Clone Sequence Records
BO14475.5prime Sequence
572 bp (571 high quality bases) assembled on 2006-05-29
> BO14475.5prime
GAAGTTATCAGTCGACATGGCCAAAAAGGAGGAGCCTCTTATGGACGGAC
CCAAGCGGATGAACCGCGAATTGGCCCTGATGTTGGAGGATAAACAGAAT
TTGCAGTTCCGAAACCTCTTGGTGGAGCCGAACAACATCTACAAGTGGAC
AGGCCTGCTGATGCCGGTGGCACCGCCTTATGACAAGGGTGCCTACAAAA
TGGAGATCGACTTTCCACTGGATTACCCATTCAAGCCGCCTCGCATCCAT
ATAAACACGAGGATGTACCACCTGAATGTCAATGAGCGTGGTCAGGTGTG
TGTGCCTATTTTGGAGGTCGAGCACTGGATCCCAACCACGCGGATTGACC
AGGTGCTGCAGGTACTGCTGGCCACCATAAATGATCCACAGCCGGAGAAC
GCCTGGCACATCGAAATGGCCGGCGAGTATCGCAATGATCCGGTGCGATT
CTTCAAAATGGCCGATGCCTGGGTGCAGAAGTACAGTGAACCCCGGCCCA
CTGAAGAGGAGCTAGCAAAGTTTGCGCGCAAGCGAAAGAAAGCGATGACG
AAGAAGGCAAGCTTTCTAGACC
BO14475.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17030-PA | 543 | CG17030-RA | 1..540 | 17..556 | 2650 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:57:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17030-RA | 767 | CG17030-RA | 132..672 | 16..556 | 2675 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:57:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4980098..4980638 | 556..16 | 2675 | 99.6 | Minus |
Blast to na_te.dros performed on 2015-02-12 00:57:11 has no hits.
BO14475.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:29:07 Download gff for
BO14475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17030-PA | 1..543 | 17..557 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:25:23 Download gff for
BO14475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17030-PA | 1..543 | 17..557 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:34:41 Download gff for
BO14475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17030-RA | 132..672 | 16..556 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:36:13 Download gff for
BO14475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17030-RA | 132..672 | 16..556 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 04:36:13 Download gff for
BO14475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4980098..4980638 | 16..556 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:34:41 Download gff for
BO14475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4980098..4980638 | 16..556 | 99 | | Minus |
BO14475.3prime Sequence
572 bp (571 high quality bases) assembled on 2006-05-29
> BO14475.3prime
ATGGTCTAGAAAGCTTGCCTTCTTCGTCATCGCTTTCTTTCGCTTGCGCG
CAAACTTTGCTAGCTCCTCTTCAGTGGGCCGGGGTTCACTGTACTTCTGC
ACCCAGGCATCGGCCATTTTGAAGAATCGCACCGGATCATTGCGATACTC
GCCGGCCATTTCGATGTGCCAGGCGTTCTCCGGCTGTGGATCATTTATGG
TGGCCAGCAGTACCTGCAGCACCTGGTCAATCCGCGTGGTTGGGATCCAG
TGCTCGACCTCCAAAATAGGCACACACACCTGACCACGCTCATTGACATT
CAGGTGGTACATCCTCGTGTTTATATGGATGCGAGGCGGCTTGAATGGGT
AATCCAGTGGAAAGTCGATCTCCATTTTGTAGGCACCCTTGTCATAAGGC
GGTGCCACCGGCATCAGCAGGCCTGTCCACTTGTAGATGTTGTTCGGCTC
CACCAAGAGGTTTCGGAACTGCAAATTCTGTTTATCCTCCAACATCAGGG
CCAATTCGCGGTTCATCCGCTTGGGTCCGTCCATAAGAGGCTCCTCCTTT
TTGGCCATGTCGACTGATAACT
BO14475.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17030-PA | 543 | CG17030-RA | 1..540 | 558..19 | 2650 | 99.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 11:02:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17030-RA | 767 | CG17030-RA | 132..672 | 559..19 | 2675 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 11:02:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4980098..4980638 | 19..559 | 2675 | 99.6 | Plus |
Blast to na_te.dros performed on 2015-01-31 11:02:43 has no hits.
BO14475.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:29:06 Download gff for
BO14475.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17030-PA | 1..543 | 18..558 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:25:22 Download gff for
BO14475.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17030-PA | 1..543 | 18..558 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:45:47 Download gff for
BO14475.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17030-RA | 132..672 | 19..559 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:53:07 Download gff for
BO14475.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17030-RA | 132..672 | 19..559 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:53:07 Download gff for
BO14475.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4980098..4980638 | 19..559 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:45:47 Download gff for
BO14475.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4980098..4980638 | 19..559 | 99 | | Plus |
BO14475.complete Sequence
574 bp assembled on 2006-10-11
GenBank Submission: FJ633143
> BO14475.complete
GAAGTTATCAGTCGACATGGCCAAAAAGGAGGAGCCTCTTATGGACGGAC
CCAAGCGGATGAACCGCGAATTGGCCCTGATGTTGGAGGATAAACAGAAT
TTGCAGTTCCGAAACCTCTTGGTGGAGCCGAACAACATCTACAAGTGGAC
AGGCCTGCTGATGCCGGTGGCACCGCCTTATGACAAGGGTGCCTACAAAA
TGGAGATCGACTTTCCACTGGATTACCCATTCAAGCCGCCTCGCATCCAT
ATAAACACGAGGATGTACCACCTGAATGTCAATGAGCGTGGTCAGGTGTG
TGTGCCTATTTTGGAGGTCGAGCACTGGATCCCAACCACGCGGATTGACC
AGGTGCTGCAGGTACTGCTGGCCACCATAAATGATCCACAGCCGGAGAAC
GCCTGGCACATCGAAATGGCCGGCGAGTATCGCAATGATCCGGTGCGATT
CTTCAAAATGGCCGATGCCTGGGTGCAGAAGTACAGTGAACCCCGGCCCA
CTGAAGAGGAGCTAGCAAAGTTTGCGCGCAAGCGAAAGAAAGCGATGACG
AAGAAGGCAAGCTTTCTAGACCAT
BO14475.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:40:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17030-RA | 543 | CG17030-PA | 1..540 | 17..556 | 2670 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:40:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17030-RA | 767 | CG17030-RA | 132..672 | 16..556 | 2675 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:40:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4980098..4980638 | 556..16 | 2675 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:40:21 has no hits.
BO14475.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:36:25 Download gff for
BO14475.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17030-RA | 1..543 | 17..557 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:51:52 Download gff for
BO14475.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17030-RA | 132..672 | 16..556 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:54:05 Download gff for
BO14475.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17030-RA | 133..672 | 17..558 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:36:25 Download gff for
BO14475.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17030-RA | 132..672 | 16..556 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:23:56 Download gff for
BO14475.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17030-RA | 133..672 | 17..558 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:23:56 Download gff for
BO14475.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4980096..4980637 | 17..558 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:54:05 Download gff for
BO14475.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4980096..4980637 | 17..558 | 99 | | Minus |
BO14475.pep Sequence
Translation from 16 to 574
> BO14475.pep
MAKKEEPLMDGPKRMNRELALMLEDKQNLQFRNLLVEPNNIYKWTGLLMP
VAPPYDKGAYKMEIDFPLDYPFKPPRIHINTRMYHLNVNERGQVCVPILE
VEHWIPTTRIDQVLQVLLATINDPQPENAWHIEMAGEYRNDPVRFFKMAD
AWVQKYSEPRPTEEELAKFARKRKKAMTKKASFLDH
BO14475.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:56:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17030-PA | 180 | CG17030-PA | 1..180 | 1..180 | 971 | 100 | Plus |
| Ubc10-PA | 154 | CG5788-PA | 1..154 | 9..163 | 411 | 45.8 | Plus |
| Ubc84D-PA | 153 | CG12799-PA | 1..152 | 9..161 | 358 | 41.8 | Plus |
| eff-PC | 147 | CG7425-PC | 28..146 | 39..157 | 230 | 35 | Plus |
| eff-PB | 147 | CG7425-PB | 28..146 | 39..157 | 230 | 35 | Plus |
