Clone Sequence Records
BO14531.3prime Sequence
371 bp (370 high quality bases) assembled on 2006-05-29
> BO14531.3prime
ATGGTCTAGAAAGCTTGCTGAGTAAATGCATGAAATCGTTTTAGTTGCAT
TCAGCTTTTCGCGCTCTAGAAGTGCCATAGTCAGTGGATCATTGGGGACA
TTATTCTCGCTGAAATAGAAGCACGTTCCCAGTGGAGAGAAGTGCACCTC
GTTGAACTGGGTGGGTGTCATCACGATTGTTCCCACTGCTGCCCTCAGGG
GGACTAGTTGATGTATCACATTATCGTTGGGTAGATACCGTCTGTCCTCC
AGCTTGACAAACGAATTCAAATAGTGATTGTAGGCGATGTCTTGTTTTCG
ATTTTCCAAAGCTCGAAATCCTTTGGAACCGGCGTGTTTCCTTTGTGAGT
CCTCCATGTCGACTGATAACT
BO14531.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:24:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14017-PB | 342 | CG14017-RB | 1..339 | 357..19 | 1695 | 100 | Minus |
CG14017-PA | 717 | CG14017-RA | 1..327 | 357..31 | 1635 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:52:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14017-RA | 1179 | CG14017-RA | 78..408 | 361..31 | 1655 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:52:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5553974..5554304 | 361..31 | 1655 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 11:52:02 has no hits.
BO14531.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:30:47 Download gff for
BO14531.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-PB | 1..342 | 18..357 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:27:43 Download gff for
BO14531.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-PB | 1..342 | 18..357 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 20:33:25 Download gff for
BO14531.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RA | 70..413 | 26..369 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:05:58 Download gff for
BO14531.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RA | 70..413 | 26..369 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:05:58 Download gff for
BO14531.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5553966..5554304 | 31..369 | 98 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 20:33:25 Download gff for
BO14531.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5553966..5554304 | 31..369 | 98 | -> | Minus |
BO14531.5prime Sequence
371 bp (370 high quality bases) assembled on 2006-05-29
> BO14531.5prime
GAAGTTATCAGTCGACATGGAGGACTCACAAAGGAAACACGCCGGTTCCA
AAGGATTTCGAGCTTTGGAAAATCGAAAACAAGACATCGCCTACAATCAC
TATTTGAATTCGTTTGTCAAGCTGGAGGACAGACGGTATCTACCCAACGA
TAATGTGATACATCAACTAGTCCCCCTGAGGGCAGCAGTGGGAACAATCG
TGATGACACCCACCCAGTTCAACGAGGTGCACTTCTCTCCACTGGGAACG
TGCTTCTATTTCAGCGAGAATAATGTCCCCAATGATCCACTGACTATGGC
ACTTCTAGAGCGCGAAAAGCTGAATGCAACTAAAACGATTTCATGCATTT
ACTCAGCAAGCTTTCTAGACC
BO14531.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:24:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14017-PB | 342 | CG14017-RB | 1..339 | 17..355 | 1695 | 100 | Plus |
CG14017-PA | 717 | CG14017-RA | 1..327 | 17..343 | 1635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:46:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14017-RA | 1179 | CG14017-RA | 78..408 | 13..343 | 1655 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 13:46:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5553974..5554304 | 13..343 | 1655 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 13:46:34 has no hits.
BO14531.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:30:48 Download gff for
BO14531.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-PB | 1..342 | 17..356 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:27:44 Download gff for
BO14531.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-PB | 1..342 | 17..356 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 12:36:14 Download gff for
BO14531.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RA | 70..413 | 5..348 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:05:20 Download gff for
BO14531.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RA | 70..413 | 5..348 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:05:20 Download gff for
BO14531.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5553966..5554304 | 5..343 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 12:36:14 Download gff for
BO14531.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5553966..5554304 | 5..343 | 98 | -> | Plus |
BO14531.complete Sequence
373 bp assembled on 2006-10-11
GenBank Submission: FJ633170
> BO14531.complete
GAAGTTATCAGTCGACATGGAGGACTCACAAAGGAAACACGCCGGTTCCA
AAGGATTTCGAGCTTTGGAAAATCGAAAACAAGACATCGCCTACAATCAC
TATTTGAATTCGTTTGTCAAGCTGGAGGACAGACGGTATCTACCCAACGA
TAATGTGATACATCAACTAGTCCCCCTGAGGGCAGCAGTGGGAACAATCG
TGATGACACCCACCCAGTTCAACGAGGTGCACTTCTCTCCACTGGGAACG
TGCTTCTATTTCAGCGAGAATAATGTCCCCAATGATCCACTGACTATGGC
ACTTCTAGAGCGCGAAAAGCTGAATGCAACTAAAACGATTTCATGCATTT
ACTCAGCAAGCTTTCTAGACCAT
BO14531.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:59:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14017-RA | 717 | CG14017-PA | 1..327 | 17..343 | 1635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:59:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14017-RA | 1179 | CG14017-RA | 78..408 | 13..343 | 1655 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:59:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5553974..5554304 | 13..343 | 1655 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 19:59:20 has no hits.
BO14531.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:34:41 Download gff for
BO14531.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RB | 1..342 | 17..356 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:50:48 Download gff for
BO14531.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RB | 70..420 | 5..355 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:05:12 Download gff for
BO14531.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RA | 82..413 | 17..348 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:34:43 Download gff for
BO14531.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RB | 70..420 | 5..355 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:12:10 Download gff for
BO14531.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RA | 82..413 | 17..348 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:12:10 Download gff for
BO14531.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5553978..5554304 | 17..343 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:05:12 Download gff for
BO14531.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5553978..5554304 | 17..343 | 100 | -> | Plus |
BO14531.pep Sequence
Translation from 16 to 373
> BO14531.pep
MEDSQRKHAGSKGFRALENRKQDIAYNHYLNSFVKLEDRRYLPNDNVIHQ
LVPLRAAVGTIVMTPTQFNEVHFSPLGTCFYFSENNVPNDPLTMALLERE
KLNATKTISCIYSASFLDH
BO14531.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:58:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14017-PA | 238 | CG14017-PA | 1..118 | 1..118 | 577 | 94.9 | Plus |