Clone BO14525 Report

Search the DGRC for BO14525

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:145
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG11068-RA
Protein status:BO14525.pep: validated full length
Sequenced Size:931

Clone Sequence Records

BO14525.3prime Sequence

868 bp (780 high quality bases) assembled on 2006-05-29

> BO14525.3prime
ATGGTCTAGAAAGCTTGCGGACTTTAAGGGCTTGTACATCATGAGACGCC
GACGAACACATCCGATGGCCTCTTCCCAGCTGTTCGAGGACAGCAGATCC
TCATCCTTGGCCAAACGCTTTGCCTTGGAGGCGATGCCTTTGCGTTTGAT
CGTCTTCTTTTTCGTCAGCTTGGAAATTCCGGTTGGCAGTTTATCCGGTT
GCGATTTGCCGGCTTCAACCGTTTCGGGTTTCTTGGTTCGATTGCATTTA
CCCGGATTCCGTAACCGTAAGCTCTTCTTCATGTCCACACTGGCCATTGA
CAGAATCTGCTGAATGGATCGAACACGCGTAACGGCCGGTGGCGTAAAAC
TACGTATCCGTCGACCGGATGATGGTGATACCCTGGAAAATTTACGATTC
GGCTCCGGTGGCACGCGCATAGCTGCCTCCTTGGGCGGCAGATCCAATAG
ATTGTCGTACTTGGGACGACGCTCATTCAGCTGCGTCTTTAGACGGGACA
ACTTGGGCGGCGGCTTGTAGGACTCCAGGGTGTAGCGGGTGCTCTGCTTG
TTGCCACCCACCGAGGAGCGGCCCAGGGACCACAGACCCTTGCTCTCCTT
CTGGAATGCTCGGTAGATCAGGTGACGTGGAACAGGTATCGGTAGTTCTG
CGTGACGTTGCGAATCGTATAGCTCACGCTGTCGCATGCTAAGTCCTGGC
CAAGTTAATGCCGCTCGTTCCAGACCCTCGTCGATGCTGCAATTGTGCAT
GATGCACAATTCGCGAACGCAGTTGTAGAACTGAAGCGGACTGGCATCGC
GGGGCTTGAAGCGGCTCAATGCTTTGATGAGGCGGGCACGCTGCTCCCGT
TTTTGGTCCTCCGTGGAC

BO14525.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG11068-PA 900 CG11068-RA 48..897 868..19 4250 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:54:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG11068-RA 1270 CG11068-RA 233..1082 868..19 4250 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:54:20
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13955744..13956386 661..19 3215 100 Minus
X 23542271 X 13955468..13955675 868..661 1040 100 Minus
Blast to na_te.dros performed 2015-01-31 10:54:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 2777..2803 681..655 108 88.9 Minus

BO14525.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:30:34 Download gff for BO14525.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11068-PA 48..900 15..868 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:27:25 Download gff for BO14525.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11068-PA 48..900 15..868 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:44:24 Download gff for BO14525.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11068-RA 218..1070 15..868 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:51:47 Download gff for BO14525.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11068-RA 233..1085 15..868 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:51:47 Download gff for BO14525.3prime
Subject Subject Range Query Range Percent Splice Strand
X 13955468..13955675 661..868 100 -> Minus
X 13955745..13956389 15..660 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:44:24 Download gff for BO14525.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13849501..13849708 661..868 100 -> Minus
arm_X 13849778..13850422 15..660 99   Minus

BO14525.5prime Sequence

933 bp (772 high quality bases) assembled on 2006-05-29

> BO14525.5prime
GAAGTTATCAGTCGACATGGCCAAGGATCAAGAGGGAAACACATATCAAC
CAACCGTCCCGGAGTCCACGGAGGACCAAAAACGGGAGCAGCGTGCCCGC
CTCATCAAAGCATTGAGCCGCTTCAAGCCCCGCGATGCCAGTCCGCTTCA
GTTCTACAACTGCGTTCGCGAATTGTGCATCATGCACAATTGCAGCATCG
ACGAGGGTCTGGAACGAGCGGCATTAACTTGGCCAGGACTTAGCATGCGA
CAGCGTGAGCTATACGATTCGCAACGTCACGCAGAACTACCGATACCTGT
TCCACGTCACCTGATCTACCGAGCATTCCAGAAGGAGAGCAAGGGTCTGT
GGTCCCTGGGCCGCTCCTCGGTGGGTGGCAACAAGCAGAGCACCCGCTAC
ACCCTGGAGTCCTACAAGCCGCCGCCCAAGTTGTCCCGTCTAAAGACGCA
GCTGAATGAGCGTCGTCCCAAGTACGACAATCTATTGGATCTGCCGCCCA
AGGAGGCAGCTATGCGCGTGCCACCGGAGCCGAATCGTAAATTTTCCAGG
GTATCACCATCATCCGGTCGACGGATACGTAGTTTTACGCCACCGGCCGT
TACGCGTGTTCGATCCATTCAGCAGATTCTGTCAATGGCCAGTGTGGACA
TGAAGAAGAGCTTACGGTTACGGAATCCGGGTAAATGCAATCGAACCAAG
AAACCCGAAACGGTTGAAGCCGGCAAATCGCAACCGGATAAACTGCCAAC
CGGAATTTCCAAGCTGACGAAAAAGAAGACGATCAAACGCAAAGGCATCG
CCTCCAAGGCAAAGCGTTTGGCCAAGGATGAGGATCTGCTGTCCTCGAAC
AGCTGGGAAGAGGCCATCGGATGTGTTCGTCGGCGTCTCATGATGTACAA
GCCCTTAAAGTCCGCAAGCTTTCTAGACCATTC

BO14525.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG11068-PA 900 CG11068-RA 1..897 17..913 4485 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 22:53:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG11068-RA 1270 CG11068-RA 186..1082 17..913 4485 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 22:53:37
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13955744..13956386 271..913 3215 100 Plus
X 23542271 X 13955421..13955675 17..271 1275 100 Plus
Blast to na_te.dros performed on 2015-02-09 22:53:39 has no hits.

BO14525.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:30:35 Download gff for BO14525.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11068-PA 1..900 17..917 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:27:26 Download gff for BO14525.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11068-PA 1..900 17..917 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:24:14 Download gff for BO14525.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11068-RA 166..1070 8..917 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:49:55 Download gff for BO14525.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11068-RA 181..1085 8..917 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:49:55 Download gff for BO14525.5prime
Subject Subject Range Query Range Percent Splice Strand
X 13955416..13955675 8..271 98 -> Plus
X 13955745..13956389 272..917 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:24:14 Download gff for BO14525.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13849449..13849708 8..271 98 -> Plus
arm_X 13849778..13850422 272..917 99   Plus

BO14525.complete Sequence

931 bp assembled on 2006-10-11

GenBank Submission: FJ633168

> BO14525.complete
GAAGTTATCAGTCGACATGGCCAAGGATCAAGAGGGAAACACATATCAAC
CAACCGTCCCGGAGTCCACGGAGGACCAAAAACGGGAGCAGCGTGCCCGC
CTCATCAAAGCATTGAGCCGCTTCAAGCCCCGCGATGCCAGTCCGCTTCA
GTTCTACAACTGCGTTCGCGAATTGTGCATCATGCACAATTGCAGCATCG
ACGAGGGTCTGGAACGAGCGGCATTAACTTGGCCAGGACTTAGCATGCGA
CAGCGTGAGCTATACGATTCGCAACGTCACGCAGAACTACCGATACCTGT
TCCACGTCACCTGATCTACCGAGCATTCCAGAAGGAGAGCAAGGGTCTGT
GGTCCCTGGGCCGCTCCTCGGTGGGTGGCAACAAGCAGAGCACCCGCTAC
ACCCTGGAGTCCTACAAGCCGCCGCCCAAGTTGTCCCGTCTAAAGACGCA
GCTGAATGAGCGTCGTCCCAAGTACGACAATCTATTGGATCTGCCGCCCA
AGGAGGCAGCTATGCGCGTGCCACCGGAGCCGAATCGTAAATTTTCCAGG
GTATCACCATCATCCGGTCGACGGATACGTAGTTTTACGCCACCGGCCGT
TACGCGTGTTCGATCCATTCAGCAGATTCTGTCAATGGCCAGTGTGGACA
TGAAGAAGAGCTTACGGTTACGGAATCCGGGTAAATGCAATCGAACCAAG
AAACCCGAAACGGTTGAAGCCGGCAAATCGCAACCGGATAAACTGCCAAC
CGGAATTTCCAAGCTGACGAAAAAGAAGACGATCAAACGCAAAGGCATCG
CCTCCAAGGCAAAGCGTTTGGCCAAGGATGAGGATCTGCTGTCCTCGAAC
AGCTGGGAAGAGGCCATCGGATGTGTTCGTCGGCGTCTCATGATGTACAA
GCCCTTAAAGTCCGCAAGCTTTCTAGACCAT

BO14525.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:19:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG11068-RA 900 CG11068-PA 1..897 17..913 4485 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG11068-RA 1270 CG11068-RA 186..1082 17..913 4485 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:10
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13955744..13956386 271..913 3215 100 Plus
X 23542271 X 13955421..13955675 17..271 1275 100 Plus
Blast to na_te.dros performed 2014-11-26 16:19:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 2777..2803 251..277 108 88.9 Plus

BO14525.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:35:24 Download gff for BO14525.complete
Subject Subject Range Query Range Percent Splice Strand
CG11068-RA 1..900 17..917 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:51:11 Download gff for BO14525.complete
Subject Subject Range Query Range Percent Splice Strand
CG11068-RA 166..1070 8..917 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:57:50 Download gff for BO14525.complete
Subject Subject Range Query Range Percent Splice Strand
CG11068-RA 171..1067 17..915 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:35:24 Download gff for BO14525.complete
Subject Subject Range Query Range Percent Splice Strand
CG11068-RA 166..1070 8..917 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:16:17 Download gff for BO14525.complete
Subject Subject Range Query Range Percent Splice Strand
CG11068-RA 186..1082 17..915 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:16:17 Download gff for BO14525.complete
Subject Subject Range Query Range Percent Splice Strand
X 13955421..13955675 17..271 100 -> Plus
X 13955745..13956386 272..915 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:57:50 Download gff for BO14525.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 13849454..13849708 17..271 100 -> Plus
arm_X 13849778..13850419 272..915 99   Plus

BO14525.pep Sequence

Translation from 16 to 931

> BO14525.pep
MAKDQEGNTYQPTVPESTEDQKREQRARLIKALSRFKPRDASPLQFYNCV
RELCIMHNCSIDEGLERAALTWPGLSMRQRELYDSQRHAELPIPVPRHLI
YRAFQKESKGLWSLGRSSVGGNKQSTRYTLESYKPPPKLSRLKTQLNERR
PKYDNLLDLPPKEAAMRVPPEPNRKFSRVSPSSGRRIRSFTPPAVTRVRS
IQQILSMASVDMKKSLRLRNPGKCNRTKKPETVEAGKSQPDKLPTGISKL
TKKKTIKRKGIASKAKRLAKDEDLLSSNSWEEAIGCVRRRLMMYKPLKSA
SFLDH

BO14525.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:57:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG11068-PA 299 CG11068-PA 1..299 1..299 1549 100 Plus