Clone BO14532 Report

Search the DGRC for BO14532

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:145
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptPast1-RA
Protein status:BO14532.pep: validated full length
Sequenced Size:1654

Clone Sequence Records

BO14532.3prime Sequence

841 bp (745 high quality bases) assembled on 2006-05-29

> BO14532.3prime
ATGGTCTAGAAAGCTTGCGTCATAGCGCTTCGACGGCGGTACTAAGTGCT
CCGGCAGCACGGTGGGCAGCTCGCAGCCTTCCAGCTTGACGTTGATTAAG
TGCAAGGCCAGCGCGAACTCGTCAGAGTCCAGGAACCCATCGCCGTCGAC
GTCCGACAGTTTCCAGATCTTGCTGAGCACCGAGTTGGGCAGTTTCGATT
TGATGAGTTCCTGCTTGGCAGTTGCACCGGATATCTTGCCATCGACTGGT
CCCAGCCCATTGAAGATGCCATCTGTGCGCGGCTTGTCCTTGTTGCAGAT
CCACTCGTGCTCTCCGTAGCCGGCATCGATGCCCTCGCCCTTCATGTAGC
CGAATGGTGAGACATGGTCGTCGATGACTCCCTCGAAGGCACCACCCTTG
ACGATTGGGTCCGCGACCATGGTCATCTCCTCCTGGGGAATCATCTCCAT
CAGGCGGGCAATGTCCTTGGCCAGCATGTTGTCCACGATGTCCAGCAGAT
GGGGCTTGAGGGAGTGGAACTTGGTGAAGTCCTGGTGCTGCAGGACCTCC
TGCATCTTCTTGATGTCGGGGAAGTCGCCGGGAGAAATGGAGTGCTCGCG
CTGGATGCGATCGTATACCTGGCCGAGGTTCTTAATCAAGTCCTTCTTCT
TGCTGTCCTTGCCGAACACAGAGGGCATGTCCTTGCGCAGCTCGGCAATG
ATGAAGGCATGCACCTTGGCCAGGCGCGCCCGCTTGATCAGATCGTTCAG
CTTGCGCAGGGCGGCGTTACGCGGCAGGGACTGCAGATCCCTGAACAGAT
CCTGTTCCTCGTCCTCGAACAGTCGGCGGGTGGCGTCCAAA

BO14532.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:24:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG6148-PA 1623 Past1-RA 802..1620 837..19 4070 99.8 Minus
CG6148-PB 1605 Past1-RB 784..1602 837..19 4070 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:00:26
Subject Length Description Subject Range Query Range Score Percent Strand
Past1-RB 2679 CG6148-RB 1064..1882 837..19 4080 99.9 Minus
Past1-RA 1866 CG6148-RA 993..1811 837..19 4080 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:00:20
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12698894..12699337 837..394 2205 99.8 Minus
3R 32079331 3R 12703871..12704078 226..19 1025 99.5 Minus
3R 32079331 3R 12703638..12703812 396..222 875 100 Minus
Blast to na_te.dros performed 2015-02-10 23:00:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\Osvaldo 9045 Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). 3046..3134 618..531 109 59.6 Minus

BO14532.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:30:49 Download gff for BO14532.3prime
Subject Subject Range Query Range Percent Splice Strand
Past1-PB 783..1605 18..838 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:27:45 Download gff for BO14532.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6148-PB 783..1605 18..838 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:14:47 Download gff for BO14532.3prime
Subject Subject Range Query Range Percent Splice Strand
Past1-RA 992..1811 19..838 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:21:58 Download gff for BO14532.3prime
Subject Subject Range Query Range Percent Splice Strand
Past1-RA 992..1811 19..838 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:21:58 Download gff for BO14532.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 12698893..12699335 396..838 99 -> Minus
3R 12703639..12703812 222..395 100 -> Minus
3R 12703876..12704078 19..221 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:14:47 Download gff for BO14532.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8524615..8525057 396..838 99 -> Minus
arm_3R 8529361..8529534 222..395 100 -> Minus
arm_3R 8529598..8529800 19..221 100   Minus

BO14532.5prime Sequence

858 bp (788 high quality bases) assembled on 2006-05-29

> BO14532.5prime
GAAGTTATCAGTCGACATGCCACGCCCAGAAGCAGGCGACAGCTTTCTGA
AGCGCGAGAAGAACACCCAGGAGGTAGTGGAGAATGTGATCGGCGAGCTG
AAGAAGATCTATCGGAGCAAGTTGCTGCCGCTGGAGGAGCACTACCAGTT
CCACGACTTTCACTCGCCAAAGCTCGAGGATCCAGACTTCGATGCGAAGC
CCATGATCCTGCTGGTGGGCCAGTACTCCACGGGCAAGACGACCTTCATC
CGCTATCTGCTGGAACGCGACTTTCCGGGCATTAGAATTGGTCCGGAGCC
AACGACGGACCGCTTCATCGCCGTGATGTACGACGACAAGGAGGGTGTGA
TACCGGGCAACGCCCTGGTTGTGGACCCCAAGAAGCAGTTCCGGCCGCTG
TCCAAGTACGGCAACGCCTTCCTGAATCGCTTCCAATGCAGCAGTGTGGC
CTCGCCTGTGCTGAACGCCATCTCCATCGTAGACACGCCCGGAATTCTCT
CCGGCGAAAAGCAGCGCATCGACAGGGGCTACGACTTCACCGGCGTGCTG
GAGTGGTTCGCGGAGCGCGTGGACCGCATCATCCTGCTGTTCGACGCCCA
CAAACTGGACATCTCCGACGAGTTCCGGCGCTCGATCGAGGCGCTCAAGG
GACACGACGACAAGATCCGTATTATCCTGAACAAGGCCGACATGATTGAT
CACCAGCAGTTAATGCGGGTGTACGGAGCACTGATGTGGTCGCTGGGCAA
GGTGCTGCAGACGCCGGAGGTGGCTCGTGTCTACATCGGCTCCTTCTGGG
ACCAGCCGCTGCGCTTCGACGCCAACCGCCGACTGTTCGAGGACGAGGAA
CAGGATCT

BO14532.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:24:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG6148-PA 1623 Past1-RA 1..842 17..858 4085 99.4 Plus
CG6148-PB 1605 Past1-RB 7..824 41..858 3965 99.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:38:29
Subject Length Description Subject Range Query Range Score Percent Strand
Past1-RA 1866 CG6148-RA 192..1033 17..858 4135 99.4 Plus
Past1-RB 2679 CG6148-RB 287..1104 41..858 4015 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:38:22
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12698117..12698934 41..858 4015 99.4 Plus
Blast to na_te.dros performed on 2015-02-12 12:38:26 has no hits.

BO14532.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:30:51 Download gff for BO14532.5prime
Subject Subject Range Query Range Percent Splice Strand
Past1-PA 1..842 17..858 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:27:47 Download gff for BO14532.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6148-PA 1..842 17..858 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:11:08 Download gff for BO14532.5prime
Subject Subject Range Query Range Percent Splice Strand
Past1-RA 182..1033 7..858 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:12:48 Download gff for BO14532.5prime
Subject Subject Range Query Range Percent Splice Strand
Past1-RA 182..1033 7..858 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:12:48 Download gff for BO14532.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 12698119..12698934 43..858 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:11:08 Download gff for BO14532.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8523841..8524656 43..858 99   Plus

BO14532.complete Sequence

1654 bp assembled on 2007-06-22

GenBank Submission: FJ633171

> BO14532.complete
GAAGTTATCAGTCGACATGCCACGCCCAGAAGCAGGCGACAGCTTTCTGA
AGCGCGAGAAGAACACCCAGGAGGTAGTGGAGAATGTGATCGGCGAGCTG
AAGAAGATCTATCGGAGCAAGTTGCTGCCGCTGGAGGAGCACTACCAGTT
CCACGACTTTCACTCGCCAAAGCTCGAGGATCCAGACTTCGATGCGAAGC
CCATGATCCTGCTGGTGGGCCAGTACTCCACGGGCAAGACGACCTTCATC
CGCTATCTGCTGGAACGCGACTTTCCGGGCATTAGAATTGGTCCGGAGCC
AACGACGGACCGCTTCATCGCCGTGATGTACGACGACAAGGAGGGTGTGA
TACCGGGCAACGCCCTGGTTGTGGACCCCAAGAAGCAGTTCCGGCCGCTG
TCCAAGTACGGCAACGCCTTCCTGAATCGCTTCCAATGCAGCAGTGTGGC
CTCGCCTGTGCTGAACGCCATCTCCATCGTAGACACGCCCGGAATTCTCT
CCGGCGAAAAGCAGCGCATCGACAGGGGCTACGACTTCACCGGCGTGCTG
GAGTGGTTCGCGGAGCGCGTGGACCGCATCATCCTGCTGTTCGACGCCCA
CAAACTGGACATCTCCGACGAGTTCCGGCGCTCGATCGAGGCGCTCAAGG
GACACGACGACAAGATCCGTATTATCCTGAACAAGGCCGACATGATTGAT
CACCAGCAGTTAATGCGGGTGTACGGAGCACTGATGTGGTCGCTGGGCAA
GGTGCTGCAGACGCCGGAGGTGGCTCGTGTCTACATCGGCTCCTTCTGGG
ACCAGCCGCTGCGCTTCGACGCCAACCGCCGACTGTTCGAGGACGAGGAA
CAGGATCTGTTCAGGGATCTGCAGTCCCTGCCGCGTAACGCCGCCCTGCG
CAAGCTGAACGATCTGATCAAGCGGGCGCGCCTGGCCAAGGTGCATGCCT
TCATCATTGCCGAGCTGCGCAAGGACATGCCCTCTGTGTTCGGCAAGGAC
AGCAAGAAGAAGGACTTGATTAAGAACCTCGGCCAGGTATACGATCGCAT
CCAGCGCGAGCACTCCATTTCTCCCGGCGACTTCCCCGACATCAAGAAGA
TGCAGGAGGTCCTGCAGCACCAGGACTTCACCAAGTTCCACTCCCTCAAG
CCCCATCTGCTGGACATCGTGGACAACATGCTGGCCAAGGACATTGCCCG
CCTGATGGAGATGATTCCCCAGGAGGAGATGACCATGGTCGCGGACCCAA
TCGTCAAGGGTGGTGCCTTCGAGGGAGTCATCGACGACCATGTCTCACCA
TTCGGCTACATGAAGGGCGAGGGCATCGATGCCGGCTACGGAGAGCACGA
GTGGATCTGCAACAAGGACAAGCCGCGCACAGATGGCATCTTCAATGGGC
TGGGACCAGTCGATGGCAAGATATCCGGTGCAACTGCCAAGCAGGAACTC
ATCAAATCGAAACTGCCCAACTCGGTGCTCAGCAAGATCTGGAAACTGTC
GGACGTCGACGGCGATGGGTTCCTGGACTCTGACGAGTTCGCGCTGGCCT
TGCACTTAATCAACGTCAAGCTGGAAGGCTGCGAGCTGCCCACCGTGCTG
CCGGAGCACTTAGTACCGCCGTCGAAGCGCTATGACGCAAGCTTTCTAGA
CCAT

BO14532.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:08:32
Subject Length Description Subject Range Query Range Score Percent Strand
Past1-RA 1623 CG6148-PA 1..1620 17..1636 8025 99.7 Plus
Past1-RB 1605 CG6148-PB 7..1602 41..1636 7905 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:08:34
Subject Length Description Subject Range Query Range Score Percent Strand
Past1-RA 1866 CG6148-RA 192..1811 17..1636 8025 99.7 Plus
Past1-RB 2679 CG6148-RB 287..1882 41..1636 7905 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:08:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12698117..12699337 41..1261 6030 99.6 Plus
3R 32079331 3R 12703871..12704078 1429..1636 1025 99.5 Plus
3R 32079331 3R 12703638..12703812 1259..1433 875 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:08:31 has no hits.

BO14532.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:07:53 Download gff for BO14532.complete
Subject Subject Range Query Range Percent Splice Strand
Past1-RA 1..1623 17..1637 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:24:16 Download gff for BO14532.complete
Subject Subject Range Query Range Percent Splice Strand
Past1-RA 182..1811 7..1636 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:46:17 Download gff for BO14532.complete
Subject Subject Range Query Range Percent Splice Strand
Past1-RA 192..1811 17..1638 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:07:54 Download gff for BO14532.complete
Subject Subject Range Query Range Percent Splice Strand
Past1-RA 182..1811 7..1636 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:15:07 Download gff for BO14532.complete
Subject Subject Range Query Range Percent Splice Strand
Past1-RA 192..1811 17..1638 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:15:07 Download gff for BO14532.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12697513..12697538 17..42 100 -> Plus
3R 12698119..12699335 43..1259 99 -> Plus
3R 12703639..12703812 1260..1433 100 -> Plus
3R 12703876..12704078 1434..1638 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:46:17 Download gff for BO14532.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8523235..8523260 17..42 100 -> Plus
arm_3R 8523841..8525057 43..1259 99 -> Plus
arm_3R 8529361..8529534 1260..1433 100 -> Plus
arm_3R 8529598..8529800 1434..1638 99   Plus

BO14532.pep Sequence

Translation from 16 to 1654

> BO14532.pep
MPRPEAGDSFLKREKNTQEVVENVIGELKKIYRSKLLPLEEHYQFHDFHS
PKLEDPDFDAKPMILLVGQYSTGKTTFIRYLLERDFPGIRIGPEPTTDRF
IAVMYDDKEGVIPGNALVVDPKKQFRPLSKYGNAFLNRFQCSSVASPVLN
AISIVDTPGILSGEKQRIDRGYDFTGVLEWFAERVDRIILLFDAHKLDIS
DEFRRSIEALKGHDDKIRIILNKADMIDHQQLMRVYGALMWSLGKVLQTP
EVARVYIGSFWDQPLRFDANRRLFEDEEQDLFRDLQSLPRNAALRKLNDL
IKRARLAKVHAFIIAELRKDMPSVFGKDSKKKDLIKNLGQVYDRIQREHS
ISPGDFPDIKKMQEVLQHQDFTKFHSLKPHLLDIVDNMLAKDIARLMEMI
PQEEMTMVADPIVKGGAFEGVIDDHVSPFGYMKGEGIDAGYGEHEWICNK
DKPRTDGIFNGLGPVDGKISGATAKQELIKSKLPNSVLSKIWKLSDVDGD
GFLDSDEFALALHLINVKLEGCELPTVLPEHLVPPSKRYDASFLDH

BO14532.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:10:05
Subject Length Description Subject Range Query Range Score Percent Strand
Past1-PA 540 CG6148-PA 1..540 1..540 2820 100 Plus
Past1-PB 534 CG6148-PB 3..534 9..540 2775 100 Plus
CG9297-PA 930 CG9297-PA 497..872 8..378 463 29.3 Plus
CG9297-PE 952 CG9297-PE 519..894 8..378 463 29.3 Plus
CG9297-PD 952 CG9297-PD 519..894 8..378 463 29.3 Plus