Clone Sequence Records
BO14465.3prime Sequence
753 bp (751 high quality bases) assembled on 2006-05-29
> BO14465.3prime
ATGGTCTAGAAAGCTTGCGGGAATGGGTGTTTGGGATTCCTCGACGGTTC
GCAGCCATGCACAGTTAAGGATCTCGCGTAGATTCCAGCGAGCATGTGCC
TCCGGTTCGAGCAGCACTGAAACAGTGGCCTTCGCCTGGGCCGATATCGT
TTCCTGCAGCTTCCGGCGAAAGGCAAACTTGCGGTTACGCTGATCCTCCA
GCAATTTGGTCAAGTTACTGTCATCGAAAGGCATCTTGGCATTCATCATG
ATGAACAGAATGACTCCCAAGGACCAGGCGTCCGCTAGCTTTGGATCATA
TGGTCGTCCACAAACTACTTCAGGTGCAGCATAAGCAGCTGATCCGCAGT
ATGTCTCAGATTTCATCTCCCGGCCATTATCGTCGCGACAATAGCGAGCA
AATCCGAAATCGGCCAGCTTGATGTTGAGCCGCTTGGAGAGAAGAATGTT
CTCGCACTTGAGATCCCGATGGGCAATGTCCAGGTTGTGCAGATACTTCA
GTGCCTTGGACATCTGAAAGAACCAGATCTTCGATTGCTTCTCATCGATG
GGACCCGACCTCTTGATGTGCGACAACAAATCCCCATTCTCTGCGTAACG
CATAAAGATGAAGATCTTGGGACCGCGCTGAAGGATGCTATGGATCTGAA
TAATGTTGGAATGATCAATCTTTGTCAGGATCTCCAGTTCGCGCGGAAAG
AACTTGTTCACGAAATCAGTGGGCGCCTTGGCTTTGTCAATGATTTTACA
GGC
BO14465.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14305-PA | 909 | CG14305-RA | 172..906 | 753..19 | 3675 | 100 | Minus |
CG14305-PB | 909 | CG14305-RB | 172..906 | 753..19 | 3675 | 100 | Minus |
CG14305-PC | 909 | CG14305-RC | 172..906 | 753..19 | 3675 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:10:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14305-RD | 1263 | CG14305-RD | 302..1036 | 753..19 | 3675 | 100 | Minus |
CG14305-RC | 1407 | CG14305-RC | 446..1180 | 753..19 | 3675 | 100 | Minus |
CG14305-RA | 1281 | CG14305-RA | 320..1054 | 753..19 | 3675 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:10:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18599136..18599870 | 753..19 | 3675 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-03 06:10:09 has no hits.
BO14465.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:28:47 Download gff for
BO14465.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14305-PC | 172..909 | 18..753 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:24:55 Download gff for
BO14465.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14305-PC | 172..909 | 18..753 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:21:04 Download gff for
BO14465.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14305-RA | 320..1054 | 19..753 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 09:36:36 Download gff for
BO14465.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14305-RA | 320..1054 | 19..753 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 09:36:36 Download gff for
BO14465.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18599136..18599870 | 19..753 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:21:04 Download gff for
BO14465.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14424858..14425592 | 19..753 | 100 | | Minus |
BO14465.5prime Sequence
808 bp (729 high quality bases) assembled on 2006-05-29
> BO14465.5prime
GAAGTTATCAGTCGACATGTCCAAATACAATTCTAGCGCTGGGATCCGTC
AGTTGGGTACTCGAAGTTCGGATGTGGATGCACTGGCACAGCGGGGCTAC
AATGTTGGTCACAAGATCGGCGAGGGGTCTTATGCCACTGTTATAACCGC
CGGTTATGCCGATGATCATGGACATGGAGTACATTTGGCCTGTAAAATCA
TTGACAAAGCCAAGGCGCCCACTGATTTCGTGAACAAGTTCTTTCCGCGC
GAACTGGAGATCCTGACAAAGATTGATCATTCCAACATTATTCAGATCCA
TAGCATCCTTCAGCGCGGTCCCAAGATCTTCATCTTTATGCGTTACGCAG
AGAATGGGGATTTGTTGTCGCACATCAAGAGGTCGGGTCCCATCGATGAG
AAGCAATCGAAGATCTGGTTCTTTCAGATGTCCAAGGCACTGAAGTATCT
GCACAACCTGGACATTGCCCATCGGGATCTCAAGTGCGAGAACATTCTTC
TCTCCAAGCGGCTCAACATCAAGCTGGCCGATTTCGGATTTGCTCGCTAT
TGTCGCGACGATAATGGCCGGGAGATGAAATCTGAGACATACTGCGGATC
AGCTGCTTATGCTGCACCTGAAGTAGTTTGTGGACGACCATATGATCCAA
AGCTAGCGGACGCCTGGTCCTTGGGAGTCATTCTGTTCATCATGATGAAT
GCCAAGATGCCTTTCGATGACAGTAACTTGACCAAATTGCTGGAGGATCA
GCGTAACCGCAAGTTTGCCTTTCGCCGGAAGCTGCAAGAAACGATATCGG
CCCAGGCG
BO14465.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14305-PA | 909 | CG14305-RA | 1..792 | 17..808 | 3910 | 99.7 | Plus |
CG14305-PB | 909 | CG14305-RB | 1..792 | 17..808 | 3910 | 99.7 | Plus |
CG14305-PC | 909 | CG14305-RC | 1..792 | 17..808 | 3910 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:10:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14305-RD | 1263 | CG14305-RD | 130..922 | 16..808 | 3935 | 99.7 | Plus |
CG14305-RC | 1407 | CG14305-RC | 274..1066 | 16..808 | 3935 | 99.7 | Plus |
CG14305-RA | 1281 | CG14305-RA | 148..940 | 16..808 | 3935 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:10:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18598964..18599756 | 16..808 | 3935 | 99.7 | Plus |
Blast to na_te.dros performed on 2015-02-11 16:10:32 has no hits.
BO14465.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:28:49 Download gff for
BO14465.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14305-PC | 1..792 | 17..808 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:24:57 Download gff for
BO14465.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14305-PC | 1..792 | 17..808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 13:59:47 Download gff for
BO14465.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14305-RA | 143..940 | 10..808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:47:59 Download gff for
BO14465.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14305-RA | 143..940 | 10..808 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:47:59 Download gff for
BO14465.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18598959..18599756 | 10..808 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 13:59:47 Download gff for
BO14465.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14424681..14425478 | 10..808 | 99 | | Plus |
BO14465.complete Sequence
940 bp assembled on 2006-10-11
GenBank Submission: FJ633139
> BO14465.complete
GAAGTTATCAGTCGACATGTCCAAATACAATTCTAGCGCTGGGATCCGTC
AGTTGGGTACTCGAAGTTCGGATGTGGATGCACTGGCACAGCGGGGCTAC
AATGTTGGTCACAAGATCGGCGAGGGGTCTTATGCCACTGTTATAACCGC
CGGTTATGCCGATGATCATGGACATGGAGTACATTTGGCCTGTAAAATCA
TTGACAAAGCCAAGGCGCCCACTGATTTCGTGAACAAGTTCTTTCCGCGC
GAACTGGAGATCCTGACAAAGATTGATCATTCCAACATTATTCAGATCCA
TAGCATCCTTCAGCGCGGTCCCAAGATCTTCATCTTTATGCGTTACGCAG
AGAATGGGGATTTGTTGTCGCACATCAAGAGGTCGGGTCCCATCGATGAG
AAGCAATCGAAGATCTGGTTCTTTCAGATGTCCAAGGCACTGAAGTATCT
GCACAACCTGGACATTGCCCATCGGGATCTCAAGTGCGAGAACATTCTTC
TCTCCAAGCGGCTCAACATCAAGCTGGCCGATTTCGGATTTGCTCGCTAT
TGTCGCGACGATAATGGCCGGGAGATGAAATCTGAGACATACTGCGGATC
AGCTGCTTATGCTGCACCTGAAGTAGTTTGTGGACGACCATATGATCCAA
AGCTAGCGGACGCCTGGTCCTTGGGAGTCATTCTGTTCATCATGATGAAT
GCCAAGATGCCTTTCGATGACAGTAACTTGACCAAATTGCTGGAGGATCA
GCGTAACCGCAAGTTTGCCTTTCGCCGGAAGCTGCAGGAAACGATATCGG
CCCAGGCGAAGGCCACTGTTTCAGTGCTGCTCGAACCGGAGGCACATGCT
CGCTGGAATCTACGCGAGATCCTTAACTGTGCATGGCTGCGAACCGTCGA
GGAATCCCAAACACCCATTCCCGCAAGCTTTCTAGACCAT
BO14465.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:54:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14305-RD | 909 | CG14305-PD | 1..906 | 17..922 | 4515 | 99.9 | Plus |
CG14305-RC | 909 | CG14305-PC | 1..906 | 17..922 | 4515 | 99.9 | Plus |
CG14305-RA | 909 | CG14305-PA | 1..906 | 17..922 | 4515 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:54:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14305-RD | 1263 | CG14305-RD | 130..1036 | 16..922 | 4520 | 99.9 | Plus |
CG14305-RC | 1407 | CG14305-RC | 274..1180 | 16..922 | 4520 | 99.9 | Plus |
CG14305-RA | 1281 | CG14305-RA | 148..1054 | 16..922 | 4520 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:54:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18598964..18599870 | 16..922 | 4520 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:54:52 has no hits.
BO14465.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:36:16 Download gff for
BO14465.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14305-RC | 1..909 | 17..923 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:51:45 Download gff for
BO14465.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14305-RC | 153..1064 | 10..922 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:54:13 Download gff for
BO14465.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14305-RA | 149..1054 | 17..924 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:36:16 Download gff for
BO14465.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14305-RC | 153..1064 | 10..922 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:07:12 Download gff for
BO14465.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14305-RA | 149..1054 | 17..924 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:07:12 Download gff for
BO14465.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18598965..18599870 | 17..924 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:54:13 Download gff for
BO14465.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14424687..14425592 | 17..924 | 99 | | Plus |
BO14465.pep Sequence
Translation from 16 to 940
> BO14465.pep
MSKYNSSAGIRQLGTRSSDVDALAQRGYNVGHKIGEGSYATVITAGYADD
HGHGVHLACKIIDKAKAPTDFVNKFFPRELEILTKIDHSNIIQIHSILQR
GPKIFIFMRYAENGDLLSHIKRSGPIDEKQSKIWFFQMSKALKYLHNLDI
AHRDLKCENILLSKRLNIKLADFGFARYCRDDNGREMKSETYCGSAAYAA
PEVVCGRPYDPKLADAWSLGVILFIMMNAKMPFDDSNLTKLLEDQRNRKF
AFRRKLQETISAQAKATVSVLLEPEAHARWNLREILNCAWLRTVEESQTP
IPASFLDH
BO14465.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:56:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14305-PD | 302 | CG14305-PD | 1..302 | 1..302 | 1582 | 100 | Plus |
CG14305-PC | 302 | CG14305-PC | 1..302 | 1..302 | 1582 | 100 | Plus |
CG14305-PA | 302 | CG14305-PA | 1..302 | 1..302 | 1582 | 100 | Plus |
CG9222-PA | 337 | CG9222-PA | 71..332 | 23..290 | 482 | 36.4 | Plus |
Sik3-PA | 702 | CG15072-PA | 27..292 | 15..291 | 395 | 33.8 | Plus |