Clone Sequence Records
BO14471.3prime Sequence
575 bp (574 high quality bases) assembled on 2006-05-29
> BO14471.3prime
ATGGTCTAGAAAGCTTGCAATCCTATTGGGTGCAGGCAGCAGCAGCTCAT
CCAGTAGCTCGGCCACAAATCGTGCATCCACCACAAGATTTGGTTCCCCC
TGGGGGTGTGGTGGCCAGTGGTCCGTCTCATGGTAGTGGACCGGATAGAA
ATAGACATACTCTTCGATATGCTGGCGGGGCTGAGAGGACATGGGACTGT
GGAGCTGCACATGCCGTCGTCCAGGTGGACGATGCATTTGCAGCTGTTGA
CCCACGACAAGTAGATCCAAGGTGTTATTATTGGATGCTTTGAATTTAAC
CGATTTATTCGGATGATTGCGTCTGATCTGCGTTGTCTGCTTCCTGGCCA
TTGGCAACGGCATCGGCGTCTGCTGACCACCACCGCTCATCCGTTGGCCA
GGATGGGCGACGAACGGTGGCTGCAGGAGCGGATCGTGGATGAGCAAGTC
GCTGGACCTCTTGCCCGTCAGCCGCTTGAGGCGTCTACCAATCCTGTCCC
ACTCGTTAAGTTGCCGCTGATGCGCCTGCTGCAAGCGCCAAAGTGTTGTT
GCAACGTCCATGTCGACTGATAACT
BO14471.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15330-PA | 546 | CG15330-RA | 1..456 | 561..106 | 2280 | 100 | Minus |
CG15330-PA | 546 | CG15330-RA | 465..531 | 97..31 | 335 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:44:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15330-RA | 639 | CG15330-RA | 59..589 | 561..31 | 2595 | 99.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:44:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 7956122..7956652 | 561..31 | 2595 | 99.2 | Minus |
Blast to na_te.dros performed on 2015-02-10 22:44:56 has no hits.
BO14471.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:28:58 Download gff for
BO14471.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15330-PA | 1..543 | 19..561 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:25:10 Download gff for
BO14471.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15330-PA | 1..543 | 19..561 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 07:49:10 Download gff for
BO14471.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15330-RA | 51..601 | 19..570 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:09:27 Download gff for
BO14471.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15330-RA | 51..601 | 19..570 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:09:27 Download gff for
BO14471.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 7956114..7956664 | 19..570 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 07:49:10 Download gff for
BO14471.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 7850147..7850697 | 19..570 | 97 | | Minus |
BO14471.5prime Sequence
575 bp (574 high quality bases) assembled on 2006-05-29
> BO14471.5prime
GAAGTTATCACTCGACATGGACGTTGCAACAACACTTTGGCGCTTGCAGC
AGGCGCATCAGCGGCAACTTAACGAGTGGGACAGGATTGGTAGACGCCTC
AAGCGGCTGACGGGCAAGAGGTCCAGCGACTTGCTCATCCACGATCCGCT
CCTGCAGCCACCGTTCGTCGCCCATCCTGGCCAACGGATGAGCGGTGGTG
GTCAGCAGACGCCGATGCCGTTGCCAATGGCCAGGAAGCAGACAACGCAG
ATCAGACGCAATCATCCGAATAAATCGGTTAAATTCAAAGCATCCAATAA
TAACACCTTGGATCTACTTGTCGTGGGTCAACAGCTGCAAATGCATCGTC
CACCTGGACGACGGCATGTGCAGCTCCACAGTCCCATGTCCTCTCAGCCC
CGCCAGCATATCGAAGAGTATGTCTATTTCTATCCGGTCCACTACCATGA
GACGGACCACTGGCCACCACACGGCCAGCCGGAACCAAATCTTGTGGTGG
ATGCACGATTTGTGGCCGAGCTACTGGATGAGCTGCTGCTGCCTGCAGGC
AATCGTATTGCAAGCTTTCTAGACC
BO14471.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15330-PA | 546 | CG15330-RA | 1..543 | 17..559 | 2715 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:47:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15330-RA | 639 | CG15330-RA | 59..601 | 17..559 | 2715 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:47:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 7956122..7956664 | 17..559 | 2715 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 12:47:20 has no hits.
BO14471.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:28:59 Download gff for
BO14471.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15330-PA | 1..546 | 17..562 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:25:11 Download gff for
BO14471.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15330-PA | 1..546 | 17..562 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:11:59 Download gff for
BO14471.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15330-RA | 51..601 | 8..559 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:26:27 Download gff for
BO14471.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15330-RA | 51..601 | 8..559 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:26:27 Download gff for
BO14471.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 7956114..7956664 | 8..559 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:11:59 Download gff for
BO14471.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 7850147..7850697 | 8..559 | 99 | | Plus |
BO14471.complete Sequence
577 bp assembled on 2006-10-11
GenBank Submission: FJ633141
> BO14471.complete
GAAGTTATCAGTCGACATGGACGTTGCAACAACACTTTGGCGCTTGCAGC
AGGCGCATCAGCGGCAACTTAACGAGTGGGACAGGATTGGTAGACGCCTC
AAGCGGCTGACGGGCAAGAGGTCCAGCGACTTGCTCATCCACGATCCGCT
CCTGCAGCCACCGTTCGTCGCCCATCCTGGCCAACGGATGAGCGGTGGTG
GTCAGCAGACGCCGATGCCGTTGCCAATGGCCAGGAAGCAGACAACGCAG
ATCAGACGCAATCATCCGAATAAATCGGTTAAATTCAAAGCATCCAATAA
TAACACCTTGGATCTACTTGTCGTGGGTCAACAGCTGCAAATGCATCGTC
CACCTGGACGACGGCATGTGCAGCTCCACAGTCCCATGTCCTCTCAGCCC
CGCCAGCATATCGAAGAGTATGTCTATTTCTATCCGGTCCACTACCATGA
GACGGACCACTGGCCACCACACGGCCAGCCGGAACCAAATCTTGTGGTGG
ATGCACGATTTGTGGCCGAGCTACTGGATGAGCTGCTGCTGCCTGCAGGC
AATCGTATTGCAAGCTTTCTAGACCAT
BO14471.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:42:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15330-RA | 546 | CG15330-PA | 1..543 | 17..559 | 2715 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:42:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15330-RA | 639 | CG15330-RA | 59..601 | 17..559 | 2715 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:42:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 7956122..7956664 | 17..559 | 2715 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:42:33 has no hits.
BO14471.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:36:20 Download gff for
BO14471.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15330-RA | 1..546 | 17..562 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:51:49 Download gff for
BO14471.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15330-RA | 51..601 | 8..559 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:36:09 Download gff for
BO14471.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15330-RA | 59..601 | 17..561 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:36:20 Download gff for
BO14471.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15330-RA | 51..601 | 8..559 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:28:46 Download gff for
BO14471.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15330-RA | 59..601 | 17..561 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:28:46 Download gff for
BO14471.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 7956122..7956664 | 17..561 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:36:09 Download gff for
BO14471.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 7850155..7850697 | 17..561 | 99 | | Plus |
BO14471.pep Sequence
Translation from 16 to 577
> BO14471.pep
MDVATTLWRLQQAHQRQLNEWDRIGRRLKRLTGKRSSDLLIHDPLLQPPF
VAHPGQRMSGGGQQTPMPLPMARKQTTQIRRNHPNKSVKFKASNNNTLDL
LVVGQQLQMHRPPGRRHVQLHSPMSSQPRQHIEEYVYFYPVHYHETDHWP
PHGQPEPNLVVDARFVAELLDELLLPAGNRIASFLDH
BO14471.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:56:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15330-PA | 181 | CG15330-PA | 1..181 | 1..181 | 980 | 100 | Plus |