Clone BO14524 Report

Search the DGRC for BO14524

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:145
Well:24
Vector:pDNR-Dual
Associated Gene/TranscriptCG14420-RA
Protein status:BO14524.pep: validated full length
Sequenced Size:913

Clone Sequence Records

BO14524.3prime Sequence

765 bp (764 high quality bases) assembled on 2006-05-29

> BO14524.3prime
ATGGTCTAGAAAGCTTGCGTTGCGACGTCCGCCACGACGACGACGGCGCA
TGAGGCGCACGAGCCGGCGACGCTGCTGCTGGCGGTGTCTGCGCTGGCGC
TGCTGCTGCTGGCGGCGACGACGGTTCATGTTGTTCCTCCTCTGGCGCTG
GCGCTGGGCCTTGGAACGGTTCCTGTTGCGGCGCTGGCGCTGTGAGACGC
GCTTACGGCTCTGTTGGCGCTGGCGGCGCAAGCGTTGCTGGCTTCGCTTC
TCGGCGGCCCTCTGGCGGCGAAGGAGGGACCTGATCCGCTGGTTGTGCTC
ACGCTGGAGGCGCTGGATTCGGCGACGGTTGCGCTGTTCCTGCTGGAACT
GGCGCCACTGGAGTTCCGAGGGGCGGACCAACGAGCCGGACTCTGAGGAC
TGCTGCACGGCATTGCTATTGCCACCGGCGGAAGGAGCGGCCACAAAGTA
GCTCTCCTCATCGTCGTCATCATCTTCGTCCTCCAGGCTGTCGTCACCTT
CGTCTTCTTCATCTTCAAACGCCCTGGGCATCTCCTCATCATCTTCCTCA
ACATCGTCTTGAATTGCGGGGAAGGCACGACCGGTGGTGGTGTCGGAGGT
TGTGGGCGTGGTGGTGCTCGTCGAGGTGCCAGTGGACGTTGTTGGTGCAG
TCGGCGTGGTCGTCTCCGTAGTGGAGGTGGGCGTGGTGGTGGTAGTGGGG
GCAACCGTGGTCGTCGTGGTGGTGCCCTTCAGCGAGGTCAGCTTGTTGGC
AATCGACGATGTGAA

BO14524.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG14420-PA 882 CG14420-RA 133..879 765..19 3535 98.9 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 18:49:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG14420-RA 1570 CG14420-RA 760..1506 765..19 3615 98.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:49:47
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2939717..2940463 765..19 3615 98.9 Minus
Blast to na_te.dros performed 2015-01-30 18:49:50
Subject Length Description Subject Range Query Range Score Percent Strand
G-element 4346 G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). 567..596 490..461 114 86.7 Minus
Dsim\ninja 6644 Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). 4768..4814 543..500 111 74.5 Minus
aurora-element 4263 aurora-element DMAURA 4263bp Derived from AB022762 (d1268008) (Rel. 59, Last updated, Version 1). 2637..2683 543..500 111 74.5 Minus

BO14524.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:30:33 Download gff for BO14524.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14420-PA 135..882 15..763 98   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:27:22 Download gff for BO14524.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14420-PA 135..882 15..763 98   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 19:02:35 Download gff for BO14524.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14420-RA 760..1510 14..765 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:15:22 Download gff for BO14524.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14420-RA 760..1510 14..765 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:15:22 Download gff for BO14524.3prime
Subject Subject Range Query Range Percent Splice Strand
X 2939717..2940467 14..765 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 19:02:35 Download gff for BO14524.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2833750..2834500 14..765 98   Minus

BO14524.5prime Sequence

771 bp (769 high quality bases) assembled on 2006-05-29

> BO14524.5prime
GAAGTTATCAGTCGACATGCATTGCCTGCTTCAACTGAGTCTGGCTGTGG
CCCTTTGCGCCCTCTTAGCCCCATCCACTACCTTGGCCGAACGCCGCAAT
GTGTACCGCCTGGGTGGACGCGCCTCCGACGCTCAGATGGAGGCCCGCTT
CACATCGTCGATTGCCAACAAGCTGACCTCGCTGAAGGGCACCACCACGA
CGACCACGGTTGCCCCCACTACCACCACCACGCCCACCTCCACTACGGAG
ACGACCACGCCGACTGCACCAACAACGTCCACTGGCACCTCGACGAGCAC
CACCACGCCCACAACCTCCGACACCACCACCGGTCGTGCCTTCCCCGCAA
TTCAAGACGATGTTGAGGAAGATGATGAGGAGATGCCCAGGGCGTTTGAA
GATGAAGAAGACGAAGGTGACGACAGCCTGGAGGACGAAGATGATGACGA
CGATGAGGAGAGCTACTTTGTGGCCGCTCCTTCCGCCGGTGGCAATAGCA
ATGCCGTGCAGCAGTCCTCAGAGTCCGGCTCGTTGGTCCGCCCCTCGGAA
CTCCAGTGGCGCCAGTTCCAGCAGGAACAGCGCAACCGTCGCCGAATCCA
GCGCCTCCAGCGTGAGCACAACCAGCGGATCAGGTCCCTCCTTCGCCGCC
AGAGGGCCGCCGAGAAGCGAAGCCAGCAACGCTTGCGCCGCCAGCGCCAA
CAGAGCCGTAAGCGCGTCTCACAGCGCCAGCGCCGCAACAGGAACCGTTC
CAAGGCCCAGCGCCAGCGCCA

BO14524.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG14420-PA 882 CG14420-RA 1..755 17..771 3625 99.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:42:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG14420-RA 1570 CG14420-RA 628..1382 17..771 3685 99.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:42:23
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2939654..2940339 86..771 3340 99.1 Plus
X 23542271 X 2939483..2939552 17..86 350 100 Plus
Blast to na_te.dros performed 2015-02-12 12:42:27
Subject Length Description Subject Range Query Range Score Percent Strand
G-element 4346 G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). 567..596 424..453 114 86.7 Plus
Dsim\ninja 6644 Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). 4768..4814 371..414 111 74.5 Plus
aurora-element 4263 aurora-element DMAURA 4263bp Derived from AB022762 (d1268008) (Rel. 59, Last updated, Version 1). 2637..2683 371..414 111 74.5 Plus

BO14524.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:30:34 Download gff for BO14524.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14420-PA 1..754 17..770 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:27:23 Download gff for BO14524.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14420-PA 1..754 17..770 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:11:31 Download gff for BO14524.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14420-RA 619..1381 7..770 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:27:47 Download gff for BO14524.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14420-RA 619..1381 7..770 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:27:47 Download gff for BO14524.5prime
Subject Subject Range Query Range Percent Splice Strand
X 2939474..2939552 7..86 95 -> Plus
X 2939655..2940338 87..770 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:11:31 Download gff for BO14524.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2833507..2833585 7..86 95 -> Plus
arm_X 2833688..2834371 87..770 99   Plus

BO14524.complete Sequence

913 bp assembled on 2006-10-11

GenBank Submission: FJ633167

> BO14524.complete
GAAGTTATCAGTCGACATGCATTGCCTGCTTCAACTGAGTCTGGCTGTGG
CCCTTTGCGCCCTCTTAGCCCCATCCACTACCTTGGCCGAACGCCGCAAT
GTGTACCGCCTGGGTGGACGCGCCTCCGACGCTCAGATGGAGGCCCGCTT
CACATCGTCGATTGCCAACAAGCTGACCTCGCTGAAGGGCACCACCACGA
CGACCACGGTTGCCCCCACTACCACCACCACGCCCACCTCCACTACGGAG
ACGACCACGCCGACTGCACCAACAACGTCCACTGGCACCTCGACGAGCAC
CACCACGCCCACAACCTCCGACACCACCACCGGTCGTGCCTTCCCCGCAA
TTCAAGACGATGTTGAGGAAGATGATGAGGAGATGCCCAGGGCGTTTGAA
GATGAAGAAGACGAAGGTGACGACAGCCTGGAGGACGAAGATGATGACGA
CGATGAGGAGAGCTACTTTGTGGCCGCTCCTTCCGCCGGTGGCAATAGCA
ATGCCGTGCAGCAGTCCTCAGAGTCCGGCTCGTTGGTCCGCCCCTCGGAA
CTCCAGTGGCGCCAGTTCCAGCAGGAACAGCGCAACCGTCGCCGAATCCA
GCGCCTCCAGCGTGAGCACAACCAGCGGATCAGGTCCCTCCTTCGCCGCC
AGAGGGCCGCCGAGAAGCGAAGCCAGCAACGCTTGCGCCGCCAGCGCCAA
CAGAGCCGTAAGCGCGTCTCACAGCGCCAGCGCCGCAACAGGAACCGTTC
CAAGGCCCAGCGCCAGCGCCAGAGGAGGAACAACATGAACCGTCGTCGCC
GCCAGCAGCAGCAGCGCCAGCGCAGACACCGCCAGCAGCAGCGTCGCCGG
CTCGTGCGCCTCATGCGCCGTCGTCGTCGTGGCGGACGTCGCAACGCAAG
CTTTCTAGACCAT

BO14524.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:34:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG14420-RA 882 CG14420-PA 1..879 17..895 4275 99.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:34:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG14420-RA 1570 CG14420-RA 628..1506 17..895 4275 99.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:34:45
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2939654..2940463 86..895 3930 99 Plus
X 23542271 X 2939483..2939552 17..86 350 100 Plus
Blast to na_te.dros performed 2014-11-27 07:34:47
Subject Length Description Subject Range Query Range Score Percent Strand
G-element 4346 G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). 567..596 424..453 114 86.7 Plus
Dsim\ninja 6644 Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). 4768..4814 371..414 111 74.5 Plus
aurora-element 4263 aurora-element DMAURA 4263bp Derived from AB022762 (d1268008) (Rel. 59, Last updated, Version 1). 2637..2683 371..414 111 74.5 Plus

BO14524.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:35:21 Download gff for BO14524.complete
Subject Subject Range Query Range Percent Splice Strand
CG14420-RA 1..882 17..899 98   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:51:10 Download gff for BO14524.complete
Subject Subject Range Query Range Percent Splice Strand
CG14420-RA 619..1510 7..900 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:23:37 Download gff for BO14524.complete
Subject Subject Range Query Range Percent Splice Strand
CG14420-RA 628..1506 17..897 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:35:22 Download gff for BO14524.complete
Subject Subject Range Query Range Percent Splice Strand
CG14420-RA 619..1510 7..900 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:01:01 Download gff for BO14524.complete
Subject Subject Range Query Range Percent Splice Strand
CG14420-RA 628..1506 17..897 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:01:01 Download gff for BO14524.complete
Subject Subject Range Query Range Percent Splice Strand
X 2939483..2939552 17..86 100 -> Plus
X 2939655..2940463 87..897 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:23:37 Download gff for BO14524.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 2833516..2833585 17..86 100 -> Plus
arm_X 2833688..2834496 87..897 98   Plus

BO14524.pep Sequence

Translation from 16 to 913

> BO14524.pep
MHCLLQLSLAVALCALLAPSTTLAERRNVYRLGGRASDAQMEARFTSSIA
NKLTSLKGTTTTTTVAPTTTTTPTSTTETTTPTAPTTSTGTSTSTTTPTT
SDTTTGRAFPAIQDDVEEDDEEMPRAFEDEEDEGDDSLEDEDDDDDEESY
FVAAPSAGGNSNAVQQSSESGSLVRPSELQWRQFQQEQRNRRRIQRLQRE
HNQRIRSLLRRQRAAEKRSQQRLRRQRQQSRKRVSQRQRRNRNRSKAQRQ
RQRRNNMNRRRRQQQQRQRRHRQQQRRRLVRLMRRRRRGGRRNASFLDH

BO14524.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:57:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG14420-PA 293 CG14420-PA 1..293 1..293 1477 100 Plus
CG14422-PA 294 CG14422-PA 8..294 4..293 350 34 Plus
CG14421-PA 238 CG14421-PA 1..232 1..272 342 34.8 Plus
CG14418-PB 284 CG14418-PB 124..277 130..292 183 31.2 Plus
CG14418-PA 327 CG14418-PA 167..320 130..292 183 31.2 Plus
CG14418-PB 284 CG14418-PB 102..266 164..291 151 30.3 Plus