Clone Sequence Records
BO14455.3prime Sequence
887 bp (769 high quality bases) assembled on 2006-05-29
> BO14455.3prime
ATGGTCTAGAAAGCTTGCTATAACCGCCTGCTCCACGTAGTTGGCGGGCA
GCATGCCGGTCTTGCCGGTACGCTCCACACGTCCGGTCATCCAGCCGGAA
TCGATTGACTCCACCTCAAAGATGACGTCGCCCTCGCGGAAGCTGACCTC
GTCGACGTCCTGCGCCTCATAGTCATAGATGGCCCGATAGACGCGCATTG
CTGTGCTCTGGCGCGATTGTTTTTCCTGCAGGGAGGAGTAGGATGGCTGC
TGGCGCATCTGCTGTTGCTGCGGCGGGTGCTCCTGCTGCTGCATCATCTG
TACCTGCTGGTAGTACTGCTGGTGCTTCTGCTGCTGGTGAGCCTGCTCGG
CGGCGGTGAGCGATCCGTAGATGCCATTGGCCGGATCAATATCGGAAACC
GAACCAATCCGCTTGGGGTAAACGCTGTTGCCACCTTGATTGCCACGTGG
CTCGGAGCTGTAGACCAAAGTGGTGCTGGACCGTCCGGCATTGGGCACCA
CCCTTGGTCCATCCGTCAGTGGATCGTAGTCCGCTATCTTCCCGATATTG
CTGCCGCCTGCCACGTGCTGTTGCTGCTGGTTCGGCATATGGCCATTGCT
GGCGTGCTGCTTAACGTTTATTGAATTCTCAGATGGAGTCACAGCGGCGT
AATTGGGAGACGCGTATAATTGCTGCAGGTGATTTTGGGCAGCTCCTGGG
CCGGCTGCCACTTGTTGCTTGCTATTGCCATCGTAAGCGACGACACTGGC
CGCCCAGCGTCTCATTTGTGGCGGCAACATTTGGTTCTGCGAGCCGTGTC
CATTATTACTGATGTTGCTGTGGTGGCTGTGCGAAATGCCGCCGTTGCTG
GCATTGTTGTTCAGTAGGCTATGATGGGATTGCTGCT
BO14455.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3849-PB | 1974 | Lasp-RB | 1103..1971 | 887..19 | 4245 | 99.5 | Minus |
| CG3849-PA | 1515 | Lasp-RA | 644..1512 | 887..19 | 4245 | 99.5 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:49:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Lasp-RC | 3189 | CG3849-RC | 1706..2574 | 887..19 | 4285 | 99.5 | Minus |
| Lasp-RA | 2793 | CG3849-RA | 1310..2178 | 887..19 | 4285 | 99.5 | Minus |
| Lasp-RB | 4413 | CG3849-RB | 1769..2637 | 887..19 | 4285 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:49:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16678807..16679263 | 431..887 | 2225 | 99.1 | Plus |
| 3L | 28110227 | 3L | 16678425..16678661 | 196..432 | 1185 | 100 | Plus |
| 3L | 28110227 | 3L | 16678182..16678359 | 19..196 | 890 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 09:49:30 has no hits.
BO14455.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:28:29 Download gff for
BO14455.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lasp-PA | 644..1515 | 15..887 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:24:30 Download gff for
BO14455.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3849-PA | 644..1515 | 15..887 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 04:53:22 Download gff for
BO14455.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lasp-RB | 1769..2640 | 15..887 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:11:03 Download gff for
BO14455.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lasp-RB | 1769..2640 | 15..887 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:11:03 Download gff for
BO14455.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16678179..16678358 | 15..195 | 98 | <- | Plus |
| 3L | 16678425..16678660 | 196..431 | 100 | <- | Plus |
| 3L | 16678808..16679263 | 432..887 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 04:53:22 Download gff for
BO14455.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16671279..16671458 | 15..195 | 98 | <- | Plus |
| arm_3L | 16671525..16671760 | 196..431 | 100 | <- | Plus |
| arm_3L | 16671908..16672363 | 432..887 | 99 | | Plus |
BO14455.5prime Sequence
909 bp (813 high quality bases) assembled on 2006-05-29
> BO14455.5prime
GAAGTTATCAGTCGACATGAATAAAACCTGTGCCCGTTGCCAAAAGGTGG
TTTACCCCATCGAGGAGCTTAAGTGTCTGGACAAAACATGGCACAAAACG
TGTTTCAAATGCACAGAATGCGGCATGACGCTCAATATGAAAACCTACAA
GGGCTACAACAAAATGCCCTACTGCGAGGCACACATCCCGAAGGCGAAGG
CAACGGCCATTGCCGATACGCCCGAATTGAAGCGCATCGCGGAGAACACC
AAAATCCAGTCCAACGTCAAGTACCACGCGGACTTTGAGAAGGCCAAGGG
CAAATTTACACAGGTGGCCGATGACCCGGAAACGCTGCGTATCAAACAGA
ACACGAAGCACATATCGAATGTGGCATATCACGGGGATCTGGAGAAGAAG
GCGGCCATGGAGAAGCAGCGAGGATCCGCCGAGGTCTCCGACAGCAGCAC
AACATCCCAGCAGCAACAGATGCCGCCACCACAGTCGCCGGCGAATCCGC
AGCAGCAGGCGCTCAACAGCTACAACGAGATGCGCTCGGCCATACTCCAG
AACTCGCATCATCCCAGCGGCAATTCCGTGGATCAGTACGACCAGCCACA
GCAGCAGCAACATCAGCCGCAACAGCAGAGCACCAACCCCACGCTGGTGG
CTGCCCAACAGCAGCAATCCCATCATAGCCTACTGAACAACAATGCCAGC
AACGGCGGCATTTCGCACAGCCACCACAGCAACATCAATAATAATGGACA
CGGCTCACAGAACCAAATGTTGCCGCCACAAATGAGACGCTCGGCGGCCA
GTGTCGTCGCCTACGATGGCAATAGCAAGCAACAAGTGGCAGCCGGCCCA
GGAGCTGCCCAAAATCACCTGCAGCAATTATACGCGTCTCCCAATTACGC
CGCTGTGAC
BO14455.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3849-PA | 1515 | Lasp-RA | 1..893 | 17..909 | 4465 | 100 | Plus |
| CG3849-PB | 1974 | Lasp-RB | 893..1352 | 450..909 | 2300 | 100 | Plus |
| CG3849-PB | 1974 | Lasp-RB | 1..433 | 17..449 | 2165 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:58:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Lasp-RA | 2793 | CG3849-RA | 667..1559 | 17..909 | 4465 | 100 | Plus |
| CG43954-RA | 3318 | CG43954-RA | 1559..2018 | 450..909 | 2300 | 100 | Plus |
| Lasp-RC | 3189 | CG3849-RC | 1496..1955 | 450..909 | 2300 | 100 | Plus |
| CG43954-RA | 3318 | CG43954-RA | 667..1099 | 17..449 | 2165 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:58:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16679014..16679473 | 909..450 | 2300 | 100 | Minus |
| 3L | 28110227 | 3L | 16680812..16680951 | 449..310 | 700 | 100 | Minus |
| 3L | 28110227 | 3L | 16681236..16681370 | 315..181 | 675 | 100 | Minus |
| 3L | 28110227 | 3L | 16694202..16694296 | 180..86 | 475 | 100 | Minus |
| 3L | 28110227 | 3L | 16710943..16711011 | 85..17 | 345 | 100 | Minus |
Blast to na_te.dros performed 2015-02-12 00:58:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6919 | 561..766 | 229 | 61.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6763..6921 | 580..737 | 213 | 65.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2450 | 595..744 | 206 | 63.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6916 | 591..781 | 206 | 61.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..7003 | 472..744 | 203 | 57.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2291..2650 | 400..743 | 194 | 56.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6940 | 500..711 | 191 | 59.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2361..2542 | 548..740 | 185 | 59.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6861 | 598..743 | 184 | 61.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6953 | 495..739 | 183 | 58.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2326..2540 | 582..781 | 175 | 58.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2787..3005 | 593..799 | 172 | 60.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2844..2989 | 599..740 | 170 | 62.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2436..2644 | 439..641 | 164 | 59.2 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1093..1151 | 580..637 | 157 | 76.3 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1057..1143 | 589..675 | 155 | 67 | Plus |
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 970..1007 | 591..628 | 136 | 84.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1540..1600 | 582..642 | 134 | 68.9 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1110..1152 | 585..627 | 134 | 79.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2478..2662 | 442..627 | 133 | 58.1 | Plus |
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3286..3437 | 591..744 | 131 | 61.4 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1117..1167 | 580..630 | 120 | 70.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6532..6564 | 595..627 | 111 | 81.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1515..1576 | 578..641 | 108 | 65.6 | Plus |
BO14455.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:28:30 Download gff for
BO14455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lasp-PA | 1..893 | 17..909 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:24:31 Download gff for
BO14455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3849-PA | 1..893 | 17..909 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:34:47 Download gff for
BO14455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lasp-RA | 667..1559 | 17..909 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:41:54 Download gff for
BO14455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lasp-RA | 667..1559 | 17..909 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 04:41:54 Download gff for
BO14455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16679014..16679473 | 450..909 | 100 | <- | Minus |
| 3L | 16680812..16680947 | 314..449 | 100 | <- | Minus |
| 3L | 16681238..16681370 | 181..313 | 100 | <- | Minus |
| 3L | 16694202..16694296 | 86..180 | 100 | <- | Minus |
| 3L | 16710943..16711011 | 17..85 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:34:47 Download gff for
BO14455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16672114..16672573 | 450..909 | 100 | <- | Minus |
| arm_3L | 16673912..16674047 | 314..449 | 100 | <- | Minus |
| arm_3L | 16674338..16674470 | 181..313 | 100 | <- | Minus |
| arm_3L | 16687302..16687396 | 86..180 | 100 | <- | Minus |
| arm_3L | 16704043..16704111 | 17..85 | 100 | | Minus |
BO14455.complete Sequence
1546 bp assembled on 2006-10-11
GenBank Submission: FJ633134
> BO14455.complete
GAAGTTATCAGTCGACATGAATAAAACCTGTGCCCGTTGCCAAAAGGTGG
TTTACCCCATCGAGGAGCTTAAGTGTCTGGACAAAACATGGCACAAAACG
TGTTTCAAATGCACAGAATGCGGCATGACGCTCAATATGAAAACCTACAA
GGGCTACAACAAAATGCCCTACTGCGAGGCACACATCCCGAAGGCGAAGG
CAACGGCCATTGCCGATACGCCCGAATTGAAGCGCATCGCGGAGAACACC
AAAATCCAGTCCAACGTCAAGTACCACGCGGACTTTGAGAAGGCCAAGGG
CAAATTTACACAGGTGGCCGATGACCCGGAAACGCTGCGTATCAAACAGA
ACACGAAGCACATATCGAATGTGGCATATCACGGGGATCTGGAGAAGAAG
GCGGCCATGGAGAAGCAGCGAGGATCCGCCGAGGTCTCCGACAGCAGCAC
AACATCCCAGCAGCAACAGATGCCGCCACCACAGTCGCCGGCGAATCCGC
AGCAGCAGGCGCTCAACAGCTACAACGAGATGCGCTCGGCCATACTCCAG
AACTCGCATCATCCCAGCGGCAATTCCGTGGATCAGTACGACCAGCCACA
GCAGCAGCAACATCAGCCGCAACAGCAGAGCACCAACCCCACGCTGGTGG
CTGCCCAACAGCAGCAATCCCATCATAGCCTACTGAACAACAATGCCAGC
AACGGCGGCATTTCGCACAGCCACCACAGCAACATCAATAATAATGGACA
CGGCTCACAGAACCAAATGTTGCCGCCACAAATGAGACGCTCGGCGGCCA
GTGTCGTCGCTTACGATGGCAATAGCAAGCAACAAGTGGCAGCCGGCCCA
GGAGCTGCCCAAAATCACCTGCAGCAATTATACGCGTCTCCCAATTACGC
CGCTGTGACTCCATCTGAGAATTCAATAAACGTTAAGCAGCACGCCAGCA
ATGGCCATATGCCGAACCAGCAGCAACAGCACGTGGCAGGCGGCAGCAAT
ATCGGGAAGATAGCGGACTACGATCCACTGACGGATGGACCAAGGGTGGT
GCCCAATGCCGGACGGTCCAGCACCACTTTGGTCTACAGCTCCGAGCCAC
GTGGCAATCAAGGTGGCAACAGCGTTTACCCCAAGCGGATTGGTTCGGTT
TCCGATATTGATCCGGCCAATGGCATCTACGGATCGCTCACCGCCGCCGA
GCAGGCTCACCAGCAGCAGAAGCACCAGCAGTACTACCAGCAGGTACAGA
TGATGCAGCAGCAGGAGCACCCGCCGCAGCAACAGCAGATGCGCCAGCAG
CCATCCTACTCCTCCCTGCAGGAAAAACAATCGCGCCAGAGCACAGCAAT
GCGCGTCTATCGGGCCATCTATGACTATGAGGCGCAGGACGTCGACGAGG
TCAGCTTCCGCGAGGGCGACGTCATCTTTGAGGTGGAGTCAATCGATTCC
GGCTGGATGACCGGACGTGTGGAGCGTACCGGCAAGACCGGCATGCTGCC
CGCCAACTACGTGGAGCAGGCGGTTATAGCAAGCTTTCTAGACCAT
BO14455.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:26:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Lasp-RA | 1515 | CG3849-PA | 1..1512 | 17..1528 | 7545 | 99.9 | Plus |
| Lasp-RC | 1911 | CG3849-PC | 830..1908 | 450..1528 | 5380 | 99.9 | Plus |
| Lasp-RB | 1974 | CG3849-PB | 893..1971 | 450..1528 | 5380 | 99.9 | Plus |
| Lasp-RC | 1911 | CG3849-PC | 1..434 | 17..450 | 2170 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:26:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Lasp-RA | 2793 | CG3849-RA | 667..2178 | 17..1528 | 7545 | 99.9 | Plus |
| Lasp-RC | 3189 | CG3849-RC | 1496..2574 | 450..1528 | 5380 | 99.9 | Plus |
| Lasp-RB | 4413 | CG3849-RB | 1559..2637 | 450..1528 | 5380 | 99.9 | Plus |
| Lasp-RC | 3189 | CG3849-RC | 667..1100 | 17..450 | 2170 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:26:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16678807..16679473 | 1116..450 | 3320 | 99.9 | Minus |
| 3L | 28110227 | 3L | 16678425..16678661 | 1351..1115 | 1185 | 100 | Minus |
| 3L | 28110227 | 3L | 16678182..16678359 | 1528..1351 | 890 | 100 | Minus |
| 3L | 28110227 | 3L | 16680812..16680951 | 449..310 | 700 | 100 | Minus |
| 3L | 28110227 | 3L | 16681236..16681370 | 315..181 | 675 | 100 | Minus |
| 3L | 28110227 | 3L | 16694202..16694296 | 180..86 | 475 | 100 | Minus |
| 3L | 28110227 | 3L | 16710943..16711011 | 85..17 | 345 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 08:26:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6919 | 561..766 | 229 | 61.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6763..6921 | 580..737 | 213 | 65.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2450 | 595..744 | 206 | 63.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6916 | 591..781 | 206 | 61.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..7003 | 472..744 | 203 | 57.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6940 | 500..711 | 191 | 59.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6953 | 495..739 | 183 | 58.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2326..2540 | 582..781 | 175 | 58.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2787..3005 | 593..799 | 172 | 60.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2844..2989 | 599..740 | 170 | 62.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2436..2644 | 439..641 | 164 | 59.2 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1093..1151 | 580..637 | 157 | 76.3 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1057..1143 | 589..675 | 155 | 67 | Plus |
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 970..1007 | 591..628 | 136 | 84.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1540..1600 | 582..642 | 134 | 68.9 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1110..1152 | 585..627 | 134 | 79.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2478..2662 | 442..627 | 133 | 58.1 | Plus |
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3286..3437 | 591..744 | 131 | 61.4 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1117..1167 | 580..630 | 120 | 70.6 | Plus |
BO14455.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:36:43 Download gff for
BO14455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lasp-RA | 1..1515 | 17..1532 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:51:41 Download gff for
BO14455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lasp-RA | 642..2153 | 17..1530 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:36 Download gff for
BO14455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lasp-RA | 667..2178 | 17..1530 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:36:46 Download gff for
BO14455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lasp-RA | 642..2156 | 17..1532 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:18:10 Download gff for
BO14455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lasp-RA | 667..2178 | 17..1530 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:18:10 Download gff for
BO14455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16678180..16678358 | 1352..1530 | 98 | <- | Minus |
| 3L | 16678425..16678660 | 1116..1351 | 100 | <- | Minus |
| 3L | 16678808..16679473 | 450..1115 | 99 | <- | Minus |
| 3L | 16680812..16680947 | 314..449 | 100 | <- | Minus |
| 3L | 16681238..16681370 | 181..313 | 100 | <- | Minus |
| 3L | 16694202..16694296 | 86..180 | 100 | <- | Minus |
| 3L | 16710943..16711011 | 17..85 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:36 Download gff for
BO14455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16671280..16671458 | 1352..1530 | 98 | <- | Minus |
| arm_3L | 16671525..16671760 | 1116..1351 | 100 | <- | Minus |
| arm_3L | 16671908..16672573 | 450..1115 | 99 | <- | Minus |
| arm_3L | 16673912..16674047 | 314..449 | 100 | <- | Minus |
| arm_3L | 16674338..16674470 | 181..313 | 100 | <- | Minus |
| arm_3L | 16687302..16687396 | 86..180 | 100 | <- | Minus |
| arm_3L | 16704043..16704111 | 17..85 | 100 | | Minus |
BO14455.pep Sequence
Translation from 16 to 1546
> BO14455.pep
MNKTCARCQKVVYPIEELKCLDKTWHKTCFKCTECGMTLNMKTYKGYNKM
PYCEAHIPKAKATAIADTPELKRIAENTKIQSNVKYHADFEKAKGKFTQV
ADDPETLRIKQNTKHISNVAYHGDLEKKAAMEKQRGSAEVSDSSTTSQQQ
QMPPPQSPANPQQQALNSYNEMRSAILQNSHHPSGNSVDQYDQPQQQQHQ
PQQQSTNPTLVAAQQQQSHHSLLNNNASNGGISHSHHSNINNNGHGSQNQ
MLPPQMRRSAASVVAYDGNSKQQVAAGPGAAQNHLQQLYASPNYAAVTPS
ENSINVKQHASNGHMPNQQQQHVAGGSNIGKIADYDPLTDGPRVVPNAGR
SSTTLVYSSEPRGNQGGNSVYPKRIGSVSDIDPANGIYGSLTAAEQAHQQ
QKHQQYYQQVQMMQQQEHPPQQQQMRQQPSYSSLQEKQSRQSTAMRVYRA
IYDYEAQDVDEVSFREGDVIFEVESIDSGWMTGRVERTGKTGMLPANYVE
QAVIASFLDH
BO14455.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:56:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Lasp-PA | 504 | CG3849-PA | 1..504 | 1..504 | 2662 | 100 | Plus |
| Lasp-PC | 636 | CG3849-PC | 276..636 | 144..504 | 1884 | 99.4 | Plus |
| Lasp-PB | 657 | CG3849-PB | 297..657 | 144..504 | 1884 | 99.4 | Plus |
| Lasp-PC | 636 | CG3849-PC | 1..331 | 1..322 | 850 | 55.9 | Plus |
| Lasp-PB | 657 | CG3849-PB | 1..352 | 1..322 | 838 | 54.5 | Plus |
| Lasp-PD | 282 | CG3849-PD | 1..220 | 1..221 | 828 | 74 | Plus |
| Lasp-PD | 282 | CG3849-PD | 142..282 | 364..504 | 709 | 97.2 | Plus |
| ovo-PC | 1222 | CG6824-PC | 770..1046 | 122..444 | 179 | 26.4 | Plus |
