Clone BO14459 Report

Search the DGRC for BO14459

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:144
Well:59
Vector:pDNR-Dual
Associated Gene/TranscriptCG15676-RA
Protein status:BO14459.pep: validated full length
Sequenced Size:580

Clone Sequence Records

BO14459.3prime Sequence

578 bp (577 high quality bases) assembled on 2006-05-29

> BO14459.3prime
ATGGTCTAGAAAGCTTGCGTTCTCCACTTCATGTTTATACAATACGGCTA
GGTTCATCTCAATCGTGTTCACCTGATCCTGCAGATAGTCGATATCGTGC
TCATGTTGCAATTGCTGCTTCACCAGGCTGGTGATGTCCTTTTTGATGAA
CTCCTCCGCCTCGGACAGCTCGAATTCCATTTGCAGAGATGCGCCCACTT
GAAGGGTAACCTTTTGCACTGGCGGTATGCTCACCCATCTGAATACTCCC
TGTGCGATTTGCACGAGGCTGTGAACTTCCTTGTCAGGATTGTCTATGAA
CCTCCTCACCAATTCCAAATTATTTTTGGCAGCCTCCAAACGGGTTAACA
CTGCTGTGAGGTCAGTCTCCAACTTGGCAGCCAGTTCGCTGTATTGCACA
TAGAAAAGGCGTTGCATCTTCAATGCCGCTGGAACAGTCGAATAGAACTC
TGGCTTGGCGATGTAGCTGACGACATCGTCAACTAACTTGGCCTCTGGGA
TGGGCATAAATGACTTTCGGCCGCCCAGAGGCGGCTTTTTTATGGTGTCT
ATGAATGCAAACATGTCGACTGATAACT

BO14459.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG15676-PA 549 CG15676-RA 1..546 564..19 2730 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 11:32:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG15676-RB 1146 CG15676-RB 30..575 564..19 2730 100 Minus
CG15676-RA 644 CG15676-RA 30..575 564..19 2730 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 11:32:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21671729..21672274 564..19 2730 100 Minus
Blast to na_te.dros performed on 2015-02-06 11:32:35 has no hits.

BO14459.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:28:37 Download gff for BO14459.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15676-PA 1..549 18..564 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:24:41 Download gff for BO14459.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15676-PA 1..549 18..564 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:52:50 Download gff for BO14459.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15676-RA 30..582 13..564 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:34:50 Download gff for BO14459.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15676-RA 30..582 13..564 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:34:50 Download gff for BO14459.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 21671729..21672281 13..564 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:52:50 Download gff for BO14459.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17559234..17559786 13..564 99   Minus

BO14459.5prime Sequence

578 bp (577 high quality bases) assembled on 2006-05-29

> BO14459.5prime
GAAGTTATCAGTCGACATGTTTGCATTCATAGACACCATAAAAAAGCCGC
CTCTGGGCGGCCGAAAGTCATTTATGCCCATCCCAGAGGCCAAGTTAGTT
GACGATGTCGTCAGCTACATCGCCAAGCCAGAGTTCTATTCGACTGTTCC
AGCGGCATTGAAGATGCAACGCCTTTTCTATGTGCAATACAGCGAACTGG
CTGCCAAGTTGGAGACTGACCTCACAGCAGTGTTAACCCGTTTGGAGGCT
GCCAAAAATAATTTGGAATTGGTGAGGAGGTTCATAGACAATCCTGACAA
GGAAGTTCACAGCCTCGTGCAAATCGCACAGGGAGTATTCAGATGGGTGA
GCATACCGCCAGTGCAAAAGGTTACCCTTCAAGTGGGCGCATCTCTGCAA
ATGGAATTCGAGCTGTCCGAGGCGGAGGAGTTCATCAAAAAGGACATCAC
CAGCCTGGTGAAGCAGCAATTGCAACATGAGCACGATATCGACTATCTGC
AGGATCAGGTGAACACGATTGAGATGAACCTAGCCGTATTGTATAAACAT
GAAGTGGAGAACGCAAGCTTTCTAGACC

BO14459.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG15676-PA 549 CG15676-RA 1..546 17..562 2730 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 08:15:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG15676-RB 1146 CG15676-RB 30..575 17..562 2730 100 Plus
CG15676-RA 644 CG15676-RA 30..575 17..562 2730 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 08:15:22
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21671729..21672274 17..562 2730 100 Plus
Blast to na_te.dros performed on 2015-02-02 08:15:25 has no hits.

BO14459.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:28:38 Download gff for BO14459.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15676-PA 1..549 17..563 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:24:42 Download gff for BO14459.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15676-PA 1..549 17..563 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 03:47:19 Download gff for BO14459.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15676-RA 30..582 17..568 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 09:18:51 Download gff for BO14459.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15676-RA 30..582 17..568 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 09:18:51 Download gff for BO14459.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 21671729..21672281 17..568 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:47:19 Download gff for BO14459.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17559234..17559786 17..568 99   Plus

BO14459.complete Sequence

580 bp assembled on 2006-10-11

GenBank Submission: FJ633136

> BO14459.complete
GAAGTTATCAGTCGACATGTTTGCATTCATAGACACCATAAAAAAGCCGC
CTCTGGGCGGCCGAAAGTCATTTATGCCCATCCCAGAGGCCAAGTTAGTT
GACGATGTCGTCAGCTACATCGCCAAGCCAGAGTTCTATTCGACTGTTCC
AGCGGCATTGAAGATGCAACGCCTTTTCTATGTGCAATACAGCGAACTGG
CTGCCAAGTTGGAGACTGACCTCACAGCAGTGTTAACCCGTTTGGAGGCT
GCCAAAAATAATTTGGAATTGGTGAGGAGGTTCATAGACAATCCTGACAA
GGAAGTTCACAGCCTCGTGCAAATCGCACAGGGAGTATTCAGATGGGTGA
GCATACCGCCAGTGCAAAAGGTTACCCTTCAAGTGGGCGCATCTCTGCAA
ATGGAATTCGAGCTGTCCGAGGCGGAGGAGTTCATCAAAAAGGACATCAC
CAGCCTGGTGAAGCAGCAATTGCAACATGAGCACGATATCGACTATCTGC
AGGATCAGGTGAACACGATTGAGATGAACCTAGCCGTATTGTATAAACAT
GAAGTGGAGAACGCAAGCTTTCTAGACCAT

BO14459.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:45:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG15676-RB 549 CG15676-PB 1..546 17..562 2730 100 Plus
CG15676-RA 549 CG15676-PA 1..546 17..562 2730 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:45:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG15676-RB 1146 CG15676-RB 30..575 17..562 2730 100 Plus
CG15676-RA 644 CG15676-RA 30..575 17..562 2730 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:45:50
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21671729..21672274 17..562 2730 100 Plus
Blast to na_te.dros performed on 2014-11-27 08:45:51 has no hits.

BO14459.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:36:50 Download gff for BO14459.complete
Subject Subject Range Query Range Percent Splice Strand
CG15676-RA 1..549 17..563 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:52:06 Download gff for BO14459.complete
Subject Subject Range Query Range Percent Splice Strand
CG15676-RA 30..582 17..568 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:13:20 Download gff for BO14459.complete
Subject Subject Range Query Range Percent Splice Strand
CG15676-RA 36..575 23..564 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:36:50 Download gff for BO14459.complete
Subject Subject Range Query Range Percent Splice Strand
CG15676-RA 30..582 17..568 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:26:00 Download gff for BO14459.complete
Subject Subject Range Query Range Percent Splice Strand
CG15676-RA 36..575 23..564 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:26:00 Download gff for BO14459.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21671735..21672274 23..564 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:13:20 Download gff for BO14459.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17559240..17559779 23..564 99   Plus

BO14459.pep Sequence

Translation from 16 to 580

> BO14459.pep
MFAFIDTIKKPPLGGRKSFMPIPEAKLVDDVVSYIAKPEFYSTVPAALKM
QRLFYVQYSELAAKLETDLTAVLTRLEAAKNNLELVRRFIDNPDKEVHSL
VQIAQGVFRWVSIPPVQKVTLQVGASLQMEFELSEAEEFIKKDITSLVKQ
QLQHEHDIDYLQDQVNTIEMNLAVLYKHEVENASFLDH

BO14459.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:56:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG15676-PB 182 CG15676-PB 1..182 1..182 915 100 Plus
CG15676-PA 182 CG15676-PA 1..182 1..182 915 100 Plus
mgr-PA 194 CG6719-PA 1..180 1..181 209 28.6 Plus