Clone BO14453 Report

Search the DGRC for BO14453

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:144
Well:53
Vector:pDNR-Dual
Associated Gene/TranscriptCG14763-RA
Protein status:BO14453.pep: validated full length
Sequenced Size:601

Clone Sequence Records

BO14453.3prime Sequence

599 bp (598 high quality bases) assembled on 2006-05-29

> BO14453.3prime
ATGGTCTAGAAAGCTTGCATCGTAGTACAGGTAAAAGGTGGTGCAGACTG
CAAAGTACGAGGGTCTCTCCACGCTGTAGGTCACAAATCCGTCTTTTTCA
GCATCCCACAGGAAGTTGACCATGGAGTAGAGGCCCTGCATCAGGAACTC
GCCCACAGTGACCAGCACTATGTAGCGATATCTGTCGTAGTTGTCGAGTT
TGATGCGGTTCTTGATTTCCTCGCTCACTTGCGCGGCCATGTGGAGGGAA
TGCTTGGGATGGAACATGTACTCATCGTTGTAGTGTCGGTTCATCACCGC
CTTTATGATGTTCTCCACGCGTTCCTTGTTGAGCGGATTCTTGGACTCCA
GGCGGTAGGTGGGCATGAACCGCATGGTGGGCTTGGCTGCCGGAGCACCC
ATCGGCAAGGAAACGCCCATATGGGACTTGGTCAGCGATCCGCGCTGGCT
GCTTGCCGGCCTCGGCTTAGTGCCCTCGGCCGACTTTTCTTTCTTCTCCT
TTTTGCCCTTGCCAGTTTCCGCCTCCTTGGCGGCGGTCTCTGGCACGACA
TCCTTGCTGCGCCGCTCTTCCGGTGAGTCGCCCATGTCGACTGATAACT

BO14453.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG14763-PA 570 CG14763-RA 1..567 585..19 2835 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:54:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG14763-RC 906 CG14763-RC 16..583 586..19 2840 100 Minus
CG14763-RB 690 CG14763-RB 16..583 586..19 2840 100 Minus
CG14763-RA 647 CG14763-RA 16..583 586..19 2840 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:54:23
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7967059..7967264 182..387 1015 99.5 Plus
2R 25286936 2R 7966842..7967007 19..184 830 100 Plus
2R 25286936 2R 7967886..7968009 463..586 620 100 Plus
2R 25286936 2R 7967319..7967400 382..463 410 100 Plus
Blast to na_te.dros performed on 2015-02-11 15:54:26 has no hits.

BO14453.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:28:26 Download gff for BO14453.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14763-PA 1..570 15..585 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:24:27 Download gff for BO14453.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14763-PA 1..570 15..585 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:33:14 Download gff for BO14453.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14763-RA 8..587 14..595 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:33:48 Download gff for BO14453.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14763-RA 8..587 14..595 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:33:48 Download gff for BO14453.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 7967059..7967258 182..381 100 <- Plus
2R 7966838..7967004 14..181 98 <- Plus
2R 7967319..7967399 382..462 100 <- Plus
2R 7967886..7968017 463..595 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:33:14 Download gff for BO14453.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3854343..3854509 14..181 98 <- Plus
arm_2R 3854564..3854763 182..381 100 <- Plus
arm_2R 3854824..3854904 382..462 100 <- Plus
arm_2R 3855391..3855522 463..595 97   Plus

BO14453.5prime Sequence

599 bp (598 high quality bases) assembled on 2006-05-29

> BO14453.5prime
GAAGTTATCAGTCGACATGGGCGACTCACCGGAAGAGCGGCGCAGCAAGG
ATGTCGTGCCAGAGACCGCCGCCAAGGAGGCGGAAACTGGCAAGGGCAAA
AAGGAGAAGAAAGAAAAGTCGGCCGAGGGCACTAAGCCGAGGCCGGCAAG
CAGCCAGCGCGGATCGCTGACCAAGTCCCATATGGGCGTTTCCTTGCCGA
TGGGTGCTCCGGCAGCCAAGCCCACCATGCGGTTCATGCCCACCTACCGC
CTGGAGTCCAAGAATCCGCTCAACAAGGAACGCGTGGAGAACATCATAAA
GGCGGTGATGAACCGACACTACAACGATGAGTACATGTTCCATCCCAAGC
ATTCCCTCCACATGGCCGCGCAAGTGAGCGAGGAAATCAAGAACCGCATC
AAACTCGACAACTACGACAGATATCGCTACATAGTGCTGGTCACTGTGGG
CGAGTTCCTGATGCAGGGCCTCTACTCCATGGTCAACTTCCTGTGGGATG
CTGAAAAAGACGGATTTGTGACCTACAGCGTGGAGAGACCCTCGTACTTT
GCAGTCTGCACCACCTTTTACCTGTACTACGATGCAAGCTTTCTAGACC

BO14453.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG14763-PA 570 CG14763-RA 1..567 17..583 2835 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:42:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG14763-RC 906 CG14763-RC 16..583 16..583 2840 100 Plus
CG14763-RB 690 CG14763-RB 16..583 16..583 2840 100 Plus
CG14763-RA 647 CG14763-RA 16..583 16..583 2840 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:41:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7967059..7967264 420..215 1015 99.5 Minus
2R 25286936 2R 7966842..7967007 583..418 830 100 Minus
2R 25286936 2R 7967886..7968009 139..16 620 100 Minus
2R 25286936 2R 7967319..7967400 220..139 410 100 Minus
Blast to na_te.dros performed on 2015-02-11 09:42:00 has no hits.

BO14453.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:28:27 Download gff for BO14453.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14763-PA 1..570 17..587 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:24:28 Download gff for BO14453.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14763-PA 1..570 17..587 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 23:03:42 Download gff for BO14453.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14763-RA 8..587 7..588 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:53:05 Download gff for BO14453.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14763-RA 8..587 7..588 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:53:05 Download gff for BO14453.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 7966838..7967004 421..588 98 <- Minus
2R 7967059..7967258 221..420 100 <- Minus
2R 7967319..7967399 140..220 100 <- Minus
2R 7967886..7968017 7..139 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 23:03:42 Download gff for BO14453.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3854343..3854509 421..588 98 <- Minus
arm_2R 3854564..3854763 221..420 100 <- Minus
arm_2R 3854824..3854904 140..220 100 <- Minus
arm_2R 3855391..3855522 7..139 97   Minus

BO14453.complete Sequence

601 bp assembled on 2006-10-11

GenBank Submission: FJ633133

> BO14453.complete
GAAGTTATCAGTCGACATGGGCGACTCACCGGAAGAGCGGCGCAGCAAGG
ATGTCGTGCCAGAGACCGCCGCCAAGGAGGCGGAAACTGGCAAGGGCAAA
AAGGAGAAGAAAGAAAAGTCGGCCGAGGGCACTAAGCCGAGGCCGGCAAG
CAGCCAGCGCGGATCGCTGACCAAGTCCCATATGGGCGTTTCCTTGCCGA
TGGGTGCTCCGGCAGCCAAGCCCACCATGCGGTTCATGCCCACCTACCGC
CTGGAGTCCAAGAATCCGCTCAACAAGGAACGCGTGGAGAACATCATAAA
GGCGGTGATGAACCGACACTACAACGATGAGTACATGTTCCATCCCAAGC
ATTCCCTCCACATGGCCGCGCAAGTGAGCGAGGAAATCAAGAACCGCATC
AAACTCGACAACTACGACAGATATCGCTACATAGTGCTGGTCACTGTGGG
CGAGTTCCTGATGCAGGGCCTCTACTCCATGGTCAACTTCCTGTGGGATG
CTGAAAAAGACGGATTTGTGACCTACAGCGTGGAGAGACCCTCGTACTTT
GCAGTCTGCACCACCTTTTACCTGTACTACGATGCAAGCTTTCTAGACCA
T

BO14453.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:37:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG14763-RC 570 CG14763-PC 1..567 17..583 2835 100 Plus
CG14763-RB 570 CG14763-PB 1..567 17..583 2835 100 Plus
CG14763-RA 570 CG14763-PA 1..567 17..583 2835 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:37:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG14763-RC 906 CG14763-RC 16..583 16..583 2840 100 Plus
CG14763-RB 690 CG14763-RB 16..583 16..583 2840 100 Plus
CG14763-RA 647 CG14763-RA 16..583 16..583 2840 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:37:02
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7967059..7967264 420..215 1015 99.5 Minus
2R 25286936 2R 7966842..7967007 583..418 830 100 Minus
2R 25286936 2R 7967886..7968009 139..16 620 100 Minus
2R 25286936 2R 7967319..7967400 220..139 410 100 Minus
Blast to na_te.dros performed on 2014-11-27 14:37:03 has no hits.

BO14453.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:36:39 Download gff for BO14453.complete
Subject Subject Range Query Range Percent Splice Strand
CG14763-RA 1..570 17..587 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:52:00 Download gff for BO14453.complete
Subject Subject Range Query Range Percent Splice Strand
CG14763-RA 8..587 7..588 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:43:09 Download gff for BO14453.complete
Subject Subject Range Query Range Percent Splice Strand
CG14763-RA 17..583 17..585 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:36:39 Download gff for BO14453.complete
Subject Subject Range Query Range Percent Splice Strand
CG14763-RA 8..587 7..588 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:49:11 Download gff for BO14453.complete
Subject Subject Range Query Range Percent Splice Strand
CG14763-RA 17..583 17..585 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:49:11 Download gff for BO14453.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7966840..7967004 421..585 98 <- Minus
2R 7967059..7967258 221..420 100 <- Minus
2R 7967319..7967399 140..220 100 <- Minus
2R 7967886..7968008 17..139 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:43:09 Download gff for BO14453.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3854345..3854509 421..585 98 <- Minus
arm_2R 3854564..3854763 221..420 100 <- Minus
arm_2R 3854824..3854904 140..220 100 <- Minus
arm_2R 3855391..3855513 17..139 100   Minus

BO14453.pep Sequence

Translation from 16 to 601

> BO14453.pep
MGDSPEERRSKDVVPETAAKEAETGKGKKEKKEKSAEGTKPRPASSQRGS
LTKSHMGVSLPMGAPAAKPTMRFMPTYRLESKNPLNKERVENIIKAVMNR
HYNDEYMFHPKHSLHMAAQVSEEIKNRIKLDNYDRYRYIVLVTVGEFLMQ
GLYSMVNFLWDAEKDGFVTYSVERPSYFAVCTTFYLYYDASFLDH

BO14453.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:56:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG14763-PC 189 CG14763-PC 1..189 1..189 993 100 Plus
CG14763-PB 189 CG14763-PB 1..189 1..189 993 100 Plus
CG14763-PA 189 CG14763-PA 1..189 1..189 993 100 Plus