Clone Sequence Records
BO14510.3prime Sequence
871 bp (808 high quality bases) assembled on 2006-05-29
> BO14510.3prime
ATGGTCTAGAAAGCTTGCAATATCATCCTCGAAGAGGGCGATTATTTGAC
GCCTTTTGGCTTCGTCGTCGGCGTTCAGTTCATTGCCCCTGTGGGCATTG
TGGTTGTGCACCTCCAGTTCGGAGACTGAGTCAAATTCTAAATTGCACTG
CCCGCAGCGGGCTGAGAAAACGGGCGCTGGACCCTGCGAAACTGTGCCAG
GAGAGACAGCGGCCCGTTGCAGCTTCTCGAGGAACGTGGCTCTCTCCCTG
TGCTTGTCCAGCCCGATTCCCAGCGCCGCCTTTCCGCGAATGGGAATGGG
TTTTTTCACCGTCGGCGTGCCCTGGGAATGGCAACTTTCAGAGCGCTCAA
TGGCGTACAGCACGTTGTTCTCCTCCGTGATCGGAGTCGTCGTTCCGCTG
GCACAGTCGAATAGAGATGGTTCCTGCACCGGCCGGGGATCGGGTATATC
TATGGGAATTGGCGGCTCAGCTATCTTCTCACCGTTGGACACCTTCACCT
GATTGAGCTTCTCGGCCAGAAGCGAGTCTATGGAATGTTCCTGCAGCCAG
GCGCAAGTTTTGTGCAGAGCGAATATCATGCGGCGGATGAACTCGTGCGG
CGAGACCATTTTCTGTCGCCTAATCTCGAGCAACTTGGTCACCTCGGTAA
CAAACGTGACGAACTGGTATTCGACGCAGTTGTCCAGATGCGACTGATGC
GAGTCCTCGAACATGAAGCGTTTGGAGCATGCCGGACACTTGCGCTCCTT
CCACATGGGCTCCGGTATGTTCACTTTGATGTCGCGCAGCTGCAGCTGAT
CCTGCTCCATGGGATCGTCCTCCTCGAAGTTGGTCTCGGTGTAGTTATAG
CAGTTCTTGTGCTTGCGCAGC
BO14510.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15435-PA | 1512 | CG15435-RA | 657..1509 | 871..19 | 4265 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:55:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15435-RB | 1948 | CG15435-RB | 906..1758 | 871..19 | 4265 | 100 | Minus |
| CG15435-RA | 1807 | CG15435-RA | 765..1617 | 871..19 | 4265 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:55:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4460704..4461556 | 871..19 | 4265 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 15:55:30 has no hits.
BO14510.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:30:05 Download gff for
BO14510.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-PA | 657..1512 | 18..871 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:26:45 Download gff for
BO14510.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-PA | 657..1512 | 18..871 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:37:17 Download gff for
BO14510.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-RA | 765..1624 | 10..871 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:52:38 Download gff for
BO14510.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-RA | 765..1624 | 10..871 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:52:38 Download gff for
BO14510.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4460704..4461563 | 10..871 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:37:17 Download gff for
BO14510.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4460704..4461563 | 10..871 | 99 | | Minus |
BO14510.5prime Sequence
894 bp (720 high quality bases) assembled on 2006-05-29
> BO14510.5prime
GAAGTTATCAGTCGACATGACGTCGTGGGGCAATATCTGCCGCATCTGCA
GCAGCCCCGCAGACTACGAGATATTCGCCAAGATTCCCACGTATTTGCAC
GGCTCCACAAACGAGTTTCTCAACTGGCAAAAGCCCATAAACGTTCTGCT
GGAGGAGACGACGGGCCTGAAAAACTCCACGGACGACGGACTGCCACGCA
ACATATGTGCGCCGTGCATCTCCTATCTCAAGCATGCCGTCACATTCCGG
GAACAGTGCATCAAGAACGCGCTGAGTCTCAAGCTGGCGGAGCTCTACCA
GCAGAAGAGGGTCAACGTTTCGGATGCGAACAAGATGGACAAGGAGAGCG
CCCTCTTCACGGCGGAGGATCTGAATTATGTGGAGCAGAGGCCAGTGCAT
AATCTTCTGCTAAACAACAGCGCCAACAAACTGGAGTCATCCAAGGACAA
GGTACACAAGCGACTGCTCAATCAGACGACTACCCAGCTAGACGGCAATG
CTGAGCAGAAGATCCAGTACTTAAACGTGCTGTTCAACAAGCAGCAGCCT
CACAACAGCATGCCCAGGCAACCGCGGGATGGCGAACTGCCATCGAGCAG
TGGCCAAAATGACGACGAAGATGACGACTATGCGGTGGCCAGTTCCAGCG
ACGACAACGAGGAGGCGGCCCTGCTGCGCAAGCACAAGAACTGCTATAAC
TACACCGAGACCAACTTCGAGGAGGACGATCCCATGGAGCAGGATCAGCT
GCAGCTGCGCGACATCAAAGTGAACATACCGGAGCCCATGTGGAAGGAGC
GCAAGTGTCCGGCATGCTCCAAACGCTTCATGTTCGAGGACTCGCATCAG
TCGCATCTGGACAACTGCGTCGAATACCAGTTCGTCACGTTTGT
BO14510.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15435-PA | 1512 | CG15435-RA | 1..878 | 17..894 | 4390 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:42:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15435-RB | 1948 | CG15435-RB | 250..1127 | 17..894 | 4390 | 100 | Plus |
| CG15435-RA | 1807 | CG15435-RA | 109..986 | 17..894 | 4390 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:42:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4460204..4460925 | 173..894 | 3610 | 100 | Plus |
| 2L | 23513712 | 2L | 4459978..4460133 | 17..172 | 780 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 12:42:47 has no hits.
BO14510.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:30:06 Download gff for
BO14510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-PA | 1..878 | 17..894 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:26:46 Download gff for
BO14510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-PA | 1..878 | 17..894 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:11:32 Download gff for
BO14510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-RA | 106..986 | 10..894 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:29:27 Download gff for
BO14510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-RA | 106..986 | 10..894 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:29:27 Download gff for
BO14510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4459977..4460133 | 16..172 | 99 | -> | Plus |
| 2L | 4460204..4460925 | 173..894 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:11:32 Download gff for
BO14510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4459977..4460133 | 16..172 | 99 | -> | Plus |
| arm_2L | 4460204..4460925 | 173..894 | 100 | | Plus |
BO14510.complete Sequence
1543 bp assembled on 2006-10-11
GenBank Submission: FJ633160
> BO14510.complete
GAAGTTATCAGTCGACATGACGTCGTGGGGCAATATCTGCCGCATCTGCA
GCAGCCCCGCAGACTACGAGATATTCGCCAAGATTCCCACGTATTTGCAC
GGCTCCACAAACGAGTTTCTCAACTGGCAAAAGCCCATAAACGTTCTGCT
GGAGGAGACGACGGGCCTGAAAAACTCCACGGACGACGGACTGCCACGCA
ACATATGTGCGCCGTGCATCTCCTATCTCAAGCATGCCGTCACATTCCGG
GAACAGTGCATCAAGAACGCGCTGAGTCTCAAGCTGGCGGAGCTCTACCA
GCAGAAGAGGGTCAACGTTTCGGATGCGAACAAGATGGACAAGGAGAGCG
CCCTCTTCACGGCGGAGGATCTGAATTATGTGGAGCAGAGGCCAGTGCAT
AATCTTCTGCTAAACAACAGCGCCAACAAACTGGAGTCATCCAAGGACAA
GGTACACAAGCGACTGCTCAATCAGACGACTACCCAGCTAGACGGCAATG
CTGAGCAGAAGATCCAGTACTTAAACGTGCTGTTCAACAAGCAGCAGCCT
CACAACAGCATGCCCAGGCAACCGCGGGATGGCGAACTGCCATCGAGCAG
TGGCCAAAATGACGACGAAGATGACGACTATGCGGTGGCCAGTTCCAGCG
ACGACAACGAGGAGGCGGCCCTGCTGCGCAAGCACAAGAACTGCTATAAC
TACACCGAGACCAACTTCGAGGAGGACGATCCCATGGAGCAGGATCAGCT
GCAGCTGCGCGACATCAAAGTGAACATACCGGAGCCCATGTGGAAGGAGC
GCAAGTGTCCGGCATGCTCCAAACGCTTCATGTTCGAGGACTCGCATCAG
TCGCATCTGGACAACTGCGTCGAATACCAGTTCGTCACGTTTGTTACCGA
GGTGACCAAGTTGCTCGAGATTAGGCGACAGAAAATGGTCTCGCCGCACG
AGTTCATCCGCCGCATGATATTCGCTCTGCACAAAACTTGCGCCTGGCTG
CAGGAACATTCCATAGACTCGCTTCTGGCCGAGAAGCTCAATCAGGTGAA
GGTGTCCAACGGTGAGAAGATAGCTGAGCCGCCAATTCCCATAGATATAC
CCGATCCCCGGCCGGTGCAGGAACCATCTCTATTCGACTGTGCCAGCGGA
ACGACGACTCCGATCACGGAGGAGAACAACGTGCTGTACGCCATTGAGCG
CTCTGAAAGTTGCCATTCCCAGGGCACGCCGACGGTGAAAAAACCCATTC
CCATTCGCGGAAAGGCGGCGCTGGGAATCGGGCTGGACAAGCACAGGGAG
AGAGCCACGTTCCTCGAGAAGCTGCAACGGGCCGCTGTCTCTCCTGGCAC
AGTTTCGCAGGGTCCAGCGCCCGTTTTCTCAGCCCGCTGCGGGCAGTGCA
ATTTAGAATTTGACTCAGTCTCCGAACTGGAGGTGCACAACCACAATGCC
CACAGGGGCAATGAACTGAACGCCGACGACGAAGCCAAAAGGCGTCAAAT
AATCGCCCTCTTCGAGGATGATATTGCAAGCTTTCTAGACCAT
BO14510.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:41:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15435-RB | 1512 | CG15435-PB | 1..1509 | 17..1525 | 7545 | 100 | Plus |
| CG15435-RA | 1512 | CG15435-PA | 1..1509 | 17..1525 | 7545 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:41:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15435-RB | 1948 | CG15435-RB | 250..1758 | 17..1525 | 7545 | 100 | Plus |
| CG15435-RA | 1807 | CG15435-RA | 109..1617 | 17..1525 | 7545 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:41:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4460204..4461556 | 173..1525 | 6765 | 100 | Plus |
| 2L | 23513712 | 2L | 4459978..4460133 | 17..172 | 780 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:41:42 has no hits.
BO14510.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:35:39 Download gff for
BO14510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-RA | 1..1512 | 17..1526 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:51:20 Download gff for
BO14510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-RA | 141..1659 | 10..1534 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:22:20 Download gff for
BO14510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-RA | 109..1617 | 17..1527 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:35:40 Download gff for
BO14510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-RA | 141..1659 | 10..1534 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:53:47 Download gff for
BO14510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-RA | 109..1617 | 17..1527 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:53:47 Download gff for
BO14510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4459978..4460133 | 17..172 | 100 | -> | Plus |
| 2L | 4460204..4461556 | 173..1527 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:22:20 Download gff for
BO14510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4459978..4460133 | 17..172 | 100 | -> | Plus |
| arm_2L | 4460204..4461556 | 173..1527 | 99 | | Plus |
BO14510.pep Sequence
Translation from 16 to 1543
> BO14510.pep
MTSWGNICRICSSPADYEIFAKIPTYLHGSTNEFLNWQKPINVLLEETTG
LKNSTDDGLPRNICAPCISYLKHAVTFREQCIKNALSLKLAELYQQKRVN
VSDANKMDKESALFTAEDLNYVEQRPVHNLLLNNSANKLESSKDKVHKRL
LNQTTTQLDGNAEQKIQYLNVLFNKQQPHNSMPRQPRDGELPSSSGQNDD
EDDDYAVASSSDDNEEAALLRKHKNCYNYTETNFEEDDPMEQDQLQLRDI
KVNIPEPMWKERKCPACSKRFMFEDSHQSHLDNCVEYQFVTFVTEVTKLL
EIRRQKMVSPHEFIRRMIFALHKTCAWLQEHSIDSLLAEKLNQVKVSNGE
KIAEPPIPIDIPDPRPVQEPSLFDCASGTTTPITEENNVLYAIERSESCH
SQGTPTVKKPIPIRGKAALGIGLDKHRERATFLEKLQRAAVSPGTVSQGP
APVFSARCGQCNLEFDSVSELEVHNHNAHRGNELNADDEAKRRQIIALFE
DDIASFLDH
BO14510.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:57:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15435-PB | 503 | CG15435-PB | 1..503 | 1..503 | 2658 | 100 | Plus |
| CG15435-PA | 503 | CG15435-PA | 1..503 | 1..503 | 2658 | 100 | Plus |
