Clone BO14482 Report

Search the DGRC for BO14482

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:144
Well:82
Vector:pDNR-Dual
Associated Gene/TranscriptCG15296-RA
Protein status:BO14482.pep: validated full length
Sequenced Size:541

Clone Sequence Records

BO14482.3prime Sequence

539 bp (538 high quality bases) assembled on 2006-05-29

> BO14482.3prime
ATGGTCTAGAAAGCTTGCAACCCTCTGTTCAAGAGCTCCATTTCCCTCTT
CCCCCGCAAAATTATCTACGGTCTTTGGTTTCTCAAATGGGACTAAATCC
TCGAAAGATCCATCGCCAGCTGCAGAATCTGGTGAATCAATAATCAGTTG
CTCCTTATTTGTGGAAGTATTCCACCATTTTGAATATTCTTTGTGACGCA
ATTCCTTGGCCTTTTCCACCAAATCCAGACAGGTGACCTTGGCACCGTCG
GCCAATTCCTCCGAATAGTTGGGTATGTTTCGAATGATACGAAAAGTGCC
CTTCACTCCTTCATTGTAGTATTTCCGGGATAGCTCACCCACGCTCAGAT
CGCTCTCATCTAACTTCAGCGTTCGTCGCAGAAGTCCAAATACTGGTTGA
AGACCATTGGTGATCTGATCGAGCAGGTGGTCCGTCTCCTCTGTCTTACC
CCAAACTCCAACTCGATTGGTTATGTAGACGGTCATCGAGACCGCTGCAG
TTCGATACATCAGTGTAGTAAACATGTCGACTGATAACT

BO14482.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG15296-PA 510 CG15296-RA 1..507 525..19 2535 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:39:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG15296-RB 686 CG15296-RB 40..546 525..19 2535 100 Minus
CG15296-RA 690 CG15296-RA 44..550 525..19 2535 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:38:57
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10565982..10566488 19..525 2535 100 Plus
Blast to na_te.dros performed on 2015-02-10 22:39:01 has no hits.

BO14482.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:29:18 Download gff for BO14482.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15296-PA 1..510 15..525 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:25:40 Download gff for BO14482.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15296-PA 1..510 15..525 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 07:48:26 Download gff for BO14482.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15296-RA 35..553 15..534 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:06:40 Download gff for BO14482.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15296-RA 35..553 15..534 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:06:40 Download gff for BO14482.3prime
Subject Subject Range Query Range Percent Splice Strand
X 10565978..10566497 15..534 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 07:48:26 Download gff for BO14482.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 10460011..10460530 15..534 98   Plus

BO14482.5prime Sequence

539 bp (538 high quality bases) assembled on 2006-05-29

> BO14482.5prime
GAAGTTATCAGTCGACATGTTTACTACACTGATGTATCGAACTGCAGCGG
TCTCGATGACCGTCTACATAACCAATCGAGTTGGAGTTTGGGGTAAGACA
GAGGAGACGGACCACCTGCTCGATCAGATCACCAATGGTCTTCAACCAGT
ATTTGGACTTCTGCGACGAACGCTGAAGTTAGATGAGAGCGATCTGAGCG
TGGGTGAGCTATCCCGGAAATACTACAATGAAGGAGTGAAGGGCACTTTT
CGTATCATTCGAAACATACCCAACTATTCGGAGGAATTGGCCGACGGTGC
CAAGGTCACCTGTCTGGATTTGGTGGAAAAGGCCAAGGAATTGCGTCACA
AAGAATATTCAAAATGGTGGAATACTTCCACAAATAAGGAGCAACTGATT
ATTGATTCACCAGATTCTGCAGCTGGCGATGGATCTTTCGAGGATTTAGT
CCCATTTGAGAAACCAAAGACCGTAGATAATTTTGCGGGGGAAGAGGGAA
ATGGAGCTCTTGAACAGAGGGTTGCAAGCTTTCTAGACC

BO14482.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:22:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG15296-PA 510 CG15296-RA 1..507 17..523 2535 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 02:11:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG15296-RB 686 CG15296-RB 40..546 17..523 2535 100 Plus
CG15296-RA 690 CG15296-RA 44..550 17..523 2535 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 02:10:56
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10565982..10566488 523..17 2535 100 Minus
Blast to na_te.dros performed on 2015-02-04 02:11:00 has no hits.

BO14482.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:29:19 Download gff for BO14482.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15296-PA 1..510 17..527 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:25:42 Download gff for BO14482.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15296-PA 1..510 17..527 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 20:43:22 Download gff for BO14482.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15296-RA 35..553 8..527 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:20:35 Download gff for BO14482.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15296-RA 35..553 8..527 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:20:35 Download gff for BO14482.5prime
Subject Subject Range Query Range Percent Splice Strand
X 10565978..10566497 8..527 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 20:43:22 Download gff for BO14482.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 10460011..10460530 8..527 98   Minus

BO14482.complete Sequence

541 bp assembled on 2006-10-11

GenBank Submission: FJ633146

> BO14482.complete
GAAGTTATCAGTCGACATGTTTACTACACTGATGTATCGAACTGCAGCGG
TCTCGATGACCGTCTACATAACCAATCGAGTTGGAGTTTGGGGTAAGACA
GAGGAGACGGACCACCTGCTCGATCAGATCACCAATGGTCTTCAACCAGT
ATTTGGACTTCTGCGACGAACGCTGAAGTTAGATGAGAGCGATCTGAGCG
TGGGTGAGCTATCCCGGAAATACTACAATGAAGGAGTGAAGGGCACTTTT
CGTATCATTCGAAACATACCCAACTATTCGGAGGAATTGGCCGACGGTGC
CAAGGTCACCTGTCTGGATTTGGTGGAAAAGGCCAAGGAATTGCGTCACA
AAGAATATTCAAAATGGTGGAATACTTCCACAAATAAGGAGCAACTGATT
ATTGATTCACCAGATTCTGCAGCTGGCGATGGATCTTTCGAGGATTTAGT
CCCATTTGAGAAACCAAAGACCGTAGATAATTTTGCGGGGGAAGAGGGAA
ATGGAGCTCTTGAACAGAGGGTTGCAAGCTTTCTAGACCAT

BO14482.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:13:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG15296-RB 510 CG15296-PB 1..507 17..523 2535 100 Plus
CG15296-RA 510 CG15296-PA 1..507 17..523 2535 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:13:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG15296-RB 686 CG15296-RB 40..546 17..523 2535 100 Plus
CG15296-RA 690 CG15296-RA 44..550 17..523 2535 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:13:54
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10565982..10566488 523..17 2535 100 Minus
Blast to na_te.dros performed on 2014-11-27 10:13:55 has no hits.

BO14482.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:51:58 Download gff for BO14482.complete
Subject Subject Range Query Range Percent Splice Strand
CG15296-RA 1..510 17..527 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:23:58 Download gff for BO14482.complete
Subject Subject Range Query Range Percent Splice Strand
CG15296-RA 3..521 8..527 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:06:10 Download gff for BO14482.complete
Subject Subject Range Query Range Percent Splice Strand
CG15296-RA 50..550 23..525 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:51:58 Download gff for BO14482.complete
Subject Subject Range Query Range Percent Splice Strand
CG15296-RA 3..521 8..527 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:16:22 Download gff for BO14482.complete
Subject Subject Range Query Range Percent Splice Strand
CG15296-RA 50..550 23..525 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:16:22 Download gff for BO14482.complete
Subject Subject Range Query Range Percent Splice Strand
X 10565980..10566482 23..525 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:06:10 Download gff for BO14482.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 10460013..10460515 23..525 99   Minus

BO14482.pep Sequence

Translation from 16 to 541

> BO14482.pep
MFTTLMYRTAAVSMTVYITNRVGVWGKTEETDHLLDQITNGLQPVFGLLR
RTLKLDESDLSVGELSRKYYNEGVKGTFRIIRNIPNYSEELADGAKVTCL
DLVEKAKELRHKEYSKWWNTSTNKEQLIIDSPDSAAGDGSFEDLVPFEKP
KTVDNFAGEEGNGALEQRVASFLDH

BO14482.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:23:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG15296-PB 169 CG15296-PB 1..169 1..169 879 100 Plus
CG15296-PA 169 CG15296-PA 1..169 1..169 879 100 Plus
CG7603-PA 122 CG7603-PA 1..108 1..104 159 36.1 Plus