Clone BO14485 Report

Search the DGRC for BO14485

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:144
Well:85
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO14485.pep: validated full length
Sequenced Size:868

Clone Sequence Records

BO14485.3prime Sequence

869 bp (723 high quality bases) assembled on 2006-05-29

> BO14485.3prime
ATGGTCTAGAAAGCTTGCACGTGCGGTCTGCGAAAATGGATTGGGTCTGG
CGCGGAACGTGGTTCGTTGGCGCAGCTTTTGGTAGGCCTCCCGTTCCGCC
CGTTGGCGCTGATCCTCCAGCTCGCGGCGCCGCGCCTCCTGCGCCTTGGA
CGTCTGGATGTTGAAAATGCGCCGCTGCTGGACGCGCGATTCGGCGGACA
AGTTGAAGGGCTCGACCTTCACCCTTGCCGCTGGAACTGCGGAGGAAGGT
CGGTTCGAGGACTTCAAGGGCTGACGGCTGCTCTGCGGAATCGGTTTGGC
CCTAGGAGCCTGCATTTTGTGAAGTTGGGACTCCAGCTCGCGCTCCCTCT
GCAGCTGCTCCACCCGCAAGCGGCGCTTTTCCTCCATTTCACGCGAATTC
TTGAGCACATTGGGGGTCGTGGGGCAGGTGATCCGATGCACAACGACCCT
GGAGGACTGACGTGAGTGCGCCTGACGAAAGTCGGGCATCGGTCGGCTGT
GGAACTCGCGCTGCTTGCGCTCCTGCTCCCTGCATTCGCGGATCAGCTGA
TCCTTGCGACTGGAATAGATGTCCTTGAAGCGATAGGCCTTTGGAGCCGA
CACCTGCGGTGGAAATGTGGGCTTCTCGCACGAGATCTTCATATTCTTGA
ACAGATTGGAGACCAAAACCTGAGAATGCTGCTGGGCCTGGCTGACAATC
TGCCTGCCGCGTCGCTGCAGCTGCTCCACCTGCTCACGATGCTGTTGGAA
TCTGGGAAACTCCTCACTTATTGCGGATGCAAAGCTCTCCCATCGACTCC
ACACCCAAATCGCCCCAGTTGTACTCCGCTTTTCGATTCAGACATTATTA
TCATGTCCACTGATAACTT

BO14485.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG15395-PA 837 CG15395-RA 63..834 790..19 3835 99.8 Minus
CG15395-PA 837 CG15395-RA 22..64 832..790 215 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:52:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG15395-RB 1234 CG15395-RB 165..998 854..19 4100 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:52:33
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2610476..2611047 590..19 2860 100 Minus
2L 23513712 2L 2610158..2610422 854..588 1205 98.5 Minus
Blast to na_te.dros performed on 2015-02-12 03:52:34 has no hits.

BO14485.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:29:25 Download gff for BO14485.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15395-PA 1..837 16..854 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:25:49 Download gff for BO14485.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15395-PA 1..837 16..854 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:44:24 Download gff for BO14485.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 159..1004 12..863 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:44:48 Download gff for BO14485.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 159..1004 12..863 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:44:48 Download gff for BO14485.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 2610152..2610421 589..863 97 -> Minus
2L 2610478..2611053 12..588 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:44:24 Download gff for BO14485.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2610152..2610421 589..863 97 -> Minus
arm_2L 2610478..2611053 12..588 99   Minus

BO14485.5prime Sequence

866 bp (729 high quality bases) assembled on 2006-05-29

> BO14485.5prime
GAAGTTATCAGTCGACATGATAATAATGTCTGATTCGAAAGCGGAGTACA
ACTGGGGCGATTTGGGTGTGGAGTCGATGGAGAGCTTTGCATCCGCAATA
AGTGAGGAGTTTCCCAGACTCCAACAGCATCGTGAGCAGGTGGAGCAGCT
GCAGCGACGCGGCAGGCAGATTGTCAGCCAGGCCCAGCAGCATTCTCAGG
TTTTGGTCTCCAATCTGTTCAAGAATATGAAGATCTCGTGCGAGAAGCCC
ACATTTCCACCGCAGGTGTCGGCTCCAAAGGCCTATCGCTTCAAGGACAT
CTATTCCAGTCGCAAGGATCAGCTGATCCGCGAATGCAGGGAGCAGGAGC
GCAAGCAGCGCGAGTTCCACAGCCGACCGATGCCCGACTTTCGTCAGGCG
CACTCACGTCAGTCCTCCAGGGTCGTTGTGCATCGGATCACCTGCCCCAC
GACCCCCAATGTGCTCAAGAATTCGCGTGAAATGGAGGAAAAGCGCCGCT
TGCGGGTGGAGCAGCTGCAGAGGGAGCGCGAGCTGGAGTCCCAACTTCAC
AAAATGCAGGCTCCTAGGGCCAAACCGATTCCGCAGAGCAGCCGTCAGCC
CTTGAAGTCCTCGAACCGACCTTCCTCCGCAGTTCCAGCGGCAAGGGTGA
AGGTCGAGCCCTTCAACTTGTCCGCCGAATCGCGCGTCCAGCAGCGGCGC
ATTTTCAACATCCAGACGTCCAAGGCGCAGGAGGCGCGGCGCCGCGAGCT
GGAGGATCAGCGCCAACGGGCGGAACGGGAGGCCTACCAAAAGCTGCGCC
AACGAACCACGTTCCGCGCCAGACCCAATCCATTTTCGCAGACCGCACGT
GCAAGCTTTCTAGACC

BO14485.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG15395-PA 837 CG15395-RA 1..834 17..850 4170 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:06:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG15395-RB 1234 CG15395-RB 165..998 17..850 4170 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 11:06:07
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2610476..2611047 279..850 2860 100 Plus
2L 23513712 2L 2610158..2610422 17..281 1325 100 Plus
Blast to na_te.dros performed on 2015-02-09 11:06:10 has no hits.

BO14485.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:29:26 Download gff for BO14485.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15395-PA 1..837 17..853 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:25:50 Download gff for BO14485.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15395-PA 1..837 17..853 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 16:41:15 Download gff for BO14485.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 154..1004 7..857 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:42:18 Download gff for BO14485.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 154..1004 7..857 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 11:42:18 Download gff for BO14485.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 2610147..2610421 7..280 98 -> Plus
2L 2610478..2611053 281..857 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 16:41:15 Download gff for BO14485.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2610147..2610421 7..280 98 -> Plus
arm_2L 2610478..2611053 281..857 99   Plus

BO14485.complete Sequence

868 bp assembled on 2006-10-11

GenBank Submission: FJ633149

> BO14485.complete
GAAGTTATCAGTCGACATGATAATAATGTCTGATTCGAAAGCGGAGTACA
ACTGGGGCGATTTGGGTGTGGAGTCGATGGAGAGCTTTGCATCCGCAATA
AGTGAGGAGTTTCCCAGACTCCAACAGCATCGTGAGCAGGTGGAGCAGCT
GCAGCGACGCGGCAGGCAGATTGTCAGCCAGGCCCAGCAGCATTCTCAGG
TTTTGGTCTCCAATCTGTTCAAGAATATGAAGATCTCGTGCGAGAAGCCC
ACATTTCCACCGCAGGTGTCGGCTCCAAAGGCCTATCGCTTCAAGGACAT
CTATTCCAGTCGCAAGGATCAGCTGATCCGCGAATGCAGGGAGCAGGAGC
GCAAGCAGCGCGAGTTCCACAGCCGACCGATGCCCGACTTTCGTCAGGCG
CACTCACGTCAGTCCTCCAGGGTCGTTGTGCATCGGATCACCTGCCCCAC
GACCCCCAATGTGCTCAAGAATTCGCGTGAAATGGAGGAAAAGCGCCGCT
TGCGGGTGGAGCAGCTGCAGAGGGAGCGCGAGCTGGAGTCCCAACTTCAC
AAAATGCAGGCTCCTAGGGCCAAACCGATTCCGCAGAGCAGCCGTCAGCC
CTTGAAGTCCTCGAACCGACCTTCCTCCGCAGTTCCAGCGGCAAGGGTGA
AGGTCGAGCCCTTCAACTTGTCCGCCGAATCGCGCGTCCAGCAGCGGCGC
ATTTTCAACATCCAGACGTCCAAGGCGCAGGAGGCGCGGCGCCGCGAGCT
GGAGGATCAGCGCCAACGGGCGGAACGGGAGGCCTACCAAAAGCTGCGCC
AACGAACCACGTTCCGCGCCAGACCCAATCCATTTTCGCAGACCGCACGT
GCAAGCTTTCTAGACCAT

BO14485.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:00:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG15395-RB 828 CG15395-PB 1..825 26..850 4125 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:00:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG15395-RB 1234 CG15395-RB 165..998 17..850 4170 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:00:42
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2610476..2611047 279..850 2860 100 Plus
2L 23513712 2L 2610158..2610422 17..281 1325 100 Plus
Blast to na_te.dros performed on 2014-11-27 14:00:43 has no hits.

BO14485.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:35:58 Download gff for BO14485.complete
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 1..828 26..853 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:51:32 Download gff for BO14485.complete
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 1..852 7..857 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:31:15 Download gff for BO14485.complete
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 165..998 17..852 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:35:58 Download gff for BO14485.complete
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 1..852 7..857 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:01:21 Download gff for BO14485.complete
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 165..998 17..852 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:01:21 Download gff for BO14485.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2610158..2610421 17..280 100 -> Plus
2L 2610478..2611047 281..852 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:31:15 Download gff for BO14485.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2610158..2610421 17..280 100 -> Plus
arm_2L 2610478..2611047 281..852 99   Plus

BO14485.pep Sequence

Translation from 16 to 868

> BO14485.pep
MIIMSDSKAEYNWGDLGVESMESFASAISEEFPRLQQHREQVEQLQRRGR
QIVSQAQQHSQVLVSNLFKNMKISCEKPTFPPQVSAPKAYRFKDIYSSRK
DQLIRECREQERKQREFHSRPMPDFRQAHSRQSSRVVVHRITCPTTPNVL
KNSREMEEKRRLRVEQLQRERELESQLHKMQAPRAKPIPQSSRQPLKSSN
RPSSAVPAARVKVEPFNLSAESRVQQRRIFNIQTSKAQEARRRELEDQRQ
RAEREAYQKLRQRTTFRARPNPFSQTARASFLDH

BO14485.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:57:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG15395-PB 275 CG15395-PB 1..275 4..278 1397 100 Plus
mei-38-PA 325 CG14781-PA 193..319 85..246 240 33.3 Plus
mei-38-PB 326 CG14781-PB 194..320 85..246 240 33.3 Plus
CG5781-PA 266 CG5781-PA 74..255 87..276 175 26.9 Plus