Clone BO14463 Report

Search the DGRC for BO14463

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:144
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptTektin-C-RA
Protein status:BO14463.pep: validated full length
Sequenced Size:1297

Clone Sequence Records

BO14463.3prime Sequence

769 bp (766 high quality bases) assembled on 2006-05-29

> BO14463.3prime
ATGGTCTAGAAAGCTTGCAAATGTTTGGTACTTCAGGGCCTGTCGCAGGG
TCATGCAGTCGACCTCGTCGATCTTGCAGGTGTTCGCCTTGATGTTGATC
TCCTCCTCCTGCATCACCTGGACGTGCATCAGGTAGCGCATGGATGCCTT
GTTCTCGTTCAGCTTCTGATTGAGCTTGCATACGGATGCCTTCAGCGCCT
GCAGTTCGTTGTAAAGCGCATCCTGGACCATGTCGCAGGTCAGCTCCAGG
CCAGGACGATGGGCGCGATTGCTGAGCCGCGTCTGGCACAGTGTAATGGC
CCGCTGCTTGTCCATCATCTCCTTCTCCAGCTCGGTCATGTTGCGCTGCA
CCTGATGGATGTGATCCATGGTGTCCTTGTGCTTGTTCTCCAAACACTGT
TTCACGTGCTTCGTCTCCGAGATCCTTCGCTCGAAGGCCTCGTTGGTCCT
GTCCGTCTGGTTCTGCATATCCTCGCACACCTGCTTCAGCAGCAAATCGA
TGTAGGCCCGCAGCTGACCGGCGGACACCAGCGCCTTGGCGTTGGCCTCC
AGATTCTCGTACGTCTGCGCCTGCCACTCGGTCAGCGAAAATTGGCAATG
CTGTTTGGACAAATCCTGTCCCTTAGCCAGGTCGTGCTGGAACTCCTTGA
GCTTCAGGTTCTTCTCGTCGATGGCCAGTGACTTATCCTTGGCGGCCAAA
TCCTGATCGAGCAGATAGATGGCGGCCCGCAGCTTGCGGATCTGCTCCTC
GGCTTCCTTGAGGGCGGCA

BO14463.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG10541-PA 1266 Tektin-C-RA 513..1263 769..19 3630 99.3 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:28:46
Subject Length Description Subject Range Query Range Score Percent Strand
Tektin-C-RD 1613 CG10541-RD 701..1451 769..19 3680 99.3 Minus
Tektin-C-RC 1549 CG10541-RC 637..1387 769..19 3680 99.3 Minus
Tektin-C-RA 1524 CG10541-RA 612..1362 769..19 3680 99.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:28:41
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 5794567..5795144 19..596 2860 99.7 Plus
3L 28110227 3L 5795549..5795722 596..769 825 98.3 Plus
Blast to na_te.dros performed on 2015-02-12 18:28:43 has no hits.

BO14463.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:28:43 Download gff for BO14463.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10541-PA 514..1266 18..768 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:24:49 Download gff for BO14463.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10541-PA 514..1266 18..768 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:53:26 Download gff for BO14463.3prime
Subject Subject Range Query Range Percent Splice Strand
Tektin-C-RA 613..1362 19..768 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:07:14 Download gff for BO14463.3prime
Subject Subject Range Query Range Percent Splice Strand
Tektin-C-RA 613..1362 19..768 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:07:14 Download gff for BO14463.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 5794567..5795143 19..595 99 <- Plus
3L 5795549..5795721 596..768 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:53:26 Download gff for BO14463.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 5787667..5788243 19..595 99 <- Plus
arm_3L 5788649..5788821 596..768 98   Plus

BO14463.5prime Sequence

923 bp (750 high quality bases) assembled on 2006-05-29

> BO14463.5prime
GAAGTTATCAGTCGACATGTTGCCCAACCTGAAGTCGCGCCGCATCAGCG
GCCTGCAGCTGGCCGGGAAGCACCTGGGTCCGGTGGCCAAGTGCCCGCCC
AGATATTCCGAGGAGGACTGGGACTATAACAACAAGATCAAGTTTCGAAT
CACCTGCGACCAGGAGAAGCTGGCGGAGCGGATCGTGGAGGAGTCGCGTC
GCGTGGTGGACGAAACGAAGGACACCACCAAGAACTGGCAACGGGAGGTG
GAGCACCATATGCGCGAACGGACGAGCGAAATCCGATTCCTGGTGGACGA
GTTGAATCGCCAGAAGAAGACCGCCGCCCTGGAGGATGAGGCCTTGAACA
CCTATCGCAATCGCGTGCTGAACTGCATCGAGTTCCTGAAGGACAAGTCG
CTGGCCATTTGCAAGCAGTGCCTGATCCTACGCGAAGGTCGGATCGGTGT
GGATTTGTGCGACGACGAGGTGGACCGCTCGCTGCGCCGTGAGCTCAAGG
TGATCAAGGGCTGTCAGGGATTGGCCGATGCCGCCCTCAAGGAAGCCGAG
GAGCAGATCCGCAAGCTGCGCGCCGCCATCTATCTGCTCGATCAGGATTT
GGCCGCCAAGGATAAGTCACTGGCCATCGACGAGAAGAACCTGAAGCTCA
AGGAGTTCCAGCACGACCTGGCTAAGGGACAGGATTTGTCCAAACAGCAT
TGCCAATTTTCGCTGACCGAGTGGCAGGCGCAAACGTACGAGAATCTGGA
GGCCAACGCCAAGGCGCTGGTGTCCGCCGGTCAGCTGCGGGCCTACATCG
ATTTGCTGCTGAAGCAGGTGTGCGAGGATATGCAGAACCAGACGGACAGG
ACCAACGAGGCCTTCGAGCGAAGGATCTCGGAAACGAAGCACGTGAAACA
GGGTTTGGAGAACAAGCACAAGG

BO14463.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG10541-PA 1266 Tektin-C-RA 1..907 17..923 4310 99 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:26:24
Subject Length Description Subject Range Query Range Score Percent Strand
Tektin-C-RD 1613 CG10541-RD 187..1095 15..923 4410 99 Plus
Tektin-C-RC 1549 CG10541-RC 123..1031 15..923 4410 99 Plus
Tektin-C-RA 1524 CG10541-RA 98..1006 15..923 4410 99 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:26:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 5795549..5796061 702..190 2505 99.2 Minus
3L 28110227 3L 5794923..5795144 923..702 1035 97.7 Minus
3L 28110227 3L 5796129..5796304 190..15 880 100 Minus
Blast to na_te.dros performed on 2015-02-12 05:26:22 has no hits.

BO14463.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:28:44 Download gff for BO14463.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10541-PA 1..907 17..923 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:24:50 Download gff for BO14463.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10541-PA 1..907 17..923 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 02:56:40 Download gff for BO14463.5prime
Subject Subject Range Query Range Percent Splice Strand
Tektin-C-RA 94..1006 10..923 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:25:17 Download gff for BO14463.5prime
Subject Subject Range Query Range Percent Splice Strand
Tektin-C-RA 94..1006 10..923 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:25:17 Download gff for BO14463.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 5794923..5795143 703..923 97 <- Minus
3L 5795549..5796061 190..702 99 <- Minus
3L 5796130..5796308 10..189 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 02:56:40 Download gff for BO14463.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 5788023..5788243 703..923 97 <- Minus
arm_3L 5788649..5789161 190..702 99 <- Minus
arm_3L 5789230..5789408 10..189 98   Minus

BO14463.complete Sequence

1297 bp assembled on 2006-10-11

GenBank Submission: FJ633138

> BO14463.complete
GAAGTTATCAGTCGACATGTTGCCCAACCTGAAGTCGCGCCGCATCAGCG
GCCTGCAGCTGGCCGGGAAGCACCTGGGTCCGGTGGCCAAGTGCCCGCCC
AGATATTCCGAGGAGGACTGGGACTATAACAACAAGATCAAGTTTCGAAT
CACCTGCGACCAGGAGAAGCTGGCGGAGCGGATCGTGGAGGAGTCGCGTC
GCGTGGTGGACGAAACGAAGGACACCACCAAGAACTGGCAACGGGAGGTG
GAGCACCATATGCGCGAACGGACGAGCGAAATCCGATTCCTGGTGGACGA
GTTGAATCGCCAGAAGAAGACCGCCGCCCTGGAGGATGAGGCCTTGAACA
CCTATCGCAATCGCGTGCTGAACTGCATCGAGTTCCTGAAGGACAAGTCG
CTGGCCATTTGCAAGCAGTGCCTGATCCTACGCGAAGGTCGGATCGGTGT
GGATTTGTGCGACGACGAGGTGGACCGCTCGCTGCGCCGTGAGCTCAAGG
TGATCAAGGGCTGTCAGGGATTGGCCGATGCCGCCCTCAAGGAAGCCGAG
GAGCAGATCCGCAAGCTGCGCGCCGCCATCTATCTGCTCGATCAGGATTT
GGCCGCCAAGGATAAGTCACTGGCCATCGACGAGAAGAACCTGAAGCTCA
AGGAGTTCCAGCACGACCTGGCTAAGGGACAGGATTTGTCCAAACAGCAT
TGCCAATTTTCGCTGACCGAGTGGCAGGCGCAGACGTACGAGAATCTGGA
GGCCAACGCCAAGGCGCTGGTGTCCGCCGGTCAGCTGCGGGCCTACATCG
ATTTGCTGCTGAAGCAGGTGTGCGAGGATATGCAGAACCAGACGGACAGG
ACCAACGAGGCCTTCGAGCGAAGGATCTCGGAGACGAAGCACGTGAAACA
GTGTTTGGAGAACAAGCACAAGGACACCATGGATCACATCCATCAGGTGC
AGCGCAACATGACCGAGCTGGAGAAGGAGATGATGGACAAGCAGCGGGCC
ATTACACTGTGCCAGACGCGGCTCAGCAATCGCGCCCATCGTCCTGGCCT
GGAGCTGACCTGCGACATGGTCCAGGATGCGCTTTACAACGAACTGCAGG
CGCTGAAGGCATCCGTATGCAAGCTCAATCAGAAGCTGAACGAGAACAAG
GCATCCATGCGCTACCTGATGCACGTCCAGGTGATGCAGGAGGAGGAGAT
CAACATCAAGGCGAACACCTGCAAGATCGACGAGGTCGACTGCATGACCC
TGCGACAGGCCCTGAAGTACCAAACATTTGCAAGCTTTCTAGACCAT

BO14463.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 02:04:20
Subject Length Description Subject Range Query Range Score Percent Strand
Tektin-C-RD 1266 CG10541-PD 1..1263 17..1279 6225 99.5 Plus
Tektin-C-RC 1266 CG10541-PC 1..1263 17..1279 6225 99.5 Plus
Tektin-C-RA 1266 CG10541-PA 1..1263 17..1279 6225 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:04:22
Subject Length Description Subject Range Query Range Score Percent Strand
Tektin-C-RD 1613 CG10541-RD 187..1451 15..1279 6235 99.5 Plus
Tektin-C-RC 1549 CG10541-RC 123..1387 15..1279 6235 99.5 Plus
Tektin-C-RA 1524 CG10541-RA 98..1362 15..1279 6235 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 02:04:17
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 5794567..5795144 1279..702 2860 99.7 Minus
3L 28110227 3L 5795549..5796061 702..190 2505 99.2 Minus
3L 28110227 3L 5796129..5796304 190..15 880 100 Minus
Blast to na_te.dros performed on 2014-11-27 02:04:19 has no hits.

BO14463.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:36:14 Download gff for BO14463.complete
Subject Subject Range Query Range Percent Splice Strand
Tektin-C-RB 142..1413 10..1280 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:51:42 Download gff for BO14463.complete
Subject Subject Range Query Range Percent Splice Strand
Tektin-C-RB 142..1410 10..1279 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:08:42 Download gff for BO14463.complete
Subject Subject Range Query Range Percent Splice Strand
Tektin-C-RA 105..1362 22..1281 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:36:14 Download gff for BO14463.complete
Subject Subject Range Query Range Percent Splice Strand
Tektin-C-RB 142..1410 10..1279 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:36:56 Download gff for BO14463.complete
Subject Subject Range Query Range Percent Splice Strand
Tektin-C-RA 105..1362 22..1281 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:36:56 Download gff for BO14463.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5794565..5795143 703..1281 99 <- Minus
3L 5795549..5796061 190..702 99 <- Minus
3L 5796130..5796297 22..189 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:08:42 Download gff for BO14463.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 5787665..5788243 703..1281 99 <- Minus
arm_3L 5788649..5789161 190..702 99 <- Minus
arm_3L 5789230..5789397 22..189 100   Minus

BO14463.pep Sequence

Translation from 16 to 1297

> BO14463.pep
MLPNLKSRRISGLQLAGKHLGPVAKCPPRYSEEDWDYNNKIKFRITCDQE
KLAERIVEESRRVVDETKDTTKNWQREVEHHMRERTSEIRFLVDELNRQK
KTAALEDEALNTYRNRVLNCIEFLKDKSLAICKQCLILREGRIGVDLCDD
EVDRSLRRELKVIKGCQGLADAALKEAEEQIRKLRAAIYLLDQDLAAKDK
SLAIDEKNLKLKEFQHDLAKGQDLSKQHCQFSLTEWQAQTYENLEANAKA
LVSAGQLRAYIDLLLKQVCEDMQNQTDRTNEAFERRISETKHVKQCLENK
HKDTMDHIHQVQRNMTELEKEMMDKQRAITLCQTRLSNRAHRPGLELTCD
MVQDALYNELQALKASVCKLNQKLNENKASMRYLMHVQVMQEEEINIKAN
TCKIDEVDCMTLRQALKYQTFASFLDH

BO14463.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:56:49
Subject Length Description Subject Range Query Range Score Percent Strand
Tektin-C-PD 421 CG10541-PD 1..421 1..421 2176 100 Plus
Tektin-C-PC 421 CG10541-PC 1..421 1..421 2176 100 Plus
Tektin-C-PA 421 CG10541-PA 1..421 1..421 2176 100 Plus
CG32820-PB 520 CG32820-PB 125..511 29..415 375 26.2 Plus
CG32819-PB 520 CG32819-PB 125..511 29..415 375 26.2 Plus