Clone Sequence Records
BO14467.3prime Sequence
801 bp (716 high quality bases) assembled on 2006-05-29
> BO14467.3prime
ATGGTCTAGAAAGCTTGCGATGTTCGATTCAGAATCGTCGCCGAGCACAA
TGTGCTTGTAGGCCTTGGTGAGTTGTTCCAGGAATATAAAGGCAAACACC
GTGTGCGGTCCTAAGCGACACAAATAGGGCGTGAAGCCCTTCCATAGGGA
GGCGATACCCTCATTCTTGGAGACCTTCATCAGGACATCCATGGTGCCCT
TGTACTCGGCCGTCTTTTGCTGCTGGATGCGCGTTTTGGCCATGTCCAGT
GGCATTGAGGCAATGGTGGTCAATAGACCGGACATCATGGCGGCAGCGAT
GTGAAGCGAAAGTCCCGAAAAGTATTCCGAAAATGCTGCCTTTAACTGCG
AGTACGAGGCCAGCTGAACCATGTTGACGATCATGGCCCGACCCACAGTG
GGCATGCATCCTTTCCAGAGGGTGATCACGCCCTCGTCCTTGACGATCCG
CACAAAGGCGTTCAAAACACCCGTGTAGTTTCGCCTCTCCGCCGGCGGCA
ATCGGTTATCGGACATCATCCGGATGAGGGCCACCTCCGCCGGATTGCCG
AACATGGCACCGAAAGCACCGGCCAGAATGCCCATACCCATGCTGGCCAA
CACAGTGGGCGGTGCATTGAACTGCTTGCGATAGGCGTCGATCTCCATTT
GGTAGAAACCCATTCGGGCTGTCGTGTACGTGGCCTGTCGCATCAATCCC
GCACTCAATCCATTATACAACGCAAGTATGCCCTCGCTTTTAAAAACCTT
TAGCAGGCAATCGAAGGAGCTCTTGTACTCGCCCGTCGTGGCTGATATCT
G
BO14467.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7514-PA | 906 | CG7514-RA | 121..903 | 801..19 | 3665 | 98.7 | Minus |
CG18418-PA | 936 | CG18418-RA | 388..431 | 546..503 | 170 | 95.4 | Minus |
CG18418-PA | 936 | CG18418-RA | 677..717 | 260..220 | 155 | 95.1 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:13:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7514-RA | 1188 | CG7514-RA | 194..976 | 801..19 | 3765 | 98.7 | Minus |
CG18418-RA | 1142 | CG18418-RA | 265..798 | 750..220 | 595 | 74.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:13:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4687799..4688581 | 19..801 | 3765 | 98.7 | Plus |
3L | 28110227 | 3L | 4689412..4689806 | 356..750 | 550 | 75.9 | Plus |
3L | 28110227 | 3L | 4689273..4689347 | 220..294 | 195 | 84 | Plus |
Blast to na_te.dros performed on 2015-02-10 23:13:12 has no hits.
BO14467.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:28:52 Download gff for
BO14467.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7514-PA | 121..906 | 15..801 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:25:01 Download gff for
BO14467.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7514-PA | 121..906 | 15..801 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:15:57 Download gff for
BO14467.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7514-RA | 194..983 | 10..801 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:26:47 Download gff for
BO14467.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7514-RA | 194..983 | 10..801 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:26:47 Download gff for
BO14467.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4687791..4688581 | 10..801 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:15:57 Download gff for
BO14467.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4687791..4688581 | 10..801 | 98 | | Plus |
BO14467.5prime Sequence
902 bp (767 high quality bases) assembled on 2006-05-29
> BO14467.5prime
GAAGTTATCAGTCGACATGGCGTACAGCATCGAAAAGAAATCCATACCCG
GCTACATGATGTACATCAATGGCGGTCTGGCCGGAATGCTGGGCACCTGC
ATTGTGCAGCCATTGGATTTGGTGAAGACCAGGATGCAGATATCAGCCAC
GACGGGCGAGTACAAGAGCTCCTTCGATTGCCTGCTAAAGGTTTTTAAAA
ACGAGGGCATACTTGCGTTGTATAATGGATTGAGTGCGGGATTGATGCGA
CAGGCCACGTACACGACAGCCCGAATGGGTTTCTACCAAATGGAGATCGA
CGCCTATCGCAAGCAGTTCAATGCACCGCCCACTGTGTTGGCCAGCATGG
GTATGGGCATTCTGGCCGGTGCTTTCGGTGCCATGTTCGGCAATCCGGCG
GAGGTGGCCCTCATCCGGATGATGTCCGATAACCGATTGCCGCCGGCGGA
GAGGCGAAACTACACGGGTGTTTTGAACGCCTTTGTGCGGATCGTCAAGG
ACGAGGGCGTGATCACCCTCTGGAAAGGATGCATGCCCACTGTGGGTCGG
GCCATGATCGTCAACATGGTTCAGCTGGCCTCGTACTCGCAGTTAAAGGC
AGCATTTTCGGAATACTTTTCGGGACTTTCGCTTCACATCGCTGCCGCCA
TGATGTCCGGTCTATTGACCACCATTGCCTCAATGCCACTGGACATGGCC
AAAACGCGCATCCAGCAGCAAAAGACGGCCGAGTACAAGGGCACCATGGA
TGTCCTGATGAAGGTCTCCAAGAATGAGGGTATCGCCTCCCTATGGAANG
GCTTCACGCCCTATTTGTGTCGCTTANGACCGCACACGGTGTTTGCCTTT
ATATTCCTGGAACAACTCACCAAGGCCTACAAGCACATTGTGCTCGGCGA
CG
BO14467.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7514-PA | 906 | CG7514-RA | 1..886 | 17..902 | 4117 | 98.5 | Plus |
CG18418-PA | 936 | CG18418-RA | 388..431 | 392..435 | 170 | 95.4 | Plus |
CG18418-PA | 936 | CG18418-RA | 677..717 | 678..718 | 155 | 95.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:03:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7514-RA | 1188 | CG7514-RA | 73..959 | 16..902 | 4248 | 98.5 | Plus |
CG18418-RA | 1142 | CG18418-RA | 152..798 | 81..718 | 675 | 74.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:03:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4687816..4688702 | 902..16 | 4248 | 98.5 | Minus |
3L | 28110227 | 3L | 4689412..4689919 | 582..81 | 600 | 75 | Minus |
3L | 28110227 | 3L | 4689273..4689347 | 718..644 | 195 | 84 | Minus |
Blast to na_te.dros performed on 2015-02-11 11:03:06 has no hits.
BO14467.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:28:53 Download gff for
BO14467.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7514-PA | 1..886 | 17..902 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:25:03 Download gff for
BO14467.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7514-PA | 1..886 | 17..902 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:13:08 Download gff for
BO14467.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7514-RA | 62..959 | 5..902 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:43:50 Download gff for
BO14467.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7514-RA | 62..959 | 5..902 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:43:50 Download gff for
BO14467.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4687816..4688713 | 5..902 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:13:08 Download gff for
BO14467.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4687816..4688713 | 5..902 | 98 | | Minus |
BO14467.complete Sequence
937 bp assembled on 2006-10-11
GenBank Submission: FJ638727
> BO14467.complete
GAAGTTATCAGTCGACATGGCGTACAGCATCGAAAAGAAATCCATACCCG
GCTACATGATGTACATCAATGGCGGTCTGGCCGGAATGCTGGGCACCTGC
ATTGTGCAGCCATTGGATTTGGTGAAGACCAGGATGCAGATATCAGCCAC
GACGGGCGAGTACAAGAGCTCCTTCGATTGCCTGCTAAAGGTTTTTAAAA
ACGAGGGCATACTTGCGTTGTATAATGGATTGAGTGCGGGATTGATGCGA
CAGGCCACGTACACGACAGCCCGAATGGGTTTCTACCAAATGGAGATCGA
CGCCTATCGCAAGCAGTTCAATGCACCGCCCACTGTGTTGGCCAGCATGG
GTATGGGCATTCTGGCCGGTGCTTTCGGTGCCATGTTCGGCAATCCGGCG
GAGGTGGCCCTCATCCGGATGATGTCCGATAACCGATTGCCGCCGGCGGA
GAGGCGAAACTACACGGGTGTTTTGAACGCCTTTGTGCGGATCGTCAAGG
ACGAGGGCGTGATCACCCTCTGGAAAGGATGCATGCCCACTGTGGGTCGG
GCCATGATCGTCAACATGGTTCAGCTGGCCTCGTACTCGCAGTTAAAGGC
AGCATTTTCGGAATACTTTTCGGGACTTTCGCTTCACATCGCTGCCGCCA
TGATGTCCGGTCTATTGACCACCATTGCCTCAATGCCACTGGACATGGCC
AAAACGCGCATCCAGCAGCAAAAGACGGCCGAGTACAAGGGCACCATGGA
TGTCCTGATGAAGGTCTCCAAGAATGAGGGTATCGCCTCCCTATGGAAGG
GCTTCACGCCCTATTTGTGTCGCTTAGGACCGCACACGGTGTTTGCCTTT
ATATTCCTGGAACAACTCACCAAGGCCTACAAGCACATTGTGCTCGGCGA
CGATTCTGAATCGAACATCGCAAGCTTTCTAGACCAT
BO14467.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:23:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7514-RA | 906 | CG7514-PA | 1..903 | 17..919 | 4350 | 98.8 | Plus |
CG18418-RA | 936 | CG18418-PA | 71..578 | 81..582 | 600 | 75 | Plus |
CG18418-RA | 936 | CG18418-PA | 631..717 | 632..718 | 195 | 81.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:23:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7514-RA | 1188 | CG7514-RA | 73..976 | 16..919 | 4355 | 98.8 | Plus |
CG18418-RA | 1142 | CG18418-RA | 152..659 | 81..582 | 600 | 75 | Plus |
CG18418-RA | 1142 | CG18418-RA | 712..798 | 632..718 | 195 | 81.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:23:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4687799..4688702 | 919..16 | 4355 | 98.8 | Minus |
3L | 28110227 | 3L | 4689412..4689919 | 582..81 | 600 | 75 | Minus |
3L | 28110227 | 3L | 4689273..4689347 | 718..644 | 195 | 84 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:23:04 has no hits.
BO14467.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:36:18 Download gff for
BO14467.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7514-RA | 1..906 | 17..923 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:51:46 Download gff for
BO14467.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7514-RA | 62..983 | 5..928 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:10:06 Download gff for
BO14467.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7514-RA | 74..976 | 17..921 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:36:18 Download gff for
BO14467.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7514-RA | 62..983 | 5..928 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:17:17 Download gff for
BO14467.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7514-RA | 74..976 | 17..921 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:17:17 Download gff for
BO14467.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4687797..4688701 | 17..921 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:10:06 Download gff for
BO14467.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4687797..4688701 | 17..921 | 98 | | Minus |
BO14467.pep Sequence
Translation from 16 to 937
> BO14467.pep
MAYSIEKKSIPGYMMYINGGLAGMLGTCIVQPLDLVKTRMQISATTGEYK
SSFDCLLKVFKNEGILALYNGLSAGLMRQATYTTARMGFYQMEIDAYRKQ
FNAPPTVLASMGMGILAGAFGAMFGNPAEVALIRMMSDNRLPPAERRNYT
GVLNAFVRIVKDEGVITLWKGCMPTVGRAMIVNMVQLASYSQLKAAFSEY
FSGLSLHIAAAMMSGLLTTIASMPLDMAKTRIQQQKTAEYKGTMDVLMKV
SKNEGIASLWKGFTPYLCRLGPHTVFAFIFLEQLTKAYKHIVLGDDSESN
IASFLDH
BO14467.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:56:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7514-PA | 301 | CG7514-PA | 1..301 | 1..301 | 1537 | 100 | Plus |
CG18418-PA | 311 | CG18418-PA | 3..310 | 1..301 | 1046 | 65.9 | Plus |
CG1907-PA | 317 | CG1907-PA | 21..317 | 16..301 | 841 | 56.2 | Plus |
Dic1-PC | 280 | CG8790-PC | 9..272 | 15..284 | 425 | 34.8 | Plus |
Dic1-PA | 280 | CG8790-PA | 9..272 | 15..284 | 425 | 34.8 | Plus |