Clone BO14465 Report

Search the DGRC for BO14465

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:144
Well:65
Vector:pDNR-Dual
Associated Gene/TranscriptCG14305-RA
Protein status:BO14465.pep: validated full length
Sequenced Size:940

Clone Sequence Records

BO14465.3prime Sequence

753 bp (751 high quality bases) assembled on 2006-05-29

> BO14465.3prime
ATGGTCTAGAAAGCTTGCGGGAATGGGTGTTTGGGATTCCTCGACGGTTC
GCAGCCATGCACAGTTAAGGATCTCGCGTAGATTCCAGCGAGCATGTGCC
TCCGGTTCGAGCAGCACTGAAACAGTGGCCTTCGCCTGGGCCGATATCGT
TTCCTGCAGCTTCCGGCGAAAGGCAAACTTGCGGTTACGCTGATCCTCCA
GCAATTTGGTCAAGTTACTGTCATCGAAAGGCATCTTGGCATTCATCATG
ATGAACAGAATGACTCCCAAGGACCAGGCGTCCGCTAGCTTTGGATCATA
TGGTCGTCCACAAACTACTTCAGGTGCAGCATAAGCAGCTGATCCGCAGT
ATGTCTCAGATTTCATCTCCCGGCCATTATCGTCGCGACAATAGCGAGCA
AATCCGAAATCGGCCAGCTTGATGTTGAGCCGCTTGGAGAGAAGAATGTT
CTCGCACTTGAGATCCCGATGGGCAATGTCCAGGTTGTGCAGATACTTCA
GTGCCTTGGACATCTGAAAGAACCAGATCTTCGATTGCTTCTCATCGATG
GGACCCGACCTCTTGATGTGCGACAACAAATCCCCATTCTCTGCGTAACG
CATAAAGATGAAGATCTTGGGACCGCGCTGAAGGATGCTATGGATCTGAA
TAATGTTGGAATGATCAATCTTTGTCAGGATCTCCAGTTCGCGCGGAAAG
AACTTGTTCACGAAATCAGTGGGCGCCTTGGCTTTGTCAATGATTTTACA
GGC

BO14465.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG14305-PA 909 CG14305-RA 172..906 753..19 3675 100 Minus
CG14305-PB 909 CG14305-RB 172..906 753..19 3675 100 Minus
CG14305-PC 909 CG14305-RC 172..906 753..19 3675 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:10:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG14305-RD 1263 CG14305-RD 302..1036 753..19 3675 100 Minus
CG14305-RC 1407 CG14305-RC 446..1180 753..19 3675 100 Minus
CG14305-RA 1281 CG14305-RA 320..1054 753..19 3675 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:10:04
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18599136..18599870 753..19 3675 100 Minus
Blast to na_te.dros performed on 2015-02-03 06:10:09 has no hits.

BO14465.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:28:47 Download gff for BO14465.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14305-PC 172..909 18..753 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:24:55 Download gff for BO14465.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14305-PC 172..909 18..753 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:21:04 Download gff for BO14465.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14305-RA 320..1054 19..753 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 09:36:36 Download gff for BO14465.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14305-RA 320..1054 19..753 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 09:36:36 Download gff for BO14465.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 18599136..18599870 19..753 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:21:04 Download gff for BO14465.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14424858..14425592 19..753 100   Minus

BO14465.5prime Sequence

808 bp (729 high quality bases) assembled on 2006-05-29

> BO14465.5prime
GAAGTTATCAGTCGACATGTCCAAATACAATTCTAGCGCTGGGATCCGTC
AGTTGGGTACTCGAAGTTCGGATGTGGATGCACTGGCACAGCGGGGCTAC
AATGTTGGTCACAAGATCGGCGAGGGGTCTTATGCCACTGTTATAACCGC
CGGTTATGCCGATGATCATGGACATGGAGTACATTTGGCCTGTAAAATCA
TTGACAAAGCCAAGGCGCCCACTGATTTCGTGAACAAGTTCTTTCCGCGC
GAACTGGAGATCCTGACAAAGATTGATCATTCCAACATTATTCAGATCCA
TAGCATCCTTCAGCGCGGTCCCAAGATCTTCATCTTTATGCGTTACGCAG
AGAATGGGGATTTGTTGTCGCACATCAAGAGGTCGGGTCCCATCGATGAG
AAGCAATCGAAGATCTGGTTCTTTCAGATGTCCAAGGCACTGAAGTATCT
GCACAACCTGGACATTGCCCATCGGGATCTCAAGTGCGAGAACATTCTTC
TCTCCAAGCGGCTCAACATCAAGCTGGCCGATTTCGGATTTGCTCGCTAT
TGTCGCGACGATAATGGCCGGGAGATGAAATCTGAGACATACTGCGGATC
AGCTGCTTATGCTGCACCTGAAGTAGTTTGTGGACGACCATATGATCCAA
AGCTAGCGGACGCCTGGTCCTTGGGAGTCATTCTGTTCATCATGATGAAT
GCCAAGATGCCTTTCGATGACAGTAACTTGACCAAATTGCTGGAGGATCA
GCGTAACCGCAAGTTTGCCTTTCGCCGGAAGCTGCAAGAAACGATATCGG
CCCAGGCG

BO14465.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG14305-PA 909 CG14305-RA 1..792 17..808 3910 99.7 Plus
CG14305-PB 909 CG14305-RB 1..792 17..808 3910 99.7 Plus
CG14305-PC 909 CG14305-RC 1..792 17..808 3910 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:10:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG14305-RD 1263 CG14305-RD 130..922 16..808 3935 99.7 Plus
CG14305-RC 1407 CG14305-RC 274..1066 16..808 3935 99.7 Plus
CG14305-RA 1281 CG14305-RA 148..940 16..808 3935 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:10:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18598964..18599756 16..808 3935 99.7 Plus
Blast to na_te.dros performed on 2015-02-11 16:10:32 has no hits.

BO14465.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:28:49 Download gff for BO14465.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14305-PC 1..792 17..808 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:24:57 Download gff for BO14465.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14305-PC 1..792 17..808 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 13:59:47 Download gff for BO14465.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14305-RA 143..940 10..808 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:47:59 Download gff for BO14465.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14305-RA 143..940 10..808 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:47:59 Download gff for BO14465.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 18598959..18599756 10..808 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 13:59:47 Download gff for BO14465.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14424681..14425478 10..808 99   Plus

BO14465.complete Sequence

940 bp assembled on 2006-10-11

GenBank Submission: FJ633139

> BO14465.complete
GAAGTTATCAGTCGACATGTCCAAATACAATTCTAGCGCTGGGATCCGTC
AGTTGGGTACTCGAAGTTCGGATGTGGATGCACTGGCACAGCGGGGCTAC
AATGTTGGTCACAAGATCGGCGAGGGGTCTTATGCCACTGTTATAACCGC
CGGTTATGCCGATGATCATGGACATGGAGTACATTTGGCCTGTAAAATCA
TTGACAAAGCCAAGGCGCCCACTGATTTCGTGAACAAGTTCTTTCCGCGC
GAACTGGAGATCCTGACAAAGATTGATCATTCCAACATTATTCAGATCCA
TAGCATCCTTCAGCGCGGTCCCAAGATCTTCATCTTTATGCGTTACGCAG
AGAATGGGGATTTGTTGTCGCACATCAAGAGGTCGGGTCCCATCGATGAG
AAGCAATCGAAGATCTGGTTCTTTCAGATGTCCAAGGCACTGAAGTATCT
GCACAACCTGGACATTGCCCATCGGGATCTCAAGTGCGAGAACATTCTTC
TCTCCAAGCGGCTCAACATCAAGCTGGCCGATTTCGGATTTGCTCGCTAT
TGTCGCGACGATAATGGCCGGGAGATGAAATCTGAGACATACTGCGGATC
AGCTGCTTATGCTGCACCTGAAGTAGTTTGTGGACGACCATATGATCCAA
AGCTAGCGGACGCCTGGTCCTTGGGAGTCATTCTGTTCATCATGATGAAT
GCCAAGATGCCTTTCGATGACAGTAACTTGACCAAATTGCTGGAGGATCA
GCGTAACCGCAAGTTTGCCTTTCGCCGGAAGCTGCAGGAAACGATATCGG
CCCAGGCGAAGGCCACTGTTTCAGTGCTGCTCGAACCGGAGGCACATGCT
CGCTGGAATCTACGCGAGATCCTTAACTGTGCATGGCTGCGAACCGTCGA
GGAATCCCAAACACCCATTCCCGCAAGCTTTCTAGACCAT

BO14465.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:54:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG14305-RD 909 CG14305-PD 1..906 17..922 4515 99.9 Plus
CG14305-RC 909 CG14305-PC 1..906 17..922 4515 99.9 Plus
CG14305-RA 909 CG14305-PA 1..906 17..922 4515 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:54:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG14305-RD 1263 CG14305-RD 130..1036 16..922 4520 99.9 Plus
CG14305-RC 1407 CG14305-RC 274..1180 16..922 4520 99.9 Plus
CG14305-RA 1281 CG14305-RA 148..1054 16..922 4520 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:54:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18598964..18599870 16..922 4520 99.9 Plus
Blast to na_te.dros performed on 2014-11-27 07:54:52 has no hits.

BO14465.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:36:16 Download gff for BO14465.complete
Subject Subject Range Query Range Percent Splice Strand
CG14305-RC 1..909 17..923 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:51:45 Download gff for BO14465.complete
Subject Subject Range Query Range Percent Splice Strand
CG14305-RC 153..1064 10..922 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:54:13 Download gff for BO14465.complete
Subject Subject Range Query Range Percent Splice Strand
CG14305-RA 149..1054 17..924 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:36:16 Download gff for BO14465.complete
Subject Subject Range Query Range Percent Splice Strand
CG14305-RC 153..1064 10..922 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:07:12 Download gff for BO14465.complete
Subject Subject Range Query Range Percent Splice Strand
CG14305-RA 149..1054 17..924 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:07:12 Download gff for BO14465.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18598965..18599870 17..924 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:54:13 Download gff for BO14465.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14424687..14425592 17..924 99   Plus

BO14465.pep Sequence

Translation from 16 to 940

> BO14465.pep
MSKYNSSAGIRQLGTRSSDVDALAQRGYNVGHKIGEGSYATVITAGYADD
HGHGVHLACKIIDKAKAPTDFVNKFFPRELEILTKIDHSNIIQIHSILQR
GPKIFIFMRYAENGDLLSHIKRSGPIDEKQSKIWFFQMSKALKYLHNLDI
AHRDLKCENILLSKRLNIKLADFGFARYCRDDNGREMKSETYCGSAAYAA
PEVVCGRPYDPKLADAWSLGVILFIMMNAKMPFDDSNLTKLLEDQRNRKF
AFRRKLQETISAQAKATVSVLLEPEAHARWNLREILNCAWLRTVEESQTP
IPASFLDH

BO14465.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:56:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG14305-PD 302 CG14305-PD 1..302 1..302 1582 100 Plus
CG14305-PC 302 CG14305-PC 1..302 1..302 1582 100 Plus
CG14305-PA 302 CG14305-PA 1..302 1..302 1582 100 Plus
CG9222-PA 337 CG9222-PA 71..332 23..290 482 36.4 Plus
Sik3-PA 702 CG15072-PA 27..292 15..291 395 33.8 Plus