Clone BO14520 Report

Search the DGRC for BO14520

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:145
Well:20
Vector:pDNR-Dual
Associated Gene/TranscriptCG14262-RA
Protein status:BO14520.pep: validated full length
Sequenced Size:970

Clone Sequence Records

BO14520.3prime Sequence

861 bp (764 high quality bases) assembled on 2006-05-29

> BO14520.3prime
ATGGTCTAGAAAGCTTGCGTTTTGATTGATGAATCCCTCGGCGTCCAGAA
GAACATTGGGGAAATACTTGATAATTTTGGTGAAGTGCGGGAATTTTTGC
GTGTTGGCGAATGTAATCTCATTGATCTCCTGATACTGCTTTAAAATCGT
GATGAGTTCATCGGGAGGCACTGCATCCGCCACCAGCCAGTGCTGGATGG
CGTAGTTTAGAGCATAGACCGGGAGTTTCATTAAACTGGGTTCGTGGATC
AATGATGCGCCTTCCTCTATGATTTTCTCGATGCAAACGCGCTCCACATC
GATGATGTTATGCCGGAATGCTAGGTCGAAGGCAGGAAAGATGCCATCCA
GAGGCAATTCCTGCTCCTTTAGTTTCTCAGCAAAGGAGCGAAGGAGCTCC
GGCATGTTGTACGCGCAGGACAGGATGAACATATCCCCCACCAGCTTCAG
CTGGACCAGCGGCGAGGTCACCTCGAAGGTGTATATGAACTCCAGGAAGA
TCTCCACGCTCTCGGGCGAAACCCCATTGATCTGGAGTACGCCGTTCCAG
TCCTTGTTCTGGTACACGTCCTGCTCCAGTTTGTCGGAGGCGGTGGCCAG
GAAGATCCGATGGCAGCCAAACTTCTTGTAGCACACACTGACCGCCGGCT
CATCGGATTGGGGGCAGTTGCTCAGGACGTGCACCTGGCAATCGGCATCG
GCTCCACTGCGAAAGTATTCCAGTCTGCGGTTTCTACTCGTAGCGCGTTT
GGACCCATCACTCGGAGAACCCAATGGTAAATTCTCCTCAACATCCGATG
CAGCTGTGGTTCTGGGCACAACGAGTCCCGGCCTCAAGTTCTGGATCCCT
CCCTGGTCGTT

BO14520.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG14262-PA 939 CG14262-RA 94..936 861..19 4140 99.6 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:07:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG14262-RA 1004 CG14262-RA 118..960 861..19 4170 99.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:07:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27264729..27265313 277..861 2880 99.5 Plus
3R 32079331 3R 27264418..27264677 19..278 1300 100 Plus
Blast to na_te.dros performed on 2015-02-03 06:07:17 has no hits.

BO14520.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:30:24 Download gff for BO14520.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14262-PA 94..939 18..861 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:27:12 Download gff for BO14520.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14262-PA 94..939 18..861 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:20:40 Download gff for BO14520.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14262-RA 118..960 19..861 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 09:36:14 Download gff for BO14520.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14262-RA 118..960 19..861 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 09:36:14 Download gff for BO14520.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 27264418..27264675 19..276 100 <- Plus
3R 27264729..27265313 277..861 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:20:40 Download gff for BO14520.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 23090140..23090397 19..276 100 <- Plus
arm_3R 23090451..23091035 277..861 99   Plus

BO14520.5prime Sequence

883 bp (821 high quality bases) assembled on 2006-05-29

> BO14520.5prime
GAAGTTATCAGTCGACATGTCAGACTCTGAGAAGGAGGCCGCCGGCAAAG
CCCACCTGGGAAGCAACAATCGGTGGTCCGACCTGGAGGAGGAGGAGGAG
GGTGAGGCGAACGACCAGGGAGGGATCCAGAACTTGAGGCCGGAACTCGT
TGTGCCCAGAACCACAGCTGCATCGGATGTTGAGGAGAATTTACCATTGG
GTTCTCCGAGTGATGGGTCCAAACGCGCTACGAGTAGAAACCGCAGACTG
GAATACTTTCGCAGTGGAGCCGATGCCGATTGCCAGGTGCACGTCCTGAG
CAACTGCCCCCAATCCGATGAGCCGGCGGTCAGTGTGTGCTACAAGAAGT
TTGGCTGCCATCGGATCTTCCTGGCCACCGCCTCCGACAAACTGGAGCAG
GACGTGTACCAGAACAAGGACTGGAACGGCGTACTCCAGATCAATGGGGT
TTCGCCCGAGAGCGTGGAGATCTTCCTGGAGTTCATATACACCTTCGAGG
TGACCTCGCCGCTGGTCCAGCTGAAGCTGGTGGGGGATATGTTCATCCTG
TCCTGCGCGTACAACATGCCGGAGCTCCTTCGCTCCTTTGCTGAGAAACT
AAAGGAGCAGGAATTGCCTCTGGATGGCATCTTTCCTGCCTTCGACCTAG
CATTCCGGCATAACATCATCGATGTGGAGCGCGTTTGCATCGAGAAAATC
ATAGAGGAAGGCGCATCATTGATCCACGAACCCAGTTTAATGAAACTCCC
GGTCTATGCTCTAAACTACGCCATCCAGCACTGGCTGGTGGCGGATGCAG
TGCCTCCCGATGAACTCATCACGATTTTAAAGCAGTATCAGGAGATCAAT
GAAATTACATTCGCCAACACGCAAAAATTCCCG

BO14520.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG14262-PA 939 CG14262-RA 1..867 17..883 4260 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:04:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG14262-RA 1004 CG14262-RA 25..891 17..883 4290 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 11:04:32
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27264729..27265406 694..17 3360 99.7 Minus
3R 32079331 3R 27264487..27264677 883..693 940 99.5 Minus
Blast to na_te.dros performed on 2015-02-09 11:04:36 has no hits.

BO14520.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:30:25 Download gff for BO14520.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14262-PA 1..867 17..883 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:27:13 Download gff for BO14520.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14262-PA 1..867 17..883 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 16:40:56 Download gff for BO14520.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14262-RA 20..891 9..883 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:42:03 Download gff for BO14520.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14262-RA 20..891 9..883 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 11:42:03 Download gff for BO14520.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 27264487..27264675 695..883 99 <- Minus
3R 27264729..27265411 9..694 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 16:40:56 Download gff for BO14520.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 23090209..23090397 695..883 99 <- Minus
arm_3R 23090451..23091133 9..694 99   Minus

BO14520.complete Sequence

970 bp assembled on 2006-10-11

GenBank Submission: FJ633166

> BO14520.complete
GAAGTTATCAGTCGACATGTCAGACTCTGAGAAGGAGGCCGCCGGCAAAG
CCCACCTGGGAAGCAACAATCGGTGGTCCGACCTGGAGGAGGAGGAGGAG
GGTGAGGCGAACGACCAGGGAGGGATCCAGAACTTGAGGCCGGAACTCGT
TGTGCCCAGAACCACAGCTGCATCGGATGTTGAGGAGAATTTACCATTGG
GTTCTCCGAGTGATGGGTCCAAACGCGCTACGAGTAGAAACCGCAGACTG
GAATACTTTCGCAGTGGAGCCGATGCCGATTGCCAGGTGCACGTCCTGAG
CAACTGCCCCCAATCCGATGAGCCGGCGGTCAGTGTGTGCTACAAGAAGT
TTGGCTGCCATCGGATCTTCCTGGCCACCGCCTCCGACAAACTGGAGCAG
GACGTGTACCAGAACAAGGACTGGAACGGCGTACTCCAGATCAATGGGGT
TTCGCCCGAGAGCGTGGAGATCTTCCTGGAGTTCATATACACCTTCGAGG
TGACCTCGCCGCTGGTCCAGCTGAAGCTGGTGGGGGATATGTTCATCCTG
TCCTGCGCGTACAACATGCCGGAGCTCCTTCGCTCCTTTGCTGAGAAACT
AAAGGAGCAGGAATTGCCTCTGGATGGCATCTTTCCTGCCTTCGACCTAG
CATTCCGGCATAACATCATCGATGTGGAGCGCGTTTGCATCGAGAAAATC
ATAGAGGAAGGCGCATCATTGATCCACGAACCCAGTTTAATGAAACTCCC
GGTCTATGCTCTAAACTACGCCATCCAGCACTGGCTGGTGGCGGATGCAG
TGCCTCCCGATGAACTCATCACGATTTTAAAGCAGTATCAGGAGATCAAT
GAGATTACATTCGCCAACACGCAAAAATTCCCGCACTTCACCAAAATTAT
CAAGTATTTCCCCAATGTTCTTCTGGACGCCGAGGGATTCATCAATCAAA
ACGCAAGCTTTCTAGACCAT

BO14520.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:28:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG14262-RA 939 CG14262-PA 1..936 17..952 4650 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:28:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG14262-RA 1004 CG14262-RA 25..960 17..952 4650 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:28:01
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27264729..27265406 694..17 3360 99.7 Minus
3R 32079331 3R 27264418..27264677 952..693 1300 100 Minus
Blast to na_te.dros performed on 2014-11-27 20:28:02 has no hits.

BO14520.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:35:16 Download gff for BO14520.complete
Subject Subject Range Query Range Percent Splice Strand
CG14262-RA 1..939 17..953 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:51:07 Download gff for BO14520.complete
Subject Subject Range Query Range Percent Splice Strand
CG14262-RA 20..960 9..952 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:10:26 Download gff for BO14520.complete
Subject Subject Range Query Range Percent Splice Strand
CG14262-RA 25..960 17..954 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:35:17 Download gff for BO14520.complete
Subject Subject Range Query Range Percent Splice Strand
CG14262-RA 20..960 9..952 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:21:59 Download gff for BO14520.complete
Subject Subject Range Query Range Percent Splice Strand
CG14262-RA 25..960 17..954 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:21:59 Download gff for BO14520.complete
Subject Subject Range Query Range Percent Splice Strand
3R 27264416..27264675 695..954 99 <- Minus
3R 27264729..27265406 17..694 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:10:26 Download gff for BO14520.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 23090138..23090397 695..954 99 <- Minus
arm_3R 23090451..23091128 17..694 99   Minus

BO14520.pep Sequence

Translation from 16 to 970

> BO14520.pep
MSDSEKEAAGKAHLGSNNRWSDLEEEEEGEANDQGGIQNLRPELVVPRTT
AASDVEENLPLGSPSDGSKRATSRNRRLEYFRSGADADCQVHVLSNCPQS
DEPAVSVCYKKFGCHRIFLATASDKLEQDVYQNKDWNGVLQINGVSPESV
EIFLEFIYTFEVTSPLVQLKLVGDMFILSCAYNMPELLRSFAEKLKEQEL
PLDGIFPAFDLAFRHNIIDVERVCIEKIIEEGASLIHEPSLMKLPVYALN
YAIQHWLVADAVPPDELITILKQYQEINEITFANTQKFPHFTKIIKYFPN
VLLDAEGFINQNASFLDH

BO14520.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:58:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG14262-PA 312 CG14262-PA 1..312 1..312 1626 100 Plus
CG14260-PA 249 CG14260-PA 6..237 76..309 262 29.6 Plus
CG14260-PB 166 CG14260-PB 6..144 76..216 178 31.5 Plus