Clone Sequence Records
BO14507.3prime Sequence
518 bp (517 high quality bases) assembled on 2006-05-29
> BO14507.3prime
ATGGTCTAGAAAGCTTGCATGAGACAAAAAGCTCGGACTGTAGATCCTGC
GCACGTGGAAGTGGCGAGCCCGTCGCCGGCAGATTGGGCAGCGATGATTG
CGCCGAATGGCCATGTGGATGCAGCTGGAGCCAAACAAATGGCCACAACG
GAGCGAGACCAGGCGATGTATTCCGTTGTCCGTCCAGGGCAACAGGCAAA
TGGAGCAAGTTGAATTCTCCACCATTCTGTCCAGACGCTGATTGAGTGTC
TTCACACCCGAATGGAGCTCTGCGATGAGAACGAGTTCGCCAATCCTGTG
CAAACGTTCCTCCAGGGTGGCATACTGCAGCATCTTTCCCTGCAACAGGC
GTAGGATGCGACGACGCTGAGTATTCAGATGCTTCACCCGCAAATTGTGA
TCCCTGAGCTTGCGGACTTGCTCCTCCAGATTGCCATTGGACGGCTCCGT
CGGCTCCTGCTGCTGCTGCTCCGTGCGCTCAAGTTCCTTCTCGATTTTCT
CCATGTCGACTGATAACT
BO14507.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17329-PA | 489 | CG17329-RA | 1..486 | 504..19 | 2430 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:01:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17329-RA | 665 | CG17329-RA | 59..544 | 504..19 | 2430 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:01:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16291342..16291827 | 504..19 | 2430 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 23:01:14 has no hits.
BO14507.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:29:59 Download gff for
BO14507.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17329-PA | 1..489 | 15..504 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:26:36 Download gff for
BO14507.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17329-PA | 1..489 | 15..504 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:14:51 Download gff for
BO14507.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17329-RA | 47..549 | 11..516 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:14:14 Download gff for
BO14507.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17329-RA | 47..549 | 11..516 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:14:14 Download gff for
BO14507.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16291330..16291832 | 11..516 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:14:51 Download gff for
BO14507.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16291330..16291832 | 11..516 | 98 | | Minus |
BO14507.5prime Sequence
518 bp (517 high quality bases) assembled on 2006-05-29
> BO14507.5prime
GAAGTTATCAGTCGACATGGAGAAAATCGAGAAGGAACTTGAGCGCACGG
AGCAGCAGCAGCAGGAGCCGACGGAGCCGTCCAATGGCAATCTGGAGGAG
CAAGTCCGCAAGCTCAGGGATCACAATTTGCGGGTGAAGCATCTGAATAC
TCAGCGTCGTCGCATCCTACGCCTGTTGCAGGGAAAGATGCTGCAGTATG
CCACCCTGGAGGAACGTTTGCACAGGATTGGCGAACTCGTTCTCATCGCA
GAGCTCCATTCGGGTGTGAAGACACTCAATCAGCGTCTGGACAGAATGGT
GGAGAATTCAACTTGCTCCATTTGCCTGTTGCCCTGGACGGACAACGGAA
TACATCGCCTGGTCTCGCTCCGTTGTGGCCATTTGTTTGGCTCCAGCTGC
ATCCACATGGCCATTCGGCGCAATCATCGCTGCCCAATCTGCCGGCGACG
GGCTCGCCACTTCCACGTGCGCAGGATCTACAGTCCGAGCTTTTTGTCTC
ATGCAAGCTTTCTAGACC
BO14507.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17329-PA | 489 | CG17329-RA | 1..486 | 17..502 | 2430 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:57:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17329-RA | 665 | CG17329-RA | 59..544 | 17..502 | 2430 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:56:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16291342..16291827 | 17..502 | 2430 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 06:57:00 has no hits.
BO14507.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:30:00 Download gff for
BO14507.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17329-PA | 1..489 | 17..506 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:26:38 Download gff for
BO14507.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17329-PA | 1..489 | 17..506 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 17:00:33 Download gff for
BO14507.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17329-RA | 47..549 | 5..510 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:20:08 Download gff for
BO14507.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17329-RA | 47..549 | 5..510 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:20:08 Download gff for
BO14507.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16291330..16291832 | 5..510 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 17:00:33 Download gff for
BO14507.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16291330..16291832 | 5..510 | 98 | | Plus |
BO14507.complete Sequence
520 bp assembled on 2006-10-11
GenBank Submission: FJ633158
> BO14507.complete
GAAGTTATCAGTCGACATGGAGAAAATCGAGAAGGAACTTGAGCGCACGG
AGCAGCAGCAGCAGGAGCCGACGGAGCCGTCCAATGGCAATCTGGAGGAG
CAAGTCCGCAAGCTCAGGGATCACAATTTGCGGGTGAAGCATCTGAATAC
TCAGCGTCGTCGCATCCTACGCCTGTTGCAGGGAAAGATGCTGCAGTATG
CCACCCTGGAGGAACGTTTGCACAGGATTGGCGAACTCGTTCTCATCGCA
GAGCTCCATTCGGGTGTGAAGACACTCAATCAGCGTCTGGACAGAATGGT
GGAGAATTCAACTTGCTCCATTTGCCTGTTGCCCTGGACGGACAACGGAA
TACATCGCCTGGTCTCGCTCCGTTGTGGCCATTTGTTTGGCTCCAGCTGC
ATCCACATGGCCATTCGGCGCAATCATCGCTGCCCAATCTGCCGGCGACG
GGCTCGCCACTTCCACGTGCGCAGGATCTACAGTCCGAGCTTTTTGTCTC
ATGCAAGCTTTCTAGACCAT
BO14507.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:19:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17329-RA | 489 | CG17329-PA | 1..486 | 17..502 | 2430 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:19:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17329-RA | 665 | CG17329-RA | 59..544 | 17..502 | 2430 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:19:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16291342..16291827 | 17..502 | 2430 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:19:39 has no hits.
BO14507.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:35:38 Download gff for
BO14507.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17329-RA | 1..489 | 17..506 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:51:18 Download gff for
BO14507.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17329-RA | 47..549 | 5..510 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:40:00 Download gff for
BO14507.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17329-RA | 59..544 | 17..504 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:35:38 Download gff for
BO14507.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17329-RA | 47..549 | 5..510 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:08:47 Download gff for
BO14507.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17329-RA | 59..544 | 17..504 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:08:47 Download gff for
BO14507.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16291342..16291827 | 17..504 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:40:00 Download gff for
BO14507.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16291342..16291827 | 17..504 | 99 | | Plus |
BO14507.pep Sequence
Translation from 16 to 520
> BO14507.pep
MEKIEKELERTEQQQQEPTEPSNGNLEEQVRKLRDHNLRVKHLNTQRRRI
LRLLQGKMLQYATLEERLHRIGELVLIAELHSGVKTLNQRLDRMVENSTC
SICLLPWTDNGIHRLVSLRCGHLFGSSCIHMAIRRNHRCPICRRRARHFH
VRRIYSPSFLSHASFLDH
BO14507.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:57:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17329-PA | 162 | CG17329-PA | 1..162 | 1..162 | 855 | 100 | Plus |
CG13481-PC | 176 | CG13481-PC | 38..171 | 22..156 | 333 | 49.6 | Plus |
CG13481-PB | 176 | CG13481-PB | 38..171 | 22..156 | 333 | 49.6 | Plus |
CG14983-PA | 163 | CG14983-PA | 12..160 | 6..159 | 257 | 40.8 | Plus |
CG31807-PB | 142 | CG31807-PB | 13..137 | 27..154 | 183 | 35.2 | Plus |