Clone BO14511 Report

Search the DGRC for BO14511

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:145
Well:11
Vector:pDNR-Dual
Associated Gene/TranscriptCG5458-RA
Protein status:BO14511.pep: validated full length
Sequenced Size:1066

Clone Sequence Records

BO14511.3prime Sequence

834 bp (826 high quality bases) assembled on 2006-05-29

> BO14511.3prime
ATGGTCTAGAAAGCTTGCAGGATCTGGACACTCTGGTTGCTTGAGGATCT
CAATGCAGCATGGATTGGCGTCGATTTTGCACACCTCGCTCTCCGTCTCC
ACCTCGCTGACATCGGTGAGATCGCACTCGCATGGGAAGCACTCCATCTC
GCCGCCCTCCTCGCCCTCGGCCTCTTCACCCTCTCCATACCAACTGATCT
TCTCCTCGCTGCGCATGCTCGGCTCAGTGGAGAGCGAGCAGACGGACAGC
TCGGAATCGGAAATGGCCAGAGGCACTGGCTCCTGCGGCAGCAGCGAAAA
GTCATACACGGCCATCTCCTGGGCGAACCATAGTGTTGGTTCCATTGGCT
CCGCTTCACCCATCTCGTCCTCCAAGCGCTCCTCGGCGTCCTCCATCTCG
TCTTCGTTGCTGATCGCCTTCATGTTGTAACTGGCGGGCAGGAAATAGCC
CAGCAGAAGGTATCGATTGTTGAAGCTAAACACGGCCGGTCCACTCGGGT
ACAGGTTATCCCAAATTCCGTGAAGTATTGTGCACTTGTCCTCATTGCCG
ATATACAGCTCGAAGGGACCCGTTCGCATGTTGCTGTTCCAGGTGGCCTT
CATTCTGACGGACAGGCAGCAGCCATCCTTTCCGCTGTTAAAGTGATAGA
TGCCCACCCCATGACGTTGTCCCTTGAACCAGTCACCCGAATAGTTGTCC
CCATTCACATACTTGTACCGGCCCTTGCCGTGCTTCAAGTTCTTTCGCCA
GTTGCCCTCGTACACGGATCCGTCCGGATAGATGAAGATGCCGCGCCCAC
AACGCTTCCCGCAGCGATACTGTCCGTAGTATCG

BO14511.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG5458-PA 1035 CG5458-RA 217..1032 834..19 4080 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:13:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG16974-RB 5528 CG16974-RB 4593..5408 19..834 4080 100 Plus
CG5458-RA 1262 CG5458-RA 356..1171 834..19 4080 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:13:10
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13183969..13184784 834..19 4080 100 Minus
Blast to na_te.dros performed on 2015-02-10 17:13:14 has no hits.

BO14511.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:30:07 Download gff for BO14511.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5458-PA 217..1035 18..834 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:26:47 Download gff for BO14511.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5458-PA 217..1035 18..834 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 23:02:56 Download gff for BO14511.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16974-RB 4593..5408 19..834 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:43:56 Download gff for BO14511.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5458-RA 356..1171 19..834 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:43:56 Download gff for BO14511.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 13183969..13184784 19..834 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 23:02:56 Download gff for BO14511.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13183969..13184784 19..834 100   Minus

BO14511.5prime Sequence

906 bp (742 high quality bases) assembled on 2006-05-29

> BO14511.5prime
GAAGTTATCAGTCGACATGGCCATGACCGAAATGTCCGAGGAGGATCTGT
CGGCGCCCGAGGAAGAGGAGGATTTGGGACCCAATATAGGCCTCTACATA
GGCGGTCGAAATGCTGCCGGACAGAGACAAGGTAGAGGTTGGGCCATCCT
GCCCAACGGAGATCAGTATGATGGGAACTACAGGAAGGGTCGCCGTCACG
GCATCGGGGTGTACGTGTTCAAGGATGGTTCACGATACTACGGACAGTAT
CGCTGCGGGAAGCGTTGTGGGCGCGGCATCTTCATCTATCCGGACGGATC
CGTGTACGAGGGCAACTGGCGAAAGAACTTGAAGCACGGCAAGGGCCGGT
ACAAGTATGTGAATGGGGACAACTATTCGGGTGACTGGTTCAAGGGACAA
CGTCATGGGGTGGGCATCTATCACTTTAACAGCGGAAAGGATGGCTGCTG
CCTGTCCGTCAGAATGAAGGCCACCTGGAACAGCAACATGCGAACGGGTC
CCTTCGAGCTGTATATCGGCAATGAGGACAAGTGCACAATACTTCACGGA
ATTTGGGATAACCTGTACCCGAGTGGACCGGCCGTGTTTAGCTTCAACAA
TCGATACCTTCTGCTGGGCTATTTCCTGCCCGCCAGTTACAACATGAAGG
CGATCAGCAACGAAGACGAGATGGAGGACGCCGAGGAGCGCTTGGAGGAC
GAGATGGGTGAAGCGGAGCCAATGGAACCAACACTATGGTTCGCCCAGGA
GATGGCCGTGTATGACTTTTCGCTGCTGCCGCAGGAGCCAGTGCCTCTGG
CCATTTCCGATTCCGAGCTGTCCGTCTGCTCGCTCTCCACTGAGCCGAGC
ATGCGCAGCGAGGAGAAGATCAGTTGGTATGGAAAGGGTGAAGAGGCCGA
GGGCGA

BO14511.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG5458-PA 1035 CG5458-RA 1..890 17..906 4425 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:01:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG5458-RA 1262 CG5458-RA 139..1029 16..906 4440 99.9 Plus
CG16974-RB 5528 CG16974-RB 4735..5528 906..113 3955 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:01:15
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13183828..13184642 92..906 4060 99.9 Plus
2L 23513712 2L 13183588..13183663 16..91 380 100 Plus
Blast to na_te.dros performed on 2015-02-12 01:01:18 has no hits.

BO14511.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:30:08 Download gff for BO14511.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5458-PA 1..889 17..905 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:26:48 Download gff for BO14511.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5458-PA 1..889 17..905 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:34:57 Download gff for BO14511.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5458-RA 131..1028 7..905 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:52:21 Download gff for BO14511.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5458-RA 131..1028 7..905 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 04:52:21 Download gff for BO14511.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 13183580..13183663 7..91 96 -> Plus
2L 13183828..13184641 92..905 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:34:57 Download gff for BO14511.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13183580..13183663 7..91 96 -> Plus
arm_2L 13183828..13184641 92..905 99   Plus

BO14511.complete Sequence

1066 bp assembled on 2006-10-11

GenBank Submission: FJ633161

> BO14511.complete
GAAGTTATCAGTCGACATGGCCATGACCGAAATGTCCGAGGAGGATCTGT
CGGCGCCCGAGGAAGAGGAGGATTTGGGACCCAATATAGGCCTCTACATA
GGCGGTCGAAATGCTGCCGGACAGAGACAAGGTAGAGGTTGGGCCATCCT
GCCCAACGGAGATCAGTATGATGGGAACTACAGGAAGGGTCGCCGTCACG
GCATCGGGGTGTACGTGTTCAAGGATGGTTCACGATACTACGGACAGTAT
CGCTGCGGGAAGCGTTGTGGGCGCGGCATCTTCATCTATCCGGACGGATC
CGTGTACGAGGGCAACTGGCGAAAGAACTTGAAGCACGGCAAGGGCCGGT
ACAAGTATGTGAATGGGGACAACTATTCGGGTGACTGGTTCAAGGGACAA
CGTCATGGGGTGGGCATCTATCACTTTAACAGCGGAAAGGATGGCTGCTG
CCTGTCCGTCAGAATGAAGGCCACCTGGAACAGCAACATGCGAACGGGTC
CCTTCGAGCTGTATATCGGCAATGAGGACAAGTGCACAATACTTCACGGA
ATTTGGGATAACCTGTACCCGAGTGGACCGGCCGTGTTTAGCTTCAACAA
TCGATACCTTCTGCTGGGCTATTTCCTGCCCGCCAGTTACAACATGAAGG
CGATCAGCAACGAAGACGAGATGGAGGACGCCGAGGAGCGCTTGGAGGAC
GAGATGGGTGAAGCGGAGCCAATGGAACCAACACTATGGTTCGCCCAGGA
GATGGCCGTGTATGACTTTTCGCTGCTGCCGCAGGAGCCAGTGCCTCTGG
CCATTTCCGATTCCGAGCTGTCCGTCTGCTCGCTCTCCACTGAGCCGAGC
ATGCGCAGCGAGGAGAAGATCAGTTGGTATGGAGAGGGTGAAGAGGCCGA
GGGCGAGGAGGGCGGCGAGATGGAGTGCTTCCCATGCGAGTGCGATCTCA
CCGATGTCAGCGAGGTGGAGACGGAGAGCGAGGTGTGCAAAATCGACGCC
AATCCATGCTGCATTGAGATCCTCAAGCAACCAGAGTGTCCAGATCCTGC
AAGCTTTCTAGACCAT

BO14511.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:13:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG5458-RA 1035 CG5458-PA 1..1032 17..1048 5160 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:13:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG5458-RA 1262 CG5458-RA 139..1171 16..1048 5165 100 Plus
CG16974-RB 5528 CG16974-RB 4593..5528 1048..113 4680 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:13:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13183828..13184784 92..1048 4785 100 Plus
2L 23513712 2L 13183588..13183663 16..91 380 100 Plus
Blast to na_te.dros performed on 2014-11-27 14:13:28 has no hits.

BO14511.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:35:41 Download gff for BO14511.complete
Subject Subject Range Query Range Percent Splice Strand
CG5458-RA 1..1035 17..1049 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:51:21 Download gff for BO14511.complete
Subject Subject Range Query Range Percent Splice Strand
CG5458-RA 131..1171 7..1048 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:37:02 Download gff for BO14511.complete
Subject Subject Range Query Range Percent Splice Strand
CG5458-RA 140..1171 17..1050 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:35:41 Download gff for BO14511.complete
Subject Subject Range Query Range Percent Splice Strand
CG5458-RA 131..1171 7..1048 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:06:19 Download gff for BO14511.complete
Subject Subject Range Query Range Percent Splice Strand
CG5458-RA 140..1171 17..1050 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:06:19 Download gff for BO14511.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13183589..13183663 17..91 100 -> Plus
2L 13183828..13184784 92..1050 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:37:02 Download gff for BO14511.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13183589..13183663 17..91 100 -> Plus
arm_2L 13183828..13184784 92..1050 99   Plus

BO14511.pep Sequence

Translation from 16 to 1066

> BO14511.pep
MAMTEMSEEDLSAPEEEEDLGPNIGLYIGGRNAAGQRQGRGWAILPNGDQ
YDGNYRKGRRHGIGVYVFKDGSRYYGQYRCGKRCGRGIFIYPDGSVYEGN
WRKNLKHGKGRYKYVNGDNYSGDWFKGQRHGVGIYHFNSGKDGCCLSVRM
KATWNSNMRTGPFELYIGNEDKCTILHGIWDNLYPSGPAVFSFNNRYLLL
GYFLPASYNMKAISNEDEMEDAEERLEDEMGEAEPMEPTLWFAQEMAVYD
FSLLPQEPVPLAISDSELSVCSLSTEPSMRSEEKISWYGEGEEAEGEEGG
EMECFPCECDLTDVSEVETESEVCKIDANPCCIEILKQPECPDPASFLDH

BO14511.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:57:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG5458-PA 344 CG5458-PA 1..344 1..344 1905 100 Plus
CG30429-PA 305 CG30429-PA 77..200 36..160 183 32.1 Plus
CG14490-PA 197 CG14490-PA 24..171 30..180 182 32.1 Plus
CG30429-PA 305 CG30429-PA 69..162 51..140 174 36.2 Plus
CG14490-PA 197 CG14490-PA 42..164 25..141 170 34.1 Plus
rtp-PA 198 CG10233-PA 47..157 33..143 159 33 Plus
CG30429-PA 305 CG30429-PA 89..193 21..124 156 31.4 Plus
rtp-PA 198 CG10233-PA 64..147 27..110 155 39.3 Plus