLWLKRGRTNASFLDH
BO14451.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:56:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11694-PA | 261 | CG11694-PA | 1..261 | 1..261 | 1277 | 100 | Plus |
CG14840-PA | 300 | CG14840-PA | 9..276 | 6..254 | 496 | 46.6 | Plus |
CG14354-PA | 298 | CG14354-PA | 11..247 | 17..248 | 494 | 49.8 | Plus |
CG34459-PC | 305 | CG34459-PC | 90..295 | 42..240 | 422 | 47.6 | Plus |
CG34459-PB | 305 | CG34459-PB | 90..295 | 42..240 | 422 | 47.6 | Plus |