Clone Sequence Records
BO14508.3prime Sequence
431 bp (430 high quality bases) assembled on 2006-05-29
> BO14508.3prime
ATGGTCTAGAAAGCTTGCTCGCTTGAAGCTTAGGCTCTCAGCTGGCGAAC
AAAAGGCTTTAATGTGATCGCAGTCCCGTCTACCCAGTGCCATATCCGAG
TGATAGTCGATCGGATAGACGATGGGCTGGCGATCAATACGCCACAAGGT
CGGCTCAGAAAGGACCTCAACGTCGGTATCCAACTTAACGTCGCACTTGC
CCGCATACGAGGTGAACCTTATCGGCTTGTGGACTCGATTATAGGGGTCT
TTGAAATAATCCCTGTAGTCCTGGCACTCCAAGTAGAACCTATCAACTCC
CCGGACTGCGGCGTAGTCCAACACTTTCAGTCCAGGCTTATCGCAATTGA
AGATGGAAAGGCGGTGTATCCGGCTACTCTTGGACACATTCCACATGTCC
ACCTCTGGAATGAGCATGTCGACTGATAACT
BO14508.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13110-PA | 402 | CG13110-RA | 1..399 | 417..19 | 1895 | 98.9 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:46:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13110-RA | 527 | CG13110-RA | 79..477 | 417..19 | 1935 | 99 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:46:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9350548..9350946 | 417..19 | 1935 | 99 | Minus |
Blast to na_te.dros performed on 2015-02-11 09:46:22 has no hits.
BO14508.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:30:01 Download gff for
BO14508.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13110-PA | 1..402 | 18..417 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:26:39 Download gff for
BO14508.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13110-PA | 1..402 | 18..417 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 04:52:15 Download gff for
BO14508.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13110-RA | 79..483 | 11..417 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:04:36 Download gff for
BO14508.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13110-RA | 79..483 | 11..417 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:04:36 Download gff for
BO14508.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9350548..9350952 | 11..417 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 04:52:15 Download gff for
BO14508.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9350548..9350952 | 11..417 | 98 | | Minus |
BO14508.5prime Sequence
431 bp (430 high quality bases) assembled on 2006-05-29
> BO14508.5prime
GAAGTTATCAGTCGACATGCTCATTCCAGAGGTGGACATGTGGAATGTGT
CCAAGAGTAGCCGGATACACCGCCTTTCCATCTTCAATTGCGATAAGCCT
GGACTGAAAGTGTTGGACTACGCCGCAGTCCGGGGAGTTGATAGGTTCTA
CTTGGAGTGCCAGGACTACAGGGATTATTTCAAAGACCCCTATAATCGAG
TCCACAAGCCGATAAGGTTCACCTCGTATGCGGGCAAGTGCGACGTTAAG
TTGGATACCGACGTTGAGGTCCTTTCTGAGCCGACCTTGTGGCGTATTGA
TCGCCAGCCCATCGTCTATCCGATCGACTATCACTCGGATATGGCACTGG
GTAGACGGGACTGCGATCACATTAAAGCCTTTTGTTCGCCAGCTGAGAGC
CTAAGCTTCAAGCGAGCAAGCTTTCTAGACC
BO14508.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13110-PA | 402 | CG13110-RA | 1..399 | 17..415 | 1895 | 98.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:07:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13110-RA | 527 | CG13110-RA | 79..477 | 17..415 | 1935 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:07:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9350548..9350946 | 17..415 | 1935 | 99 | Plus |
Blast to na_te.dros performed on 2015-02-11 16:07:31 has no hits.
BO14508.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:30:02 Download gff for
BO14508.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13110-PA | 1..402 | 17..416 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:26:41 Download gff for
BO14508.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13110-PA | 1..402 | 17..416 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 13:59:09 Download gff for
BO14508.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13110-RA | 79..483 | 17..423 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:47:31 Download gff for
BO14508.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13110-RA | 79..483 | 17..423 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:47:31 Download gff for
BO14508.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9350548..9350952 | 17..423 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 13:59:09 Download gff for
BO14508.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9350548..9350952 | 17..423 | 98 | | Plus |
BO14508.complete Sequence
433 bp assembled on 2006-10-11
GenBank Submission: FJ633159
> BO14508.complete
GAAGTTATCAGTCGACATGCTCATTCCAGAGGTGGACATGTGGAATGTGT
CCAAGAGTAGCCGGATACACCGCCTTTCCATCTTCAATTGCGATAAGCCT
GGACTGAAAGTGTTGGACTACGCCGCAGTCCGGGGAGTTGATAGGTTCTA
CTTGGAGTGCCAGGACTACAGGGATTATTTCAAAGACCCCTATAATCGAG
TCCACAAGCCGATAAGGTTCACCTCGTATGCGGGCAAGTGCGACGTTAAG
TTGGATACCGACGTTGAGGTCCTTTCTGAGCCGACCTTGTGGCGTATTGA
TCGCCAGCCCATCGTCTATCCGATCGACTATCACTCGGATATGGCACTGG
GTAGACGGGACTGCGATCACATTAAAGCCTTTTGTTCGCCAGCTGAGAGC
CTAAGCTTCAAGCGAGCAAGCTTTCTAGACCAT
BO14508.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:58:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13110-RA | 402 | CG13110-PA | 1..399 | 17..415 | 1935 | 99 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:58:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13110-RA | 527 | CG13110-RA | 79..477 | 17..415 | 1935 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:57:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9350548..9350946 | 17..415 | 1935 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-27 23:57:58 has no hits.
BO14508.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:37:13 Download gff for
BO14508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13110-RA | 1..402 | 17..416 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:58:43 Download gff for
BO14508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13110-RA | 72..476 | 17..423 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:42:32 Download gff for
BO14508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13110-RA | 79..477 | 17..417 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:37:13 Download gff for
BO14508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13110-RA | 72..476 | 17..423 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:11:49 Download gff for
BO14508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13110-RA | 79..477 | 17..417 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:11:49 Download gff for
BO14508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9350548..9350946 | 17..417 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:42:32 Download gff for
BO14508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9350548..9350946 | 17..417 | 98 | | Plus |
BO14508.pep Sequence
Translation from 16 to 433
> BO14508.pep
MLIPEVDMWNVSKSSRIHRLSIFNCDKPGLKVLDYAAVRGVDRFYLECQD
YRDYFKDPYNRVHKPIRFTSYAGKCDVKLDTDVEVLSEPTLWRIDRQPIV
YPIDYHSDMALGRRDCDHIKAFCSPAESLSFKRASFLDH
BO14508.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:12:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13110-PA | 133 | CG13110-PA | 1..133 | 1..133 | 725 | 100 | Plus |
CG31347-PA | 143 | CG31347-PA | 6..117 | 3..113 | 262 | 44.6 | Plus |
CG43796-PA | 127 | CG43796-PA | 4..106 | 11..112 | 234 | 42.7 | Plus |
CG14391-PA | 135 | CG14391-PA | 5..116 | 3..112 | 229 | 42 | Plus |