Clone Sequence Records
BO14495.3prime Sequence
776 bp (687 high quality bases) assembled on 2006-05-29
> BO14495.3prime
ATGGTCTAGAAAGCTTGCTAGTTGCATGCGTGGTTTCTTTGTGACCGAGG
GAGATCCTCCTGCTGCGTCAGCCATCGAGCTATAGGATCTATTGATGTAC
ATCCTAGGAGTAGAATGACTTCTTATTGCGCTACCACGAGCATCCTTGCG
AACTCTATCGGGTAAAATCGTTGGCAAGGTAAAATTGTCGAAAAGATTCG
CCTTGGTGCCAATGGGAGGAGCAAGGGAGTGTGAAGCCTTAAGACCCGGG
CTTGAAGATCCAGTAGTCAGCATCGAATTGGAGCCAGAGTTTAGACCAGG
AGTAGAAGCTGTTACCGGTGTTAGGGGCGGCACGGGCTTGGGATTCGGTG
GCTGAGTCTCAGGGACCTTGTCCTTCAATTCGGCCATTGTACCCATCTGA
CACTGCCGCCAGGTGGGCAGCATCAGTCCACGGCTCACAGTCGGCGAGGG
CAGAGATGCCTGGCTGGGAATAAGGGACTTCACCGGCGTATGGATCGCTC
TCTTGCTCAGCTCCTCTGTCCGCTCCAGGTTGGCCATCTTCAAGTCCTCG
ATACTCACTTTGGTGCGATTGACCAACTTTGCGAAACGTTGAGCCTCGAC
GAGTTTGTCCCTTGCCAAAGTATAAGCCAGATCCAAGATGACCCCACGAG
CCTGCGGCTCCACCTCCAATTGCAGGTCCTTCAGCATACCCTCTACGAAC
TCCAGATCAGAGCGGATGTCTAAGTCGCGCTCGCTTAGCTTGTATTCTGG
TTTTTTGTTCCTGTCCACTGATAACT
BO14495.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14930-PA | 747 | CG14930-RA | 3..744 | 760..19 | 3660 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:38:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14930-RA | 866 | CG14930-RA | 29..770 | 760..19 | 3680 | 99.7 | Minus |
CG14929-RA | 1515 | CG14929-RA | 527..1126 | 21..620 | 2985 | 99.8 | Plus |
CG14929-RA | 1515 | CG14929-RA | 1189..1328 | 621..760 | 685 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:38:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11520454..11521055 | 19..620 | 2995 | 99.8 | Plus |
2L | 23513712 | 2L | 11521118..11521257 | 621..760 | 685 | 99.3 | Plus |
Blast to na_te.dros performed on 2015-02-10 22:38:10 has no hits.
BO14495.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:29:44 Download gff for
BO14495.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14930-PA | 1..747 | 16..762 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:26:14 Download gff for
BO14495.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14930-PA | 1..747 | 16..762 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 07:48:18 Download gff for
BO14495.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14930-RA | 22..774 | 15..768 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:04:09 Download gff for
BO14495.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14930-RA | 22..774 | 15..768 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:04:09 Download gff for
BO14495.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11520449..11521055 | 15..620 | 99 | <- | Plus |
2L | 11521118..11521264 | 621..768 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 07:48:18 Download gff for
BO14495.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11521118..11521264 | 621..768 | 96 | | Plus |
arm_2L | 11520449..11521055 | 15..620 | 99 | <- | Plus |
BO14495.5prime Sequence
776 bp (770 high quality bases) assembled on 2006-05-29
> BO14495.5prime
GAAGTTATCAGTCGACATGAACAAAAAACCAGAATACAAGCTAAGCGAGC
GCGACTTAGACATCCGCTCTGATCTGGAGTTCGTAGATGGTATGCTGAAG
GACCTGCAATTGGAGGTGGAGCCGCAGGCTCGTGGGGTCATCTTGGATCT
GGCTTATACTTTGGCAAGGGACAAACTCGTCGAGGCTCAACGTTTCGCAA
AGTTGGTCAATCGCACCAAAGTGAGTATCGAGGACTTGAAGATGGCCAAC
CTGGAGCGGACAGAGGAGCTGAGCAAGAGAGCGATCCATACGCCGGTGAA
GTCCCTTATTCCCAGCCAGGCATCTCTGCCCTCGCCGACTGTGAGCCGTG
GACTGATGCTGCCCACCTGGCGGCAGTGTCAGATGGGTACAATGGCCGAA
TTGAAGGACAAGGTCCCTGAGACTCAGCCACCGAATCCCAAGCCCGTGCC
GCCCCTAACACCGGTAACAGCTTCTACTCCTGGTCTAAACTCTGGCTCCA
ATTCGATGCTGACTACTGGATCTTCAAGCCCGGGTCTTAAGGCTTCACAC
TCCCTTGCTCCTCCCATTGGCACCAAGGCGAATCTTTTCGACAATTTTAC
CTTGCCAACGATTTTACCCGATAGAGTTCGCAAGGATGCTCGTGGTAGCG
CAATAAGAAGTCATTCTACTCCTAGGATGTACATCAATAGATCCTATAGC
TCGATGGCTGACGCAGCAGGAGGATCTCCCTCGGTCACAAAGAAACCACG
CATGCAACTAGCAAGCTTTCTAAACC
BO14495.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14930-PA | 747 | CG14930-RA | 1..744 | 17..760 | 3695 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:53:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14930-RA | 866 | CG14930-RA | 27..770 | 17..760 | 3705 | 99.9 | Plus |
CG14929-RA | 1515 | CG14929-RA | 527..1126 | 758..159 | 2985 | 99.8 | Minus |
CG14929-RA | 1515 | CG14929-RA | 1189..1330 | 158..17 | 710 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:53:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11520454..11521055 | 760..159 | 2995 | 99.8 | Minus |
2L | 23513712 | 2L | 11521118..11521259 | 158..17 | 710 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 00:53:22 has no hits.
BO14495.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:29:45 Download gff for
BO14495.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14930-PA | 1..747 | 17..763 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:26:15 Download gff for
BO14495.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14930-PA | 1..747 | 17..763 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:34:27 Download gff for
BO14495.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14930-RA | 22..774 | 11..764 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:22:09 Download gff for
BO14495.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14930-RA | 22..774 | 11..764 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:22:09 Download gff for
BO14495.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11521118..11521264 | 11..158 | 97 | | Minus |
2L | 11520450..11521055 | 159..765 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:34:27 Download gff for
BO14495.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11520450..11521055 | 159..765 | 99 | <- | Minus |
arm_2L | 11521118..11521264 | 11..158 | 97 | | Minus |
BO14495.complete Sequence
778 bp assembled on 2006-10-11
GenBank Submission: FJ638729
> BO14495.complete
GAAGTTATCAGTCGACATGAACAAAAAACCAGAATACAAGCTAAGCGAGC
GCGACTTAGACATCCGCTCTGATCTGGAGTTCGTAGATGGTATGCTGAAG
GACCTGCAATTGGAGGTGGAGCCGCAGGCTCGTGGGGTCATCTTGGATCT
GGCTTATACTTTGGCAAGGGACAAACTCGTCGAGGCTCAACGTTTCGCAA
AGTTGGTCAATCGCACCAAAGTGAGTATCGAGGACTTGAAGATGGCCAAC
CTGGAGCGGACAGAGGAGCTGAGCAAGAGAGCGATCCATACGCCGGTGAA
GTCCCTTATTCCCAGCCAGGCATCTCTGCCCTCGCCGACTGTGAGCCGTG
GACTGATGCTGCCCACCTGGCGGCAGTGTCAGATGGGTACAATGGCCGAA
TTGAAGGACAAGGTCCCTGAGACTCAGCCACCGAATCCCAAGCCCGTGCC
GCCCCTAACACCGGTAACAGCTTCTACTCCTGGTCTAAACTCTGGCTCCA
ATTCGATGCTGACTACTGGATCTTCAAGCCCGGGTCTTAAGGCTTCACAC
TCCCTTGCTCCTCCCATTGGCACCAAGGCGAATCTTTTCGACAATTTTAC
CTTGCCAACGATTTTACCCGATAGAGTTCGCAAGGATGCTCGTGGTAGCG
CAATAAGAAGTCATTCTACTCCTAGGATGTACATCAATAGATCCTATAGC
TCGATGGCTGACGCAGCAGGAGGATCTCCCTCGGTCACAAAGAAACCACG
CATGCAACTAGCAAGCTTTCTAGACCAT
BO14495.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:46:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14930-RA | 747 | CG14930-PA | 1..744 | 17..760 | 3705 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:46:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14930-RA | 866 | CG14930-RA | 27..770 | 17..760 | 3705 | 99.9 | Plus |
CG14929-RA | 1515 | CG14929-RA | 527..1126 | 758..159 | 2985 | 99.8 | Minus |
CG14929-RA | 1515 | CG14929-RA | 1189..1330 | 158..17 | 710 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:46:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11520454..11521055 | 760..159 | 2995 | 99.8 | Minus |
2L | 23513712 | 2L | 11521118..11521259 | 158..17 | 710 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:46:10 has no hits.
BO14495.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:36:07 Download gff for
BO14495.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14930-RA | 1..747 | 17..763 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:51:38 Download gff for
BO14495.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14930-RA | 22..774 | 11..764 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:13:24 Download gff for
BO14495.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14930-RA | 27..770 | 17..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:36:07 Download gff for
BO14495.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14930-RA | 22..774 | 11..764 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:26:05 Download gff for
BO14495.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14930-RA | 27..770 | 17..762 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:26:05 Download gff for
BO14495.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11520451..11521055 | 159..762 | 99 | <- | Minus |
2L | 11521118..11521259 | 17..158 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:13:24 Download gff for
BO14495.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11520451..11521055 | 159..762 | 99 | <- | Minus |
arm_2L | 11521118..11521259 | 17..158 | 100 | | Minus |
BO14495.pep Sequence
Translation from 16 to 778
> BO14495.pep
MNKKPEYKLSERDLDIRSDLEFVDGMLKDLQLEVEPQARGVILDLAYTLA
RDKLVEAQRFAKLVNRTKVSIEDLKMANLERTEELSKRAIHTPVKSLIPS
QASLPSPTVSRGLMLPTWRQCQMGTMAELKDKVPETQPPNPKPVPPLTPV
TASTPGLNSGSNSMLTTGSSSPGLKASHSLAPPIGTKANLFDNFTLPTIL
PDRVRKDARGSAIRSHSTPRMYINRSYSSMADAAGGSPSVTKKPRMQLAS
FLDH
BO14495.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:56:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14930-PA | 248 | CG14930-PA | 1..248 | 1..248 | 1259 | 100 | Plus |