Clone BO14516 Report

Search the DGRC for BO14516

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:145
Well:16
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO14516.pep: validated full length
Sequenced Size:1429

Clone Sequence Records

BO14516.3prime Sequence

912 bp (785 high quality bases) assembled on 2006-05-29

> BO14516.3prime
ATGGTCTAGAAAGCTTGCTTGTTTTTTTTCATGAATACCGCATCCGAAAC
AAGTAAATGGCTGACGCAGGGCCAGCATCCGATCGCGATTCATTCGAAAG
ATATGATCCTGCATCAACTGGTCAGTGTGGGAGCGTATTTGATTACGATC
CTCGAGGACATGACGCAACTGAATCAAAGCGTTATCACCATCGATGCCGC
ACAATTCCTCCTCGTCGGCGTGCAGACTCATATCGGCGATGCCCAAACGG
GCCATGGCCATGGCAATATTATCAATGTCGCTATCAACATGAAAGCACGA
TAGGTATTTCTGATCAGCCTCAGTTGAGCATTTATCCAACTCCTGCGACT
GATCGCCCACTGTACACATTTCATTCCTTTCTCGAGTTTCTGTGGCTTCT
TCAGCAGTGGCCGGTTTCTTAACCACCCTCACAATGCATCCATCATCAAA
GGCCTCGTCGTAGTTTTGCACACTGTATGCCCCCTTTGGTGACTTCGGCT
CCTTCGTTTCCATTACCATAAAGCCCTTGGTGATGGAAATATCAAATTTA
GGTTTGACACCTGCTAGCGTTGCCTTTGACTCAGCATCATCGCTGGCTTT
CTTTTCGATCTCAAATTGAATTTTCTTTATCATATCGACGGCCGGCTCTT
CGCGACAAATCTTGCCAACGAATAGCGGTGGTGTGATGGAACCATTATAC
TGTGGCTGTGGTGGACCGAAACGTCCGATGTAGTCCATGAACCACAGTTC
GGATAGAGTTCCCGGCTTGATGACGCAACCGGCTTCGAATCCTTTGGGCA
TGAAACGTTTGGGCAGAAAAATTGGTCGATTGACGCCCTCACAAATGGGA
AAGACTCCGATGGGCAGCTCGAACTTGGGGCACTCCGCATCATCGCCCAT
GGTGGCGAATGC

BO14516.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG15333-PA 1398 CG15333-RA 502..1395 912..19 4470 100 Minus
CG15332-PB 1674 CG15332-RB 748..923 912..737 380 88.6 Minus
CG15332-PA 1716 CG15332-RA 790..965 912..737 380 88.6 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:01:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG15333-RA 1823 CG15333-RA 814..1707 912..19 4470 100 Minus
CG15332-RA 2003 CG15332-RA 985..1160 912..737 580 88.6 Minus
CG15332-RA 2003 CG15332-RA 1374..1482 532..424 230 80.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 13:01:07
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8019639..8020532 19..912 4470 100 Plus
X 23542271 X 7954695..7954870 737..912 580 88.6 Plus
X 23542271 X 7954373..7954481 424..532 230 80.7 Plus
Blast to na_te.dros performed on 2015-02-08 13:01:11 has no hits.

BO14516.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:30:17 Download gff for BO14516.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15333-PA 502..1398 18..912 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:27:01 Download gff for BO14516.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15333-PA 502..1398 18..912 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:48:23 Download gff for BO14516.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15333-RA 814..1696 30..912 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:51:55 Download gff for BO14516.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15333-RA 814..1696 30..912 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:51:55 Download gff for BO14516.3prime
Subject Subject Range Query Range Percent Splice Strand
X 8019650..8020532 30..912 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:48:23 Download gff for BO14516.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 7913683..7914565 30..912 100   Plus

BO14516.5prime Sequence

931 bp (778 high quality bases) assembled on 2006-05-29

> BO14516.5prime
GAAGTTATCAGTCGACATGGACAAGATTGTCTTTCTGCCAACGTCCATGT
TGCCCATGGGCTTCGAAGCTGGCGGTGTTTTTGGGCCGGGTATCCTTACG
CGTCGTTCCTATCCCATTGACTTGAAGGCCGCGGGTCACAAGGGTCAAAC
GCCGCCGCTGTTTGTCGGTTTGCGCATGGAAGTCCAACCGCCGACAAGGG
TCGAGAGTCTCCTAAAAAAAGACGGTGAGTCCCAACCAATTCAGGACACA
TTGATGAATTGGTTGCATGCCAGCAATGATCTTATAAATGGGGCACAGCC
AAAAGGACAAGAGCTTCGTGATGAATTTTCGCTATCGATGGTCTTCAATT
TGCCAATACCACCGAGTCCACCATCGCCCTATTCATATGGCCGTATCCCG
TTGCAGTGCAACATTTATACGCCGGATCTGTCCAATGTTCTGTTGCTTAT
GTCGCACCAACGCGATCTTACGGTGGCGATACTGTCCACCGTTAACAATC
CGCATGTTCCATCTGTGGCATTCGCCACCATGGGCGATGATGCGGAGTGC
CCCAAGTTCGAGCTGCCCATCGGAGTCTTTCCCATTTGTGAGGGCGTCAA
TCGACCAATTTTTCTGCCCAAACGTTTCATGCCCAAAGGATTCGAAGCCG
GTTGCGTCATCAAGCCGGGAACTCTATCCGAACTGTGGTTCATGGACTAC
ATCGGACGTTTCGGTCCACCACAGCCACAGTATAATGGTTCCATCACACC
ACCGCTATTCGTTGGCAAGATTTGTCGCGAAGAGCCGGCCGTCGATATGA
TAAAAGAAATTCAATTTGAGATCGAAAAGAAAGCCAGCGATGATGCTGAG
TCAAAGGCAACGCTAGCAGGTGTCAAACCTAAATTTGATATTTCCATCAC
CAAAGGCTTTATGGTAATGGAAACAAAGGAA

BO14516.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG15333-PA 1398 CG15333-RA 1..914 17..930 4470 99.5 Plus
CG15332-PA 1716 CG15332-RA 754..965 482..693 560 90.5 Plus
CG15332-PB 1674 CG15332-RB 712..923 482..693 560 90.5 Plus
CG15332-PA 1716 CG15332-RA 319..363 47..91 150 93.3 Plus
CG15332-PB 1674 CG15332-RB 277..321 47..91 150 93.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 02:09:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG15333-RA 1823 CG15333-RA 313..1226 17..930 4510 99.6 Plus
CG15332-RA 2003 CG15332-RA 833..1160 366..693 905 85.4 Plus
CG15332-RA 2003 CG15332-RA 490..643 23..176 265 78.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 02:09:29
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8020120..8021033 930..17 4510 99.6 Minus
X 23542271 X 7954695..7955022 693..366 905 85.1 Minus
X 23542271 X 7955212..7955365 176..23 260 77.9 Minus
Blast to na_te.dros performed 2015-02-04 02:09:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dm88 4558 Dm88 DM88 4558bp 702..766 786..848 130 70.8 Plus

BO14516.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:30:18 Download gff for BO14516.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15333-PA 1..913 17..929 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:27:02 Download gff for BO14516.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15333-PA 1..913 17..929 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 20:43:07 Download gff for BO14516.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15333-RA 309..1226 12..931 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:20:22 Download gff for BO14516.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15333-RA 309..1226 12..931 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:20:22 Download gff for BO14516.5prime
Subject Subject Range Query Range Percent Splice Strand
X 8020119..8021037 12..931 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 20:43:07 Download gff for BO14516.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 7914152..7915070 12..931 99   Minus

BO14516.complete Sequence

1429 bp assembled on 2006-10-11

GenBank Submission: FJ633164

> BO14516.complete
GAAGTTATCAGTCGACATGGACAAGATTGTCTTTCTGCCAACGTCCATGT
TGCCCATGGGCTTCGAAGCTGGCGGTGTTTTTGGGCCGGGTATCCTTACG
CGTCGTTCCTATCCCATTGACTTGAAGGCCGCGGGTCACAAGGGTCAAAC
GCCGCCGCTGTTTGTCGGTTTGCGCATGGAAGTCCAACCGCCGACAAGGG
TCGAGAGTCTCCTAAAAAAAGACGGTGAGTCCCAACCAATTCAGGACACA
TTGATGAATTGGTTGCATGCCAGCAATGATCTTATAAATGGGGCACAGCC
AAAAGGACAAGAGCTTCGTGATGAATTTTCGCTATCGATGGTCTTCAATT
TGCCAATACCACCGAGTCCACCATCGCCCTATTCATATGGCCGTATCCCG
TTGCAGTGCAACATTTATACGCCGGATCTGTCCAATGTTCTGTTGCTTAT
GTCGCACCAACGCGATCTTACGGTGGCGATACTGTCCACCGTTAACAATC
CGCATGTTCCATCTGTGGCATTCGCCACCATGGGCGATGATGCGGAGTGC
CCCAAGTTCGAGCTGCCCATCGGAGTCTTTCCCATTTGTGAGGGCGTCAA
TCGACCAATTTTTCTGCCCAAACGTTTCATGCCCAAAGGATTCGAAGCCG
GTTGCGTCATCAAGCCGGGAACTCTATCCGAACTGTGGTTCATGGACTAC
ATCGGACGTTTCGGTCCACCACAGCCACAGTATAATGGTTCCATCACACC
ACCGCTATTCGTTGGCAAGATTTGTCGCGAAGAGCCGGCCGTCGATATGA
TAAAGAAAATTCAATTTGAGATCGAAAAGAAAGCCAGCGATGATGCTGAG
TCAAAGGCAACGCTAGCAGGTGTCAAACCTAAATTTGATATTTCCATCAC
CAAGGGCTTTATGGTAATGGAAACGAAGGAGCCGAAGTCACCAAAGGGGG
CATACAGTGTGCAAAACTACGACGAGGCCTTTGATGATGGATGCATTGTG
AGGGTGGTTAAGAAACCGGCCACTGCTGAAGAAGCCACAGAAACTCGAGA
AAGGAATGAAATGTGTACAGTGGGCGATCAGTCGCAGGAGTTGGATAAAT
GCTCAACTGAGGCTGATCAGAAATACCTATCGTGCTTTCATGTTGATAGC
GACATTGATAATATTGCCATGGCCATGGCCCGTTTGGGCATCGCCGATAT
GAGTCTGCACGCCGACGAGGAGGAATTGTGCGGCATCGATGGTGATAACG
CTTTGATTCAGTTGCGTCATGTCCTCGAGGATCGTAATCAAATACGCTCC
CACACTGACCAGTTGATGCAGGATCATATCTTTCGAATGAATCGCGATCG
GATGCTGGCCCTGCGTCAGCCATTTACTTGTTTCGGATGCGGTATTCATG
AAAAAAAACAAGCAAGCTTTCTAGACCAT

BO14516.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:29:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG15333-RA 1629 CG15333-PA 232..1626 17..1411 6975 100 Plus
CG15332-RA 1716 CG15332-PA 638..965 366..693 905 85.1 Plus
CG15332-RA 1716 CG15332-PA 295..448 23..176 260 77.9 Plus
CG15332-RA 1716 CG15332-PA 1179..1287 898..1006 230 80.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:29:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG15333-RA 1823 CG15333-RA 313..1707 17..1411 6975 100 Plus
CG15332-RA 2003 CG15332-RA 833..1160 366..693 905 85.1 Plus
CG15332-RA 2003 CG15332-RA 490..643 23..176 260 77.9 Plus
CG15332-RA 2003 CG15332-RA 1374..1482 898..1006 230 80.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:29:19
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8019639..8021033 1411..17 6975 100 Minus
X 23542271 X 7954695..7955022 693..366 905 85.1 Minus
X 23542271 X 7955212..7955365 176..23 260 77.9 Minus
X 23542271 X 7954373..7954481 1006..898 230 80.7 Minus
Blast to na_te.dros performed on 2014-11-27 20:29:20 has no hits.

BO14516.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:35:07 Download gff for BO14516.complete
Subject Subject Range Query Range Percent Splice Strand
CG15333-RA 228..1629 12..1412 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:51:03 Download gff for BO14516.complete
Subject Subject Range Query Range Percent Splice Strand
CG15333-RA 228..1615 12..1400 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:08:20 Download gff for BO14516.complete
Subject Subject Range Query Range Percent Splice Strand
CG15333-RA 313..1696 17..1400 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:35:07 Download gff for BO14516.complete
Subject Subject Range Query Range Percent Splice Strand
CG15333-RA 228..1615 12..1400 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:22:19 Download gff for BO14516.complete
Subject Subject Range Query Range Percent Splice Strand
CG15333-RA 313..1696 17..1400 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:22:19 Download gff for BO14516.complete
Subject Subject Range Query Range Percent Splice Strand
X 8019650..8021033 17..1400 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:08:20 Download gff for BO14516.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 7913683..7915066 17..1400 100   Minus

BO14516.pep Sequence

Translation from 16 to 1429

> BO14516.pep
MDKIVFLPTSMLPMGFEAGGVFGPGILTRRSYPIDLKAAGHKGQTPPLFV
GLRMEVQPPTRVESLLKKDGESQPIQDTLMNWLHASNDLINGAQPKGQEL
RDEFSLSMVFNLPIPPSPPSPYSYGRIPLQCNIYTPDLSNVLLLMSHQRD
LTVAILSTVNNPHVPSVAFATMGDDAECPKFELPIGVFPICEGVNRPIFL
PKRFMPKGFEAGCVIKPGTLSELWFMDYIGRFGPPQPQYNGSITPPLFVG
KICREEPAVDMIKKIQFEIEKKASDDAESKATLAGVKPKFDISITKGFMV
METKEPKSPKGAYSVQNYDEAFDDGCIVRVVKKPATAEEATETRERNEMC
TVGDQSQELDKCSTEADQKYLSCFHVDSDIDNIAMAMARLGIADMSLHAD
EEELCGIDGDNALIQLRHVLEDRNQIRSHTDQLMQDHIFRMNRDRMLALR
QPFTCFGCGIHEKKQASFLDH

BO14516.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:58:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG15333-PA 542 CG15333-PA 78..542 1..465 2464 100 Plus
CG15332-PA 571 CG15332-PA 97..570 1..461 1167 51.1 Plus