Clone BO14528 Report

Search the DGRC for BO14528

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:145
Well:28
Vector:pDNR-Dual
Associated Gene/TranscriptCG13544-RA
Protein status:BO14528.pep: validated full length
Sequenced Size:1135

Clone Sequence Records

BO14528.3prime Sequence

835 bp (749 high quality bases) assembled on 2006-05-29

> BO14528.3prime
ATGGTCTAGAAAGCTTGCGCCGCAATAGATTTCGGTGAATACGGGAATGC
GGCAATAGCAGGTGCAGTTCTCGAACTCATTTGCATATTGCGATATTTCA
GCAACGAACCTCTCCAAATTTTGCGGGTTTTTGAATATGTTCTTGTCCAC
AGTCAAATCGTTGTCCACCAGGATTTTCCAGCGTCTCATACTGGCGATGA
CATCGCCGCAGAAGTCGCGTTTACTCTTCTCCGCCGATTTCTTGATGTTC
TGCATAAGCCCCTTGTGCTTTCTGTACGCCCTATTCTTTTCGACCAACGC
CGCATGGGCTTCTCTCTGTGAAGCATCGTAAATCTCGATGATTCTGTACA
TGCGCCTTTCAATATTCTTGGACATTTTCAGGGCGGCCTCGCACTTTGGC
TTGCATTGGCTCCAATAGCGGGCTCCTTCGAATGGGACTTTGCTGAACTT
GTTGCTCCTCTTGAAAGTTTCCGTATCCTTTCCTCGATCGGCCAGTTCTT
TAGCCAGTTGCGTCTTAACCCTTCCATTGTGGAAGCGAAAATGCAAGCTG
GCCAGCAGCTTCTCTACTCGCGACATGCAGTTTGAGTTCTTGAGCGAATA
TACACCTGGAATCGCGAAGGTGCGGAGCAGGTGGTGCAGCTTGAAGGCCA
CGCAATTGAGCAGATCCTCGGCGGCGCACACCTGCTTCCTGAGCAATTTG
CTGTGATCGTGAATGGTGCGCCGGCTCTTCCATCCTCGGAATAGGGCCTG
GATCTTGGTGGCCGCCCGATGGTGGTGATCCTGAACCCGCTTCTGCAGCA
GGTTCTCCACATACCTGAAGTGGTTTTTTCGGACC

BO14528.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG13544-PA 1104 CG13544-RA 285..1101 835..19 3935 99.2 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:44:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG13544-RA 1262 CG13544-RA 384..1200 835..19 3995 99.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:44:30
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23139452..23139765 267..580 1525 99 Plus
2R 25286936 2R 23139820..23140074 581..835 1245 99.2 Plus
2R 25286936 2R 23139142..23139395 19..272 1240 99.2 Plus
Blast to na_te.dros performed on 2015-02-12 03:44:31 has no hits.

BO14528.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:30:41 Download gff for BO14528.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13544-PA 285..1104 15..835 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:27:35 Download gff for BO14528.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13544-PA 285..1104 15..835 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:42:19 Download gff for BO14528.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13544-RA 384..1203 15..835 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:48:20 Download gff for BO14528.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13544-RA 384..1203 15..835 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:48:20 Download gff for BO14528.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 23139138..23139395 15..272 98 <- Plus
2R 23139458..23139765 273..580 99 <- Plus
2R 23139820..23140074 581..835 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:42:19 Download gff for BO14528.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19026661..19026918 15..272 98 <- Plus
arm_2R 19026981..19027288 273..580 99 <- Plus
arm_2R 19027343..19027597 581..835 99   Plus

BO14528.5prime Sequence

905 bp (735 high quality bases) assembled on 2006-05-29

> BO14528.5prime
GAAGTTATCAGTCGACATGTTCTCAGGACTTATACCCATGATGCAGCAGA
CTCGGAGGGCCACGGTTCCACTAGGTGGGGACAGCCGAAGTGGCAACACC
GAGTCCCAAATTGGATCCAGTAAATCTTCTAATTGCAGATTGCACCTAAT
TTCGCGAACCGGAAAGCTTCTTCTGGACTACAAGCAATACAAGGCAGCCC
GAACTATCCAAAACAACTGGCGGAAATTCTATTTTCGAAAGTATTTCAAG
GATCTAAGAAAGGCGGTCATCACGATTCAGCGCTGGTGGCGCGGATTCTC
GGTCCGAAAAAACCACTTCAGGTATGTGGAGAACCTGCTGCAGAAGCGGG
TTCAGGATCACCACCATCGGGCGGCCACCAAGATCCAGGCCCTATTCCGA
GGATGGAAGAGCCGGCGCACCATTCACGATCACAGCAAATTGCTCAGGAA
GCAGGTGTGCGCCGCCGAGGATCTGCTCAATTGCGTGGCCTTCAAGCTGC
ACCACCTGCTCCGCACCTTCGCGATTCCAGGTGTATATTCGCTCAAGAAC
TCAAACTGCATGTCGCGAGTAGAGAAGCTGCTGGCCAGCTTGCATTTTCG
CTTCCACAATGGAAGGGTTAAGACGCAACTGGCTAAAGAACTGGCCGATC
GAGGAAAGGATACGGAAACTTTCAAGAGGAGCAACAAGTTCAGCAAAGTC
CCATTCGAAGGAGCCCGCTATTGGAGCCAATGCAAGCCAAAGTGCGAGGC
CGCCCTGAAAATGTCCAAGAATATTGAAAGGCGCATGTACAGAATCATCG
AGATTTACGATGCTTCACAGAGAGAAGCCCATGCGGCGTTGGTCGAAAAG
ATAAGGGCGTACAGAAAGCACAAGGGGCTTATGCAAAACATCAAGAAATC
GGCGG

BO14528.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:23:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG13544-PA 1104 CG13544-RA 1..889 17..905 4270 99.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:25:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG13544-RA 1262 CG13544-RA 100..988 17..905 4340 99.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:25:43
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23139820..23140219 555..156 1970 99.5 Minus
2R 25286936 2R 23139452..23139765 869..556 1495 98.4 Minus
2R 25286936 2R 23140408..23140478 87..17 355 100 Minus
2R 25286936 2R 23140284..23140353 156..87 350 100 Minus
2R 25286936 2R 23139354..23139395 905..864 195 97.6 Minus
Blast to na_te.dros performed 2015-02-13 07:25:45
Subject Length Description Subject Range Query Range Score Percent Strand
NOF 4347 NOF FB 4347bp Derived from X51937 (g8297) (Rel. 44, Last updated, Version 6). 2537..2610 207..276 108 64.9 Plus

BO14528.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:30:42 Download gff for BO14528.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13544-PA 1..889 17..905 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:27:36 Download gff for BO14528.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13544-PA 1..889 17..905 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 09:31:02 Download gff for BO14528.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13544-RA 95..988 8..905 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:35:10 Download gff for BO14528.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13544-RA 95..988 8..905 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:35:10 Download gff for BO14528.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 23139354..23139395 864..905 97 <- Minus
2R 23139458..23139765 556..863 98 <- Minus
2R 23139820..23140218 157..555 99 <- Minus
2R 23140284..23140352 88..156 100 <- Minus
2R 23140408..23140483 8..87 95   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:31:02 Download gff for BO14528.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19026877..19026918 864..905 97 <- Minus
arm_2R 19026981..19027288 556..863 98 <- Minus
arm_2R 19027343..19027741 157..555 99 <- Minus
arm_2R 19027807..19027875 88..156 100 <- Minus
arm_2R 19027931..19028006 8..87 95   Minus

BO14528.complete Sequence

1135 bp assembled on 2006-10-11

GenBank Submission: FJ633169

> BO14528.complete
GAAGTTATCAGTCGACATGTTCTCAGGACTTATACCCATGATGCAGCAGA
CTCGGAGGGCCACGGTTCCACTAGGTGGGGACAGCCGAAGTGGCAACACC
GAGTCCCAAATTGGATCCAGTAAATCTTCTAATTGCAGATTGCACCTAAT
TTCGCGAACCGGAAAGCTTCTTCTGGACTACAAGCAATACAAGGCAGCCC
GAACTATCCAAAACAACTGGCGGAAATTCTATTTTCGAAAGTATTTCAAG
GATCTAAGAAAGGCGGTCATCACGATTCAGCGCTGGTGGCGCGGATTCTC
GGTCCGAAAAAACCACTTCAGGTATGTGGAGAACCTGCTGCAGAAGCGGG
TTCAGGATCACCACCATCGGGCGGCCACCAAGATCCAGGCCCTATTCCGA
GGATGGAAGAGCCGGCGCACCATTCACGATCACAGCAAATTGCTCAGGAA
GCAGGTGTGCGCCGCCGAGGATCTGCTCAATTGCGTGGCCTTCAAGCTGC
ACCACCTGCTCCGCACCTTCGCGATTCCAGGTGTATATTCGCTCAAGAAC
TCAAACTGCATGTCGCGAGTAGAGAAGCTGCTGGCCAGCTTGCATTTTCG
CTTCCACAATGGAAGGGTTAAGACGCAACTGGCTAAAGAACTGGCCGATC
GAGGAAAGGATACGGAAACTTTCAAGAGGAGCAACAAGTTCAGCAAAGTC
CCATTCGAAGGAGCCCGCTATTGGAGCCAATGCAAGCCAAAGTGCGAGGC
CGCCCTGAAAATGTCCAAGAATATTGAAAGGCGCATGTACAGAATCATCG
AGATTTACGATGCTTCACAGAGAGAAGCCCATGCGGCGTTGGTCGAAAAG
AATAGGGCGTACAGAAAGCACAAGGGGCTTATGCAGAACATCAAGAAATC
GGCGGAGAAGAGTAAACGCGACTTCTGCGGCGATGTCATCGCCAGTATGA
GACGCTGGAAAATCCTGGTGGACAACGATTTGACTGTGGACAAGAACATA
TTCAAAAACCCGCAAAATTTGGAGAGGTTCGTTGCTGAAATATCGCAATA
TGCAAATGAGTTCGAGAACTGCACCTGCTATTGCCGCATTCCCGTATTCA
CCGAAATCTATTGCGGCGCAAGCTTTCTAGACCAT

BO14528.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:02:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG13544-RA 1104 CG13544-PA 1..1101 17..1117 5415 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:02:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG13544-RA 1262 CG13544-RA 100..1200 17..1117 5415 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:02:22
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23139820..23140219 555..156 1970 99.5 Minus
2R 25286936 2R 23139452..23139765 869..556 1525 99 Minus
2R 25286936 2R 23139142..23139395 1117..864 1240 99.2 Minus
2R 25286936 2R 23140408..23140478 87..17 355 100 Minus
2R 25286936 2R 23140284..23140353 156..87 350 100 Minus
Blast to na_te.dros performed on 2014-11-27 14:02:23 has no hits.

BO14528.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:35:28 Download gff for BO14528.complete
Subject Subject Range Query Range Percent Splice Strand
CG13544-RA 1..1104 17..1121 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:51:13 Download gff for BO14528.complete
Subject Subject Range Query Range Percent Splice Strand
CG13544-RA 102..1210 8..1121 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:31:55 Download gff for BO14528.complete
Subject Subject Range Query Range Percent Splice Strand
CG13544-RA 105..1200 22..1119 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:35:28 Download gff for BO14528.complete
Subject Subject Range Query Range Percent Splice Strand
CG13544-RA 102..1210 8..1121 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:01:56 Download gff for BO14528.complete
Subject Subject Range Query Range Percent Splice Strand
CG13544-RA 105..1200 22..1119 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:01:56 Download gff for BO14528.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23139140..23139395 864..1119 98 <- Minus
2R 23139458..23139765 556..863 99 <- Minus
2R 23139820..23140218 157..555 99 <- Minus
2R 23140284..23140352 88..156 100 <- Minus
2R 23140408..23140473 22..87 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:31:55 Download gff for BO14528.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19026663..19026918 864..1119 98 <- Minus
arm_2R 19026981..19027288 556..863 99 <- Minus
arm_2R 19027343..19027741 157..555 99 <- Minus
arm_2R 19027807..19027875 88..156 100 <- Minus
arm_2R 19027931..19027996 22..87 100   Minus

BO14528.pep Sequence

Translation from 16 to 1135

> BO14528.pep
MFSGLIPMMQQTRRATVPLGGDSRSGNTESQIGSSKSSNCRLHLISRTGK
LLLDYKQYKAARTIQNNWRKFYFRKYFKDLRKAVITIQRWWRGFSVRKNH
FRYVENLLQKRVQDHHHRAATKIQALFRGWKSRRTIHDHSKLLRKQVCAA
EDLLNCVAFKLHHLLRTFAIPGVYSLKNSNCMSRVEKLLASLHFRFHNGR
VKTQLAKELADRGKDTETFKRSNKFSKVPFEGARYWSQCKPKCEAALKMS
KNIERRMYRIIEIYDASQREAHAALVEKNRAYRKHKGLMQNIKKSAEKSK
RDFCGDVIASMRRWKILVDNDLTVDKNIFKNPQNLERFVAEISQYANEFE
NCTCYCRIPVFTEIYCGASFLDH

BO14528.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:57:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG13544-PA 367 CG13544-PA 1..367 1..367 1944 100 Plus
CG31735-PC 312 CG31735-PC 4..294 60..349 486 36.4 Plus
CG31735-PA 312 CG31735-PA 4..294 60..349 486 36.4 Plus
CG12448-PC 352 CG12448-PC 40..351 34..366 428 30.4 Plus
CG18063-PD 371 CG18063-PD 43..355 45..354 398 30.6 Plus