Clone BO14531 Report

Search the DGRC for BO14531

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:145
Well:31
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO14531.pep: validated full length
Sequenced Size:373

Clone Sequence Records

BO14531.3prime Sequence

371 bp (370 high quality bases) assembled on 2006-05-29

> BO14531.3prime
ATGGTCTAGAAAGCTTGCTGAGTAAATGCATGAAATCGTTTTAGTTGCAT
TCAGCTTTTCGCGCTCTAGAAGTGCCATAGTCAGTGGATCATTGGGGACA
TTATTCTCGCTGAAATAGAAGCACGTTCCCAGTGGAGAGAAGTGCACCTC
GTTGAACTGGGTGGGTGTCATCACGATTGTTCCCACTGCTGCCCTCAGGG
GGACTAGTTGATGTATCACATTATCGTTGGGTAGATACCGTCTGTCCTCC
AGCTTGACAAACGAATTCAAATAGTGATTGTAGGCGATGTCTTGTTTTCG
ATTTTCCAAAGCTCGAAATCCTTTGGAACCGGCGTGTTTCCTTTGTGAGT
CCTCCATGTCGACTGATAACT

BO14531.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:24:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG14017-PB 342 CG14017-RB 1..339 357..19 1695 100 Minus
CG14017-PA 717 CG14017-RA 1..327 357..31 1635 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:52:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG14017-RA 1179 CG14017-RA 78..408 361..31 1655 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:52:00
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5553974..5554304 361..31 1655 100 Minus
Blast to na_te.dros performed on 2015-02-11 11:52:02 has no hits.

BO14531.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:30:47 Download gff for BO14531.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14017-PB 1..342 18..357 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:27:43 Download gff for BO14531.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14017-PB 1..342 18..357 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 20:33:25 Download gff for BO14531.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14017-RA 70..413 26..369 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:05:58 Download gff for BO14531.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14017-RA 70..413 26..369 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:05:58 Download gff for BO14531.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 5553966..5554304 31..369 98 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 20:33:25 Download gff for BO14531.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5553966..5554304 31..369 98 -> Minus

BO14531.5prime Sequence

371 bp (370 high quality bases) assembled on 2006-05-29

> BO14531.5prime
GAAGTTATCAGTCGACATGGAGGACTCACAAAGGAAACACGCCGGTTCCA
AAGGATTTCGAGCTTTGGAAAATCGAAAACAAGACATCGCCTACAATCAC
TATTTGAATTCGTTTGTCAAGCTGGAGGACAGACGGTATCTACCCAACGA
TAATGTGATACATCAACTAGTCCCCCTGAGGGCAGCAGTGGGAACAATCG
TGATGACACCCACCCAGTTCAACGAGGTGCACTTCTCTCCACTGGGAACG
TGCTTCTATTTCAGCGAGAATAATGTCCCCAATGATCCACTGACTATGGC
ACTTCTAGAGCGCGAAAAGCTGAATGCAACTAAAACGATTTCATGCATTT
ACTCAGCAAGCTTTCTAGACC

BO14531.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:24:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG14017-PB 342 CG14017-RB 1..339 17..355 1695 100 Plus
CG14017-PA 717 CG14017-RA 1..327 17..343 1635 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:46:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG14017-RA 1179 CG14017-RA 78..408 13..343 1655 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 13:46:32
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5553974..5554304 13..343 1655 100 Plus
Blast to na_te.dros performed on 2015-02-12 13:46:34 has no hits.

BO14531.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:30:48 Download gff for BO14531.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14017-PB 1..342 17..356 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:27:44 Download gff for BO14531.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14017-PB 1..342 17..356 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 12:36:14 Download gff for BO14531.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14017-RA 70..413 5..348 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:05:20 Download gff for BO14531.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14017-RA 70..413 5..348 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:05:20 Download gff for BO14531.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 5553966..5554304 5..343 98 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 12:36:14 Download gff for BO14531.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5553966..5554304 5..343 98 -> Plus

BO14531.complete Sequence

373 bp assembled on 2006-10-11

GenBank Submission: FJ633170

> BO14531.complete
GAAGTTATCAGTCGACATGGAGGACTCACAAAGGAAACACGCCGGTTCCA
AAGGATTTCGAGCTTTGGAAAATCGAAAACAAGACATCGCCTACAATCAC
TATTTGAATTCGTTTGTCAAGCTGGAGGACAGACGGTATCTACCCAACGA
TAATGTGATACATCAACTAGTCCCCCTGAGGGCAGCAGTGGGAACAATCG
TGATGACACCCACCCAGTTCAACGAGGTGCACTTCTCTCCACTGGGAACG
TGCTTCTATTTCAGCGAGAATAATGTCCCCAATGATCCACTGACTATGGC
ACTTCTAGAGCGCGAAAAGCTGAATGCAACTAAAACGATTTCATGCATTT
ACTCAGCAAGCTTTCTAGACCAT

BO14531.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:59:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG14017-RA 717 CG14017-PA 1..327 17..343 1635 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:59:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG14017-RA 1179 CG14017-RA 78..408 13..343 1655 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:59:19
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5553974..5554304 13..343 1655 100 Plus
Blast to na_te.dros performed on 2014-11-27 19:59:20 has no hits.

BO14531.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:34:41 Download gff for BO14531.complete
Subject Subject Range Query Range Percent Splice Strand
CG14017-RB 1..342 17..356 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:50:48 Download gff for BO14531.complete
Subject Subject Range Query Range Percent Splice Strand
CG14017-RB 70..420 5..355 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:05:12 Download gff for BO14531.complete
Subject Subject Range Query Range Percent Splice Strand
CG14017-RA 82..413 17..348 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:34:43 Download gff for BO14531.complete
Subject Subject Range Query Range Percent Splice Strand
CG14017-RB 70..420 5..355 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:12:10 Download gff for BO14531.complete
Subject Subject Range Query Range Percent Splice Strand
CG14017-RA 82..413 17..348 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:12:10 Download gff for BO14531.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5553978..5554304 17..343 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:05:12 Download gff for BO14531.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5553978..5554304 17..343 100 -> Plus

BO14531.pep Sequence

Translation from 16 to 373

> BO14531.pep
MEDSQRKHAGSKGFRALENRKQDIAYNHYLNSFVKLEDRRYLPNDNVIHQ
LVPLRAAVGTIVMTPTQFNEVHFSPLGTCFYFSENNVPNDPLTMALLERE
KLNATKTISCIYSASFLDH

BO14531.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:58:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG14017-PA 238 CG14017-PA 1..118 1..118 577 94.9 Plus