Clone Sequence Records
BO14459.3prime Sequence
578 bp (577 high quality bases) assembled on 2006-05-29
> BO14459.3prime
ATGGTCTAGAAAGCTTGCGTTCTCCACTTCATGTTTATACAATACGGCTA
GGTTCATCTCAATCGTGTTCACCTGATCCTGCAGATAGTCGATATCGTGC
TCATGTTGCAATTGCTGCTTCACCAGGCTGGTGATGTCCTTTTTGATGAA
CTCCTCCGCCTCGGACAGCTCGAATTCCATTTGCAGAGATGCGCCCACTT
GAAGGGTAACCTTTTGCACTGGCGGTATGCTCACCCATCTGAATACTCCC
TGTGCGATTTGCACGAGGCTGTGAACTTCCTTGTCAGGATTGTCTATGAA
CCTCCTCACCAATTCCAAATTATTTTTGGCAGCCTCCAAACGGGTTAACA
CTGCTGTGAGGTCAGTCTCCAACTTGGCAGCCAGTTCGCTGTATTGCACA
TAGAAAAGGCGTTGCATCTTCAATGCCGCTGGAACAGTCGAATAGAACTC
TGGCTTGGCGATGTAGCTGACGACATCGTCAACTAACTTGGCCTCTGGGA
TGGGCATAAATGACTTTCGGCCGCCCAGAGGCGGCTTTTTTATGGTGTCT
ATGAATGCAAACATGTCGACTGATAACT
BO14459.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15676-PA | 549 | CG15676-RA | 1..546 | 564..19 | 2730 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 11:32:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15676-RB | 1146 | CG15676-RB | 30..575 | 564..19 | 2730 | 100 | Minus |
CG15676-RA | 644 | CG15676-RA | 30..575 | 564..19 | 2730 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 11:32:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21671729..21672274 | 564..19 | 2730 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-06 11:32:35 has no hits.
BO14459.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:28:37 Download gff for
BO14459.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15676-PA | 1..549 | 18..564 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:24:41 Download gff for
BO14459.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15676-PA | 1..549 | 18..564 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:52:50 Download gff for
BO14459.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15676-RA | 30..582 | 13..564 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:34:50 Download gff for
BO14459.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15676-RA | 30..582 | 13..564 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:34:50 Download gff for
BO14459.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21671729..21672281 | 13..564 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:52:50 Download gff for
BO14459.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17559234..17559786 | 13..564 | 99 | | Minus |
BO14459.5prime Sequence
578 bp (577 high quality bases) assembled on 2006-05-29
> BO14459.5prime
GAAGTTATCAGTCGACATGTTTGCATTCATAGACACCATAAAAAAGCCGC
CTCTGGGCGGCCGAAAGTCATTTATGCCCATCCCAGAGGCCAAGTTAGTT
GACGATGTCGTCAGCTACATCGCCAAGCCAGAGTTCTATTCGACTGTTCC
AGCGGCATTGAAGATGCAACGCCTTTTCTATGTGCAATACAGCGAACTGG
CTGCCAAGTTGGAGACTGACCTCACAGCAGTGTTAACCCGTTTGGAGGCT
GCCAAAAATAATTTGGAATTGGTGAGGAGGTTCATAGACAATCCTGACAA
GGAAGTTCACAGCCTCGTGCAAATCGCACAGGGAGTATTCAGATGGGTGA
GCATACCGCCAGTGCAAAAGGTTACCCTTCAAGTGGGCGCATCTCTGCAA
ATGGAATTCGAGCTGTCCGAGGCGGAGGAGTTCATCAAAAAGGACATCAC
CAGCCTGGTGAAGCAGCAATTGCAACATGAGCACGATATCGACTATCTGC
AGGATCAGGTGAACACGATTGAGATGAACCTAGCCGTATTGTATAAACAT
GAAGTGGAGAACGCAAGCTTTCTAGACC
BO14459.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15676-PA | 549 | CG15676-RA | 1..546 | 17..562 | 2730 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 08:15:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15676-RB | 1146 | CG15676-RB | 30..575 | 17..562 | 2730 | 100 | Plus |
CG15676-RA | 644 | CG15676-RA | 30..575 | 17..562 | 2730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 08:15:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21671729..21672274 | 17..562 | 2730 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 08:15:25 has no hits.
BO14459.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:28:38 Download gff for
BO14459.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15676-PA | 1..549 | 17..563 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:24:42 Download gff for
BO14459.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15676-PA | 1..549 | 17..563 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 03:47:19 Download gff for
BO14459.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15676-RA | 30..582 | 17..568 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 09:18:51 Download gff for
BO14459.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15676-RA | 30..582 | 17..568 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 09:18:51 Download gff for
BO14459.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21671729..21672281 | 17..568 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:47:19 Download gff for
BO14459.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17559234..17559786 | 17..568 | 99 | | Plus |
BO14459.complete Sequence
580 bp assembled on 2006-10-11
GenBank Submission: FJ633136
> BO14459.complete
GAAGTTATCAGTCGACATGTTTGCATTCATAGACACCATAAAAAAGCCGC
CTCTGGGCGGCCGAAAGTCATTTATGCCCATCCCAGAGGCCAAGTTAGTT
GACGATGTCGTCAGCTACATCGCCAAGCCAGAGTTCTATTCGACTGTTCC
AGCGGCATTGAAGATGCAACGCCTTTTCTATGTGCAATACAGCGAACTGG
CTGCCAAGTTGGAGACTGACCTCACAGCAGTGTTAACCCGTTTGGAGGCT
GCCAAAAATAATTTGGAATTGGTGAGGAGGTTCATAGACAATCCTGACAA
GGAAGTTCACAGCCTCGTGCAAATCGCACAGGGAGTATTCAGATGGGTGA
GCATACCGCCAGTGCAAAAGGTTACCCTTCAAGTGGGCGCATCTCTGCAA
ATGGAATTCGAGCTGTCCGAGGCGGAGGAGTTCATCAAAAAGGACATCAC
CAGCCTGGTGAAGCAGCAATTGCAACATGAGCACGATATCGACTATCTGC
AGGATCAGGTGAACACGATTGAGATGAACCTAGCCGTATTGTATAAACAT
GAAGTGGAGAACGCAAGCTTTCTAGACCAT
BO14459.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:45:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15676-RB | 549 | CG15676-PB | 1..546 | 17..562 | 2730 | 100 | Plus |
CG15676-RA | 549 | CG15676-PA | 1..546 | 17..562 | 2730 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:45:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15676-RB | 1146 | CG15676-RB | 30..575 | 17..562 | 2730 | 100 | Plus |
CG15676-RA | 644 | CG15676-RA | 30..575 | 17..562 | 2730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:45:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21671729..21672274 | 17..562 | 2730 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:45:51 has no hits.
BO14459.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:36:50 Download gff for
BO14459.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15676-RA | 1..549 | 17..563 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:52:06 Download gff for
BO14459.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15676-RA | 30..582 | 17..568 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:13:20 Download gff for
BO14459.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15676-RA | 36..575 | 23..564 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:36:50 Download gff for
BO14459.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15676-RA | 30..582 | 17..568 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:26:00 Download gff for
BO14459.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15676-RA | 36..575 | 23..564 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:26:00 Download gff for
BO14459.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21671735..21672274 | 23..564 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:13:20 Download gff for
BO14459.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17559240..17559779 | 23..564 | 99 | | Plus |
BO14459.pep Sequence
Translation from 16 to 580
> BO14459.pep
MFAFIDTIKKPPLGGRKSFMPIPEAKLVDDVVSYIAKPEFYSTVPAALKM
QRLFYVQYSELAAKLETDLTAVLTRLEAAKNNLELVRRFIDNPDKEVHSL
VQIAQGVFRWVSIPPVQKVTLQVGASLQMEFELSEAEEFIKKDITSLVKQ
QLQHEHDIDYLQDQVNTIEMNLAVLYKHEVENASFLDH
BO14459.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:56:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15676-PB | 182 | CG15676-PB | 1..182 | 1..182 | 915 | 100 | Plus |
CG15676-PA | 182 | CG15676-PA | 1..182 | 1..182 | 915 | 100 | Plus |
mgr-PA | 194 | CG6719-PA | 1..180 | 1..181 | 209 | 28.6 | Plus |