Clone BO14507 Report

Search the DGRC for BO14507

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:145
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptCG17329-RA
Protein status:BO14507.pep: validated full length
Sequenced Size:520

Clone Sequence Records

BO14507.3prime Sequence

518 bp (517 high quality bases) assembled on 2006-05-29

> BO14507.3prime
ATGGTCTAGAAAGCTTGCATGAGACAAAAAGCTCGGACTGTAGATCCTGC
GCACGTGGAAGTGGCGAGCCCGTCGCCGGCAGATTGGGCAGCGATGATTG
CGCCGAATGGCCATGTGGATGCAGCTGGAGCCAAACAAATGGCCACAACG
GAGCGAGACCAGGCGATGTATTCCGTTGTCCGTCCAGGGCAACAGGCAAA
TGGAGCAAGTTGAATTCTCCACCATTCTGTCCAGACGCTGATTGAGTGTC
TTCACACCCGAATGGAGCTCTGCGATGAGAACGAGTTCGCCAATCCTGTG
CAAACGTTCCTCCAGGGTGGCATACTGCAGCATCTTTCCCTGCAACAGGC
GTAGGATGCGACGACGCTGAGTATTCAGATGCTTCACCCGCAAATTGTGA
TCCCTGAGCTTGCGGACTTGCTCCTCCAGATTGCCATTGGACGGCTCCGT
CGGCTCCTGCTGCTGCTGCTCCGTGCGCTCAAGTTCCTTCTCGATTTTCT
CCATGTCGACTGATAACT

BO14507.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG17329-PA 489 CG17329-RA 1..486 504..19 2430 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:01:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG17329-RA 665 CG17329-RA 59..544 504..19 2430 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:01:11
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16291342..16291827 504..19 2430 100 Minus
Blast to na_te.dros performed on 2015-02-10 23:01:14 has no hits.

BO14507.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:29:59 Download gff for BO14507.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17329-PA 1..489 15..504 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:26:36 Download gff for BO14507.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17329-PA 1..489 15..504 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:14:51 Download gff for BO14507.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17329-RA 47..549 11..516 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:14:14 Download gff for BO14507.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17329-RA 47..549 11..516 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:14:14 Download gff for BO14507.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 16291330..16291832 11..516 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:14:51 Download gff for BO14507.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16291330..16291832 11..516 98   Minus

BO14507.5prime Sequence

518 bp (517 high quality bases) assembled on 2006-05-29

> BO14507.5prime
GAAGTTATCAGTCGACATGGAGAAAATCGAGAAGGAACTTGAGCGCACGG
AGCAGCAGCAGCAGGAGCCGACGGAGCCGTCCAATGGCAATCTGGAGGAG
CAAGTCCGCAAGCTCAGGGATCACAATTTGCGGGTGAAGCATCTGAATAC
TCAGCGTCGTCGCATCCTACGCCTGTTGCAGGGAAAGATGCTGCAGTATG
CCACCCTGGAGGAACGTTTGCACAGGATTGGCGAACTCGTTCTCATCGCA
GAGCTCCATTCGGGTGTGAAGACACTCAATCAGCGTCTGGACAGAATGGT
GGAGAATTCAACTTGCTCCATTTGCCTGTTGCCCTGGACGGACAACGGAA
TACATCGCCTGGTCTCGCTCCGTTGTGGCCATTTGTTTGGCTCCAGCTGC
ATCCACATGGCCATTCGGCGCAATCATCGCTGCCCAATCTGCCGGCGACG
GGCTCGCCACTTCCACGTGCGCAGGATCTACAGTCCGAGCTTTTTGTCTC
ATGCAAGCTTTCTAGACC

BO14507.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG17329-PA 489 CG17329-RA 1..486 17..502 2430 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:57:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG17329-RA 665 CG17329-RA 59..544 17..502 2430 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:56:56
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16291342..16291827 17..502 2430 100 Plus
Blast to na_te.dros performed on 2015-02-12 06:57:00 has no hits.

BO14507.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:30:00 Download gff for BO14507.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17329-PA 1..489 17..506 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:26:38 Download gff for BO14507.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17329-PA 1..489 17..506 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 17:00:33 Download gff for BO14507.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17329-RA 47..549 5..510 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:20:08 Download gff for BO14507.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17329-RA 47..549 5..510 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:20:08 Download gff for BO14507.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 16291330..16291832 5..510 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 17:00:33 Download gff for BO14507.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16291330..16291832 5..510 98   Plus

BO14507.complete Sequence

520 bp assembled on 2006-10-11

GenBank Submission: FJ633158

> BO14507.complete
GAAGTTATCAGTCGACATGGAGAAAATCGAGAAGGAACTTGAGCGCACGG
AGCAGCAGCAGCAGGAGCCGACGGAGCCGTCCAATGGCAATCTGGAGGAG
CAAGTCCGCAAGCTCAGGGATCACAATTTGCGGGTGAAGCATCTGAATAC
TCAGCGTCGTCGCATCCTACGCCTGTTGCAGGGAAAGATGCTGCAGTATG
CCACCCTGGAGGAACGTTTGCACAGGATTGGCGAACTCGTTCTCATCGCA
GAGCTCCATTCGGGTGTGAAGACACTCAATCAGCGTCTGGACAGAATGGT
GGAGAATTCAACTTGCTCCATTTGCCTGTTGCCCTGGACGGACAACGGAA
TACATCGCCTGGTCTCGCTCCGTTGTGGCCATTTGTTTGGCTCCAGCTGC
ATCCACATGGCCATTCGGCGCAATCATCGCTGCCCAATCTGCCGGCGACG
GGCTCGCCACTTCCACGTGCGCAGGATCTACAGTCCGAGCTTTTTGTCTC
ATGCAAGCTTTCTAGACCAT

BO14507.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:19:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG17329-RA 489 CG17329-PA 1..486 17..502 2430 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:19:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG17329-RA 665 CG17329-RA 59..544 17..502 2430 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:19:37
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16291342..16291827 17..502 2430 100 Plus
Blast to na_te.dros performed on 2014-11-27 14:19:39 has no hits.

BO14507.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:35:38 Download gff for BO14507.complete
Subject Subject Range Query Range Percent Splice Strand
CG17329-RA 1..489 17..506 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:51:18 Download gff for BO14507.complete
Subject Subject Range Query Range Percent Splice Strand
CG17329-RA 47..549 5..510 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:40:00 Download gff for BO14507.complete
Subject Subject Range Query Range Percent Splice Strand
CG17329-RA 59..544 17..504 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:35:38 Download gff for BO14507.complete
Subject Subject Range Query Range Percent Splice Strand
CG17329-RA 47..549 5..510 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:08:47 Download gff for BO14507.complete
Subject Subject Range Query Range Percent Splice Strand
CG17329-RA 59..544 17..504 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:08:47 Download gff for BO14507.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16291342..16291827 17..504 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:40:00 Download gff for BO14507.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16291342..16291827 17..504 99   Plus

BO14507.pep Sequence

Translation from 16 to 520

> BO14507.pep
MEKIEKELERTEQQQQEPTEPSNGNLEEQVRKLRDHNLRVKHLNTQRRRI
LRLLQGKMLQYATLEERLHRIGELVLIAELHSGVKTLNQRLDRMVENSTC
SICLLPWTDNGIHRLVSLRCGHLFGSSCIHMAIRRNHRCPICRRRARHFH
VRRIYSPSFLSHASFLDH

BO14507.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:57:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG17329-PA 162 CG17329-PA 1..162 1..162 855 100 Plus
CG13481-PC 176 CG13481-PC 38..171 22..156 333 49.6 Plus
CG13481-PB 176 CG13481-PB 38..171 22..156 333 49.6 Plus
CG14983-PA 163 CG14983-PA 12..160 6..159 257 40.8 Plus
CG31807-PB 142 CG31807-PB 13..137 27..154 183 35.2 Plus