Clone BO14467 Report

Search the DGRC for BO14467

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:144
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG7514-RA
Protein status:BO14467.pep: validated full length
Sequenced Size:937

Clone Sequence Records

BO14467.3prime Sequence

801 bp (716 high quality bases) assembled on 2006-05-29

> BO14467.3prime
ATGGTCTAGAAAGCTTGCGATGTTCGATTCAGAATCGTCGCCGAGCACAA
TGTGCTTGTAGGCCTTGGTGAGTTGTTCCAGGAATATAAAGGCAAACACC
GTGTGCGGTCCTAAGCGACACAAATAGGGCGTGAAGCCCTTCCATAGGGA
GGCGATACCCTCATTCTTGGAGACCTTCATCAGGACATCCATGGTGCCCT
TGTACTCGGCCGTCTTTTGCTGCTGGATGCGCGTTTTGGCCATGTCCAGT
GGCATTGAGGCAATGGTGGTCAATAGACCGGACATCATGGCGGCAGCGAT
GTGAAGCGAAAGTCCCGAAAAGTATTCCGAAAATGCTGCCTTTAACTGCG
AGTACGAGGCCAGCTGAACCATGTTGACGATCATGGCCCGACCCACAGTG
GGCATGCATCCTTTCCAGAGGGTGATCACGCCCTCGTCCTTGACGATCCG
CACAAAGGCGTTCAAAACACCCGTGTAGTTTCGCCTCTCCGCCGGCGGCA
ATCGGTTATCGGACATCATCCGGATGAGGGCCACCTCCGCCGGATTGCCG
AACATGGCACCGAAAGCACCGGCCAGAATGCCCATACCCATGCTGGCCAA
CACAGTGGGCGGTGCATTGAACTGCTTGCGATAGGCGTCGATCTCCATTT
GGTAGAAACCCATTCGGGCTGTCGTGTACGTGGCCTGTCGCATCAATCCC
GCACTCAATCCATTATACAACGCAAGTATGCCCTCGCTTTTAAAAACCTT
TAGCAGGCAATCGAAGGAGCTCTTGTACTCGCCCGTCGTGGCTGATATCT
G

BO14467.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG7514-PA 906 CG7514-RA 121..903 801..19 3665 98.7 Minus
CG18418-PA 936 CG18418-RA 388..431 546..503 170 95.4 Minus
CG18418-PA 936 CG18418-RA 677..717 260..220 155 95.1 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:13:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG7514-RA 1188 CG7514-RA 194..976 801..19 3765 98.7 Minus
CG18418-RA 1142 CG18418-RA 265..798 750..220 595 74.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:13:09
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4687799..4688581 19..801 3765 98.7 Plus
3L 28110227 3L 4689412..4689806 356..750 550 75.9 Plus
3L 28110227 3L 4689273..4689347 220..294 195 84 Plus
Blast to na_te.dros performed on 2015-02-10 23:13:12 has no hits.

BO14467.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:28:52 Download gff for BO14467.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7514-PA 121..906 15..801 98   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:25:01 Download gff for BO14467.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7514-PA 121..906 15..801 98   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:15:57 Download gff for BO14467.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7514-RA 194..983 10..801 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:26:47 Download gff for BO14467.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7514-RA 194..983 10..801 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:26:47 Download gff for BO14467.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 4687791..4688581 10..801 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:15:57 Download gff for BO14467.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4687791..4688581 10..801 98   Plus

BO14467.5prime Sequence

902 bp (767 high quality bases) assembled on 2006-05-29

> BO14467.5prime
GAAGTTATCAGTCGACATGGCGTACAGCATCGAAAAGAAATCCATACCCG
GCTACATGATGTACATCAATGGCGGTCTGGCCGGAATGCTGGGCACCTGC
ATTGTGCAGCCATTGGATTTGGTGAAGACCAGGATGCAGATATCAGCCAC
GACGGGCGAGTACAAGAGCTCCTTCGATTGCCTGCTAAAGGTTTTTAAAA
ACGAGGGCATACTTGCGTTGTATAATGGATTGAGTGCGGGATTGATGCGA
CAGGCCACGTACACGACAGCCCGAATGGGTTTCTACCAAATGGAGATCGA
CGCCTATCGCAAGCAGTTCAATGCACCGCCCACTGTGTTGGCCAGCATGG
GTATGGGCATTCTGGCCGGTGCTTTCGGTGCCATGTTCGGCAATCCGGCG
GAGGTGGCCCTCATCCGGATGATGTCCGATAACCGATTGCCGCCGGCGGA
GAGGCGAAACTACACGGGTGTTTTGAACGCCTTTGTGCGGATCGTCAAGG
ACGAGGGCGTGATCACCCTCTGGAAAGGATGCATGCCCACTGTGGGTCGG
GCCATGATCGTCAACATGGTTCAGCTGGCCTCGTACTCGCAGTTAAAGGC
AGCATTTTCGGAATACTTTTCGGGACTTTCGCTTCACATCGCTGCCGCCA
TGATGTCCGGTCTATTGACCACCATTGCCTCAATGCCACTGGACATGGCC
AAAACGCGCATCCAGCAGCAAAAGACGGCCGAGTACAAGGGCACCATGGA
TGTCCTGATGAAGGTCTCCAAGAATGAGGGTATCGCCTCCCTATGGAANG
GCTTCACGCCCTATTTGTGTCGCTTANGACCGCACACGGTGTTTGCCTTT
ATATTCCTGGAACAACTCACCAAGGCCTACAAGCACATTGTGCTCGGCGA
CG

BO14467.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG7514-PA 906 CG7514-RA 1..886 17..902 4117 98.5 Plus
CG18418-PA 936 CG18418-RA 388..431 392..435 170 95.4 Plus
CG18418-PA 936 CG18418-RA 677..717 678..718 155 95.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:03:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG7514-RA 1188 CG7514-RA 73..959 16..902 4248 98.5 Plus
CG18418-RA 1142 CG18418-RA 152..798 81..718 675 74.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:03:04
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4687816..4688702 902..16 4248 98.5 Minus
3L 28110227 3L 4689412..4689919 582..81 600 75 Minus
3L 28110227 3L 4689273..4689347 718..644 195 84 Minus
Blast to na_te.dros performed on 2015-02-11 11:03:06 has no hits.

BO14467.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:28:53 Download gff for BO14467.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7514-PA 1..886 17..902 98   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:25:03 Download gff for BO14467.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7514-PA 1..886 17..902 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:13:08 Download gff for BO14467.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7514-RA 62..959 5..902 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:43:50 Download gff for BO14467.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7514-RA 62..959 5..902 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:43:50 Download gff for BO14467.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 4687816..4688713 5..902 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:13:08 Download gff for BO14467.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4687816..4688713 5..902 98   Minus

BO14467.complete Sequence

937 bp assembled on 2006-10-11

GenBank Submission: FJ638727

> BO14467.complete
GAAGTTATCAGTCGACATGGCGTACAGCATCGAAAAGAAATCCATACCCG
GCTACATGATGTACATCAATGGCGGTCTGGCCGGAATGCTGGGCACCTGC
ATTGTGCAGCCATTGGATTTGGTGAAGACCAGGATGCAGATATCAGCCAC
GACGGGCGAGTACAAGAGCTCCTTCGATTGCCTGCTAAAGGTTTTTAAAA
ACGAGGGCATACTTGCGTTGTATAATGGATTGAGTGCGGGATTGATGCGA
CAGGCCACGTACACGACAGCCCGAATGGGTTTCTACCAAATGGAGATCGA
CGCCTATCGCAAGCAGTTCAATGCACCGCCCACTGTGTTGGCCAGCATGG
GTATGGGCATTCTGGCCGGTGCTTTCGGTGCCATGTTCGGCAATCCGGCG
GAGGTGGCCCTCATCCGGATGATGTCCGATAACCGATTGCCGCCGGCGGA
GAGGCGAAACTACACGGGTGTTTTGAACGCCTTTGTGCGGATCGTCAAGG
ACGAGGGCGTGATCACCCTCTGGAAAGGATGCATGCCCACTGTGGGTCGG
GCCATGATCGTCAACATGGTTCAGCTGGCCTCGTACTCGCAGTTAAAGGC
AGCATTTTCGGAATACTTTTCGGGACTTTCGCTTCACATCGCTGCCGCCA
TGATGTCCGGTCTATTGACCACCATTGCCTCAATGCCACTGGACATGGCC
AAAACGCGCATCCAGCAGCAAAAGACGGCCGAGTACAAGGGCACCATGGA
TGTCCTGATGAAGGTCTCCAAGAATGAGGGTATCGCCTCCCTATGGAAGG
GCTTCACGCCCTATTTGTGTCGCTTAGGACCGCACACGGTGTTTGCCTTT
ATATTCCTGGAACAACTCACCAAGGCCTACAAGCACATTGTGCTCGGCGA
CGATTCTGAATCGAACATCGCAAGCTTTCTAGACCAT

BO14467.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:23:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG7514-RA 906 CG7514-PA 1..903 17..919 4350 98.8 Plus
CG18418-RA 936 CG18418-PA 71..578 81..582 600 75 Plus
CG18418-RA 936 CG18418-PA 631..717 632..718 195 81.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:23:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG7514-RA 1188 CG7514-RA 73..976 16..919 4355 98.8 Plus
CG18418-RA 1142 CG18418-RA 152..659 81..582 600 75 Plus
CG18418-RA 1142 CG18418-RA 712..798 632..718 195 81.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:23:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4687799..4688702 919..16 4355 98.8 Minus
3L 28110227 3L 4689412..4689919 582..81 600 75 Minus
3L 28110227 3L 4689273..4689347 718..644 195 84 Minus
Blast to na_te.dros performed on 2014-11-27 08:23:04 has no hits.

BO14467.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:36:18 Download gff for BO14467.complete
Subject Subject Range Query Range Percent Splice Strand
CG7514-RA 1..906 17..923 98   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:51:46 Download gff for BO14467.complete
Subject Subject Range Query Range Percent Splice Strand
CG7514-RA 62..983 5..928 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:10:06 Download gff for BO14467.complete
Subject Subject Range Query Range Percent Splice Strand
CG7514-RA 74..976 17..921 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:36:18 Download gff for BO14467.complete
Subject Subject Range Query Range Percent Splice Strand
CG7514-RA 62..983 5..928 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:17:17 Download gff for BO14467.complete
Subject Subject Range Query Range Percent Splice Strand
CG7514-RA 74..976 17..921 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:17:17 Download gff for BO14467.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4687797..4688701 17..921 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:10:06 Download gff for BO14467.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4687797..4688701 17..921 98   Minus

BO14467.pep Sequence

Translation from 16 to 937

> BO14467.pep
MAYSIEKKSIPGYMMYINGGLAGMLGTCIVQPLDLVKTRMQISATTGEYK
SSFDCLLKVFKNEGILALYNGLSAGLMRQATYTTARMGFYQMEIDAYRKQ
FNAPPTVLASMGMGILAGAFGAMFGNPAEVALIRMMSDNRLPPAERRNYT
GVLNAFVRIVKDEGVITLWKGCMPTVGRAMIVNMVQLASYSQLKAAFSEY
FSGLSLHIAAAMMSGLLTTIASMPLDMAKTRIQQQKTAEYKGTMDVLMKV
SKNEGIASLWKGFTPYLCRLGPHTVFAFIFLEQLTKAYKHIVLGDDSESN
IASFLDH

BO14467.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:56:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG7514-PA 301 CG7514-PA 1..301 1..301 1537 100 Plus
CG18418-PA 311 CG18418-PA 3..310 1..301 1046 65.9 Plus
CG1907-PA 317 CG1907-PA 21..317 16..301 841 56.2 Plus
Dic1-PC 280 CG8790-PC 9..272 15..284 425 34.8 Plus
Dic1-PA 280 CG8790-PA 9..272 15..284 425 34.8 Plus