Clone BO14495 Report

Search the DGRC for BO14495

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:144
Well:95
Vector:pDNR-Dual
Associated Gene/TranscriptCG14930-RA
Protein status:BO14495.pep: validated full length
Sequenced Size:778

Clone Sequence Records

BO14495.3prime Sequence

776 bp (687 high quality bases) assembled on 2006-05-29

> BO14495.3prime
ATGGTCTAGAAAGCTTGCTAGTTGCATGCGTGGTTTCTTTGTGACCGAGG
GAGATCCTCCTGCTGCGTCAGCCATCGAGCTATAGGATCTATTGATGTAC
ATCCTAGGAGTAGAATGACTTCTTATTGCGCTACCACGAGCATCCTTGCG
AACTCTATCGGGTAAAATCGTTGGCAAGGTAAAATTGTCGAAAAGATTCG
CCTTGGTGCCAATGGGAGGAGCAAGGGAGTGTGAAGCCTTAAGACCCGGG
CTTGAAGATCCAGTAGTCAGCATCGAATTGGAGCCAGAGTTTAGACCAGG
AGTAGAAGCTGTTACCGGTGTTAGGGGCGGCACGGGCTTGGGATTCGGTG
GCTGAGTCTCAGGGACCTTGTCCTTCAATTCGGCCATTGTACCCATCTGA
CACTGCCGCCAGGTGGGCAGCATCAGTCCACGGCTCACAGTCGGCGAGGG
CAGAGATGCCTGGCTGGGAATAAGGGACTTCACCGGCGTATGGATCGCTC
TCTTGCTCAGCTCCTCTGTCCGCTCCAGGTTGGCCATCTTCAAGTCCTCG
ATACTCACTTTGGTGCGATTGACCAACTTTGCGAAACGTTGAGCCTCGAC
GAGTTTGTCCCTTGCCAAAGTATAAGCCAGATCCAAGATGACCCCACGAG
CCTGCGGCTCCACCTCCAATTGCAGGTCCTTCAGCATACCCTCTACGAAC
TCCAGATCAGAGCGGATGTCTAAGTCGCGCTCGCTTAGCTTGTATTCTGG
TTTTTTGTTCCTGTCCACTGATAACT

BO14495.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG14930-PA 747 CG14930-RA 3..744 760..19 3660 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:38:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG14930-RA 866 CG14930-RA 29..770 760..19 3680 99.7 Minus
CG14929-RA 1515 CG14929-RA 527..1126 21..620 2985 99.8 Plus
CG14929-RA 1515 CG14929-RA 1189..1328 621..760 685 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:38:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11520454..11521055 19..620 2995 99.8 Plus
2L 23513712 2L 11521118..11521257 621..760 685 99.3 Plus
Blast to na_te.dros performed on 2015-02-10 22:38:10 has no hits.

BO14495.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:29:44 Download gff for BO14495.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14930-PA 1..747 16..762 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:26:14 Download gff for BO14495.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14930-PA 1..747 16..762 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 07:48:18 Download gff for BO14495.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14930-RA 22..774 15..768 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:04:09 Download gff for BO14495.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14930-RA 22..774 15..768 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:04:09 Download gff for BO14495.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 11520449..11521055 15..620 99 <- Plus
2L 11521118..11521264 621..768 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 07:48:18 Download gff for BO14495.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11521118..11521264 621..768 96   Plus
arm_2L 11520449..11521055 15..620 99 <- Plus

BO14495.5prime Sequence

776 bp (770 high quality bases) assembled on 2006-05-29

> BO14495.5prime
GAAGTTATCAGTCGACATGAACAAAAAACCAGAATACAAGCTAAGCGAGC
GCGACTTAGACATCCGCTCTGATCTGGAGTTCGTAGATGGTATGCTGAAG
GACCTGCAATTGGAGGTGGAGCCGCAGGCTCGTGGGGTCATCTTGGATCT
GGCTTATACTTTGGCAAGGGACAAACTCGTCGAGGCTCAACGTTTCGCAA
AGTTGGTCAATCGCACCAAAGTGAGTATCGAGGACTTGAAGATGGCCAAC
CTGGAGCGGACAGAGGAGCTGAGCAAGAGAGCGATCCATACGCCGGTGAA
GTCCCTTATTCCCAGCCAGGCATCTCTGCCCTCGCCGACTGTGAGCCGTG
GACTGATGCTGCCCACCTGGCGGCAGTGTCAGATGGGTACAATGGCCGAA
TTGAAGGACAAGGTCCCTGAGACTCAGCCACCGAATCCCAAGCCCGTGCC
GCCCCTAACACCGGTAACAGCTTCTACTCCTGGTCTAAACTCTGGCTCCA
ATTCGATGCTGACTACTGGATCTTCAAGCCCGGGTCTTAAGGCTTCACAC
TCCCTTGCTCCTCCCATTGGCACCAAGGCGAATCTTTTCGACAATTTTAC
CTTGCCAACGATTTTACCCGATAGAGTTCGCAAGGATGCTCGTGGTAGCG
CAATAAGAAGTCATTCTACTCCTAGGATGTACATCAATAGATCCTATAGC
TCGATGGCTGACGCAGCAGGAGGATCTCCCTCGGTCACAAAGAAACCACG
CATGCAACTAGCAAGCTTTCTAAACC

BO14495.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG14930-PA 747 CG14930-RA 1..744 17..760 3695 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:53:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG14930-RA 866 CG14930-RA 27..770 17..760 3705 99.9 Plus
CG14929-RA 1515 CG14929-RA 527..1126 758..159 2985 99.8 Minus
CG14929-RA 1515 CG14929-RA 1189..1330 158..17 710 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:53:19
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11520454..11521055 760..159 2995 99.8 Minus
2L 23513712 2L 11521118..11521259 158..17 710 100 Minus
Blast to na_te.dros performed on 2015-02-12 00:53:22 has no hits.

BO14495.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:29:45 Download gff for BO14495.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14930-PA 1..747 17..763 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:26:15 Download gff for BO14495.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14930-PA 1..747 17..763 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:34:27 Download gff for BO14495.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14930-RA 22..774 11..764 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:22:09 Download gff for BO14495.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14930-RA 22..774 11..764 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:22:09 Download gff for BO14495.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 11521118..11521264 11..158 97   Minus
2L 11520450..11521055 159..765 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:34:27 Download gff for BO14495.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11520450..11521055 159..765 99 <- Minus
arm_2L 11521118..11521264 11..158 97   Minus

BO14495.complete Sequence

778 bp assembled on 2006-10-11

GenBank Submission: FJ638729

> BO14495.complete
GAAGTTATCAGTCGACATGAACAAAAAACCAGAATACAAGCTAAGCGAGC
GCGACTTAGACATCCGCTCTGATCTGGAGTTCGTAGATGGTATGCTGAAG
GACCTGCAATTGGAGGTGGAGCCGCAGGCTCGTGGGGTCATCTTGGATCT
GGCTTATACTTTGGCAAGGGACAAACTCGTCGAGGCTCAACGTTTCGCAA
AGTTGGTCAATCGCACCAAAGTGAGTATCGAGGACTTGAAGATGGCCAAC
CTGGAGCGGACAGAGGAGCTGAGCAAGAGAGCGATCCATACGCCGGTGAA
GTCCCTTATTCCCAGCCAGGCATCTCTGCCCTCGCCGACTGTGAGCCGTG
GACTGATGCTGCCCACCTGGCGGCAGTGTCAGATGGGTACAATGGCCGAA
TTGAAGGACAAGGTCCCTGAGACTCAGCCACCGAATCCCAAGCCCGTGCC
GCCCCTAACACCGGTAACAGCTTCTACTCCTGGTCTAAACTCTGGCTCCA
ATTCGATGCTGACTACTGGATCTTCAAGCCCGGGTCTTAAGGCTTCACAC
TCCCTTGCTCCTCCCATTGGCACCAAGGCGAATCTTTTCGACAATTTTAC
CTTGCCAACGATTTTACCCGATAGAGTTCGCAAGGATGCTCGTGGTAGCG
CAATAAGAAGTCATTCTACTCCTAGGATGTACATCAATAGATCCTATAGC
TCGATGGCTGACGCAGCAGGAGGATCTCCCTCGGTCACAAAGAAACCACG
CATGCAACTAGCAAGCTTTCTAGACCAT

BO14495.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:46:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG14930-RA 747 CG14930-PA 1..744 17..760 3705 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:46:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG14930-RA 866 CG14930-RA 27..770 17..760 3705 99.9 Plus
CG14929-RA 1515 CG14929-RA 527..1126 758..159 2985 99.8 Minus
CG14929-RA 1515 CG14929-RA 1189..1330 158..17 710 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:46:09
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11520454..11521055 760..159 2995 99.8 Minus
2L 23513712 2L 11521118..11521259 158..17 710 100 Minus
Blast to na_te.dros performed on 2014-11-27 08:46:10 has no hits.

BO14495.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:36:07 Download gff for BO14495.complete
Subject Subject Range Query Range Percent Splice Strand
CG14930-RA 1..747 17..763 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:51:38 Download gff for BO14495.complete
Subject Subject Range Query Range Percent Splice Strand
CG14930-RA 22..774 11..764 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:13:24 Download gff for BO14495.complete
Subject Subject Range Query Range Percent Splice Strand
CG14930-RA 27..770 17..762 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:36:07 Download gff for BO14495.complete
Subject Subject Range Query Range Percent Splice Strand
CG14930-RA 22..774 11..764 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:26:05 Download gff for BO14495.complete
Subject Subject Range Query Range Percent Splice Strand
CG14930-RA 27..770 17..762 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:26:05 Download gff for BO14495.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11520451..11521055 159..762 99 <- Minus
2L 11521118..11521259 17..158 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:13:24 Download gff for BO14495.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11520451..11521055 159..762 99 <- Minus
arm_2L 11521118..11521259 17..158 100   Minus

BO14495.pep Sequence

Translation from 16 to 778

> BO14495.pep
MNKKPEYKLSERDLDIRSDLEFVDGMLKDLQLEVEPQARGVILDLAYTLA
RDKLVEAQRFAKLVNRTKVSIEDLKMANLERTEELSKRAIHTPVKSLIPS
QASLPSPTVSRGLMLPTWRQCQMGTMAELKDKVPETQPPNPKPVPPLTPV
TASTPGLNSGSNSMLTTGSSSPGLKASHSLAPPIGTKANLFDNFTLPTIL
PDRVRKDARGSAIRSHSTPRMYINRSYSSMADAAGGSPSVTKKPRMQLAS
FLDH

BO14495.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:56:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG14930-PA 248 CG14930-PA 1..248 1..248 1259 100 Plus