Clone BO14506 Report

Search the DGRC for BO14506

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:145
Well:6
Vector:pDNR-Dual
Associated Gene/TranscriptCG8455-RB
Protein status:BO14506.pep: validated full length
Sequenced Size:1144

Clone Sequence Records

BO14506.3prime Sequence

915 bp (851 high quality bases) assembled on 2006-05-29

> BO14506.3prime
ATGGTCTAGAAAGCTTGCGTCTAAATAATTAACCTTCCGATGATCTACAG
CCGACGACTGTCTTCTGCTTTGGATGCACTTTCGTAGCTGGAACCCGATG
ACAATTAGGCAAAGAATGCCAGCACTCAGATAGCTATTGAAGACAAACTG
CTGTGGCAGCATTTTGCACTTGGAAACCACATAGTCATCGGGGGTTATAG
TGGCCAGCATAAAGCTGGGATTAACTTTGTTTCGCCAGCTGAATGAGGCC
ACCGTGTACTCATCGATGCCCAGTCGATTTACACTGTGACAGAAGTGATG
TGAATGACCGGCGAATGCCAGCCTTGGCTTAAGAAGCTCTCCCAGCATAT
CCGTGGCATCCTTGGAGAGCACATGAAACCGCTCTCGGAACGCCTCGATG
TACGGAGCATCGTGCTCCTCGCACATGGTATCCGAAATGCGGTAGGTGGG
AAAGTGCTGCAATAGAATTGGCTGGCTGTACGGGTGCCGCCTGGTGCGAG
CGCACTCCGCCTCTAGTGGATACTTCATGCAGTACAAAGTCCGCGAAATG
TTTTTCAACTGATCCTCGGCCTGGGTGCAAAACATGCAACCATCACCTTC
CATAGCCATCGAATTTATCACCACAAAATGGATTTGTTTAATGGTGTACA
AATTGACCGAGGAGTTGTTCAGATAACTCTCAAAACGCGACATAAAGAAG
GGATGCATTTTGTAATGGAAGCCCACGTCATGATTTCCCGCGACACTGAT
GAGCGGAATTCCCGGTGGTAGGTGGAACATCTTCAGGTAGCGCCACACAT
ATTCCTGAAACTGCTTGTCGCTGACCATGTCGCCCTCGTCGAACAAATCG
CCCAAGACGAAGACCACGTCGGGCTGGAACAGACGTGATGCCGCCTGAAA
GGCCCGCGTCATGTG

BO14506.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG8455-PB 1113 CG8455-RB 214..1110 915..19 4410 99.6 Minus
CG8455-PA 1104 CG8455-RA 214..1103 915..26 4375 99.6 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 18:50:19
Subject Length Description Subject Range Query Range Score Percent Strand
PGAP5-RB 1500 CG8455-RB 304..1200 915..19 4440 99.7 Minus
PGAP5-RC 1566 CG8455-RC 375..1264 915..26 4405 99.7 Minus
PGAP5-RA 1565 CG8455-RA 304..1193 915..26 4405 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:50:12
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8199529..8200034 709..204 2500 99.6 Minus
2L 23513712 2L 8199256..8199461 915..710 1015 99.5 Minus
2L 23513712 2L 8200101..8200280 205..26 900 100 Minus
Blast to na_te.dros performed on 2015-01-30 18:50:16 has no hits.

BO14506.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:29:57 Download gff for BO14506.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8455-PB 214..1113 18..915 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:26:33 Download gff for BO14506.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8455-PB 214..1113 18..915 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 19:02:38 Download gff for BO14506.3prime
Subject Subject Range Query Range Percent Splice Strand
PGAP5-RB 304..1200 19..915 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:15:25 Download gff for BO14506.3prime
Subject Subject Range Query Range Percent Splice Strand
PGAP5-RB 304..1200 19..915 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:15:25 Download gff for BO14506.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 8199256..8199461 710..915 99 -> Minus
2L 8199529..8200033 205..709 99 -> Minus
2L 8200102..8200280 26..204 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 19:02:38 Download gff for BO14506.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8199256..8199461 710..915 99 -> Minus
arm_2L 8199529..8200033 205..709 99 -> Minus
arm_2L 8200102..8200280 26..204 100   Minus

BO14506.5prime Sequence

816 bp (801 high quality bases) assembled on 2006-05-29

> BO14506.5prime
GAAGTTATCAGTCGACATGCGCTTTCTTTATGCCTGCTTTGTGATCGTGC
TGTGCGCCCTGATCTTCTGCGAATATGTGGCGGACTTTGTGGTGCTGCAA
AAGTGCAAGTGGCCGGAGATAAAGCGAAAGAAGTATGTGGACGATCCGCT
TAGGGCAATGATTCTAGCGGATCCGCATCTGCTGGGACCGCATCGTGGTC
ACTGGCTGGACAAGCTCTACCGGGAGTGGCACATGACGCGGGCCTTTCAG
GCGGCATCACGTCTGTTCCAGCCCGACGTGGTCTTCGTCTTGGGCGATTT
GTTCGACGAGGGCGACATGGTCAGCGACAAGCAGTTTCAGGAATATGTGT
GGCGCTACCTGAAGATGTTCCACCTACCACCGGGAATTCCGCTCATCAGT
GTCGCGGGAAATCATGACGTGGGCTTCCATTACAAAATGCATCCCTTCTT
TATGTCGCGTTTTGAGAGTTATCTGAACAACTCCTCGGTCAATTTGTACA
CCATTAAACAAATCCATTTTGTGGTGATAAATTCGATGGCTATGGAAGGT
GATGGTTGCATGTTTTGCACCCAGGCCGAGGATCAGTTGAAAAACATTTC
GCGGACTTTGTACTGCATGAAGTATCCACTAGAGGCGGAGTGCGCTCGCA
CCAGGCGGCACCCGTACAGCCAGCCAATTCTATTGCAGCACTTTCCCACC
TACCGCATTTCGGATACCATGTGCGAGGAGCACGATGCTCCGTACATCGA
GGCGTTCCGAGAGCGGTTTCATGTGCTCTCCAAGGATGCCACGGATATGC
TGGGAGAGCTTCTTAA

BO14506.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG8455-PA 1104 CG8455-RA 1..800 17..816 3925 99.6 Plus
CG8455-PB 1113 CG8455-RB 1..800 17..816 3925 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:59:24
Subject Length Description Subject Range Query Range Score Percent Strand
PGAP5-RC 1566 CG8455-RC 162..961 17..816 3955 99.6 Plus
PGAP5-RB 1500 CG8455-RB 91..890 17..816 3955 99.6 Plus
PGAP5-RA 1565 CG8455-RA 91..890 17..816 3955 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:59:18
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8199043..8199461 17..435 2080 99.8 Plus
2L 23513712 2L 8199529..8199909 436..816 1875 99.5 Plus
Blast to na_te.dros performed on 2015-02-10 21:59:22 has no hits.

BO14506.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:29:58 Download gff for BO14506.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8455-PA 1..798 17..814 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:26:35 Download gff for BO14506.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8455-PB 1..798 17..814 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 00:52:51 Download gff for BO14506.5prime
Subject Subject Range Query Range Percent Splice Strand
PGAP5-RA 83..890 7..816 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:52:49 Download gff for BO14506.5prime
Subject Subject Range Query Range Percent Splice Strand
PGAP5-RA 83..890 7..816 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:52:49 Download gff for BO14506.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 8199529..8199909 436..816 99   Plus
2L 8199035..8199461 7..435 98 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 00:52:51 Download gff for BO14506.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8199035..8199461 7..435 98 -> Plus
arm_2L 8199529..8199909 436..816 99   Plus

BO14506.complete Sequence

1144 bp assembled on 2006-10-11

GenBank Submission: FJ633157

> BO14506.complete
GAAGTTATCAGTCGACATGCGCTTTCTTTATGCCTGCTTTGTGATCGTGC
TGTGCGCCCTGATCTTCTGCGAATATGTGGCGGACTTTGTGGTGCTGCAA
AAGTGCAAGTGGCCGGAGATAAAGCGAAAGAAGTATGTGGACGATCCGCT
TAGGGCAATGATTCTAGCGGATCCGCATCTGCTGGGACCGCATCGTGGTC
ACTGGCTGGACAAGCTCTACCGGGAGTGGCACATGACGCGGGCCTTTCAG
GCGGCATCACGTCTGTTCCAGCCCGACGTGGTCTTCGTCTTGGGCGATTT
GTTCGACGAGGGCGACATGGTCAGCGACAAGCAGTTTCAGGAATATGTGT
GGCGCTACCTGAAGATGTTCCACCTACCACCGGGAATTCCGCTCATCAGT
GTCGCGGGAAATCATGACGTGGGCTTCCATTACAAAATGCATCCCTTCTT
TATGTCGCGTTTTGAGAGTTATCTGAACAACTCCTCGGTCAATTTGTACA
CCATTAAACAAATCCATTTTGTGGTGATAAATTCGATGGCTATGGAAGGT
GATGGTTGCATGTTTTGCACCCAGGCCGAGGATCAGTTGAAAAACATTTC
GCGGACTTTGTACTGCATGAAGTATCCACTAGAGGCGGAGTGCGCTCGCA
CCAGGCGGCACCCGTACAGCCAGCCAATTCTATTGCAGCACTTTCCCACC
TACCGCATTTCGGATACCATGTGCGAGGAGCACGATGCTCCGTACATCGA
GGCGTTCCGAGAGCGGTTTCATGTGCTCTCCAAGGATGCCACGGATATGC
TGGGAGAGCTTCTTAAGCCAAGGCTGGCATTCGCCGGTCATTCACATCAC
TTCTGTCACAGTGTAAATCGACTGGGCATCGATGAGTACACGGTGGCCTC
ATTCAGCTGGCGAAACAAAGTTAATCCCAGCTTTATGCTGGCCACTATAA
CCCCCGATGACTATGTGGTTTCCAAGTGCAAAATGCTGCCACAGCAGTTT
GTCTTCAATAGCTATCTGAGTGCTGGCATTCTTTGCCTAATTGTCATCGG
GTTCCAGCTACGAAAGTGCATCCAAAGCAGAAGACAGTCGTCGGCTGTAG
ATCATCGGAAGGTTAATTATTTAGACGCAAGCTTTCTAGACCAT

BO14506.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:59:50
Subject Length Description Subject Range Query Range Score Percent Strand
PGAP5-RB 1113 CG8455-PB 1..1110 17..1126 5505 99.7 Plus
PGAP5-RC 1104 CG8455-PC 1..1103 17..1119 5470 99.7 Plus
PGAP5-RA 1104 CG8455-PA 1..1103 17..1119 5470 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:59:51
Subject Length Description Subject Range Query Range Score Percent Strand
PGAP5-RB 1500 CG8455-RB 91..1200 17..1126 5505 99.7 Plus
PGAP5-RC 1566 CG8455-RC 162..1264 17..1119 5470 99.7 Plus
PGAP5-RA 1565 CG8455-RA 91..1193 17..1119 5470 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:59:48
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8199529..8200034 436..941 2500 99.6 Plus
2L 23513712 2L 8199043..8199461 17..435 2080 99.8 Plus
2L 23513712 2L 8200101..8200280 940..1119 900 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:59:49 has no hits.

BO14506.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:35:33 Download gff for BO14506.complete
Subject Subject Range Query Range Percent Splice Strand
CG8455-RB 1..1113 17..1127 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:51:16 Download gff for BO14506.complete
Subject Subject Range Query Range Percent Splice Strand
CG8455-RB 77..1194 7..1126 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:04:10 Download gff for BO14506.complete
Subject Subject Range Query Range Percent Splice Strand
PGAP5-RB 91..1200 17..1128 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:35:36 Download gff for BO14506.complete
Subject Subject Range Query Range Percent Splice Strand
CG8455-RB 77..1194 7..1126 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:30:39 Download gff for BO14506.complete
Subject Subject Range Query Range Percent Splice Strand
PGAP5-RB 91..1200 17..1128 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:30:39 Download gff for BO14506.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8199043..8199461 17..435 99 -> Plus
2L 8199529..8200033 436..940 99 -> Plus
2L 8200102..8200280 941..1119 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:04:10 Download gff for BO14506.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8199043..8199461 17..435 99 -> Plus
arm_2L 8199529..8200033 436..940 99 -> Plus
arm_2L 8200102..8200280 941..1119 100   Plus

BO14506.pep Sequence

Translation from 16 to 1144

> BO14506.pep
MRFLYACFVIVLCALIFCEYVADFVVLQKCKWPEIKRKKYVDDPLRAMIL
ADPHLLGPHRGHWLDKLYREWHMTRAFQAASRLFQPDVVFVLGDLFDEGD
MVSDKQFQEYVWRYLKMFHLPPGIPLISVAGNHDVGFHYKMHPFFMSRFE
SYLNNSSVNLYTIKQIHFVVINSMAMEGDGCMFCTQAEDQLKNISRTLYC
MKYPLEAECARTRRHPYSQPILLQHFPTYRISDTMCEEHDAPYIEAFRER
FHVLSKDATDMLGELLKPRLAFAGHSHHFCHSVNRLGIDEYTVASFSWRN
KVNPSFMLATITPDDYVVSKCKMLPQQFVFNSYLSAGILCLIVIGFQLRK
CIQSRRQSSAVDHRKVNYLDASFLDH

BO14506.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:57:38
Subject Length Description Subject Range Query Range Score Percent Strand
PGAP5-PB 370 CG8455-PB 1..370 1..370 2005 100 Plus
PGAP5-PC 367 CG8455-PC 1..367 1..367 1988 100 Plus
PGAP5-PA 367 CG8455-PA 1..367 1..367 1988 100 Plus