Clone Sequence Records
BO14557.5prime Sequence
368 bp (367 high quality bases) assembled on 2006-05-29
> BO14557.5prime
GAAGTTATCAGTCGACATGGTGTGGAATACGCTTTCCTTCTGGGACGGTC
AACCAGTCACTTCCCCGGTATATCCCCGGATGGGGGATATGTGGAACCCC
AATACCGCCGGCTACCAGAATTACCAACACCCTCAGAACCATTCGCATAG
CAATTACTTTCAACGGATGGGCATGGGTGACATTCGCCAGATGAGCTGTC
CCATGCCGAACTACTGTCCTCAATTCCGGGAGCCCGGATTGGACGATGTG
GATGCCTTTTACGCTTACAACGGCATGGATATAACTCAGGCCTACGGCGG
TGGATCTGGAGCTGGTCACGGAGCAGGATCTGGAGCGCGGGGCGACTTTT
GGGCAAGCTTTCTAGACC
BO14557.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:24:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11106-PA | 339 | CG11106-RA | 1..336 | 17..352 | 1680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:22:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11106-RB | 511 | CG11106-RB | 86..422 | 16..352 | 1685 | 100 | Plus |
CG11106-RA | 559 | CG11106-RA | 134..470 | 16..352 | 1685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:21:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11202381..11202717 | 16..352 | 1685 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 01:22:03 has no hits.
BO14557.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:31:36 Download gff for
BO14557.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11106-PA | 1..339 | 17..353 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:28:57 Download gff for
BO14557.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11106-PA | 1..339 | 17..353 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 08:45:46 Download gff for
BO14557.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11106-RA | 129..470 | 10..352 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:08:49 Download gff for
BO14557.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11106-RA | 129..470 | 10..352 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:08:49 Download gff for
BO14557.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11202376..11202717 | 10..352 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 08:45:46 Download gff for
BO14557.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11096409..11096750 | 10..352 | 99 | | Plus |
BO14557.3prime Sequence
368 bp (367 high quality bases) assembled on 2006-05-29
> BO14557.3prime
ATGGTCTAGAAAGCTTGCCCAAAAGTCGCCCCGCGCTCCAGATCCTGCTC
CGTGACCAGCTCCAGATCCACCGCCGTAGGCCTGAGTTATATCCATGCCG
TTGTAAGCGTAAAAGGCATCCACATCGTCCAATCCGGGCTCCCGGAATTG
AGGACAGTAGTTCGGCATGGGACAGCTCATCTGGCGAATGTCACCCATGC
CCATCCGTTGAAAGTAATTGCTATGCGAATGGTTCTGAGGGTGTTGGTAA
TTCTGGTAGCCGGCGGTATTGGGGTTCCACATATCCCCCATCCGGGGATA
TACCGGGGAAGTGACTGGTTGACCGTCCCAGAAGGAAAGCGTATTCCACA
CCATGTCGACTGATAACT
BO14557.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:24:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11106-PA | 339 | CG11106-RA | 1..336 | 354..19 | 1680 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:16:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11106-RB | 511 | CG11106-RB | 86..422 | 355..19 | 1685 | 100 | Minus |
CG11106-RA | 559 | CG11106-RA | 134..470 | 355..19 | 1685 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:16:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11202381..11202717 | 355..19 | 1685 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 18:16:47 has no hits.
BO14557.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:31:35 Download gff for
BO14557.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11106-PA | 1..339 | 18..354 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:28:55 Download gff for
BO14557.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11106-PA | 1..339 | 18..354 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:31:22 Download gff for
BO14557.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11106-RA | 129..470 | 19..361 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:49:39 Download gff for
BO14557.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11106-RA | 129..470 | 19..361 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:49:39 Download gff for
BO14557.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11202376..11202717 | 19..361 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:31:22 Download gff for
BO14557.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11096409..11096750 | 19..361 | 99 | | Minus |
BO14557.complete Sequence
370 bp assembled on 2006-10-11
GenBank Submission: FJ633178
> BO14557.complete
GAAGTTATCAGTCGACATGGTGTGGAATACGCTTTCCTTCTGGGACGGTC
AACCAGTCACTTCCCCGGTATATCCCCGGATGGGGGATATGTGGAACCCC
AATACCGCCGGCTACCAGAATTACCAACACCCTCAGAACCATTCGCATAG
CAATTACTTTCAACGGATGGGCATGGGTGACATTCGCCAGATGAGCTGTC
CCATGCCGAACTACTGTCCTCAATTCCGGGAGCCCGGATTGGACGATGTG
GATGCCTTTTACGCTTACAACGGCATGGATATAACTCAGGCCTACGGCGG
TGGATCTGGAGCTGGTCACGGAGCAGGATCTGGAGCGCGGGGCGACTTTT
GGGCAAGCTTTCTAGACCAT
BO14557.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:26:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11106-RB | 339 | CG11106-PB | 1..336 | 17..352 | 1680 | 100 | Plus |
CG11106-RA | 339 | CG11106-PA | 1..336 | 17..352 | 1680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:26:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11106-RB | 511 | CG11106-RB | 86..422 | 16..352 | 1685 | 100 | Plus |
CG11106-RA | 559 | CG11106-RA | 134..470 | 16..352 | 1685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:26:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11202381..11202717 | 16..352 | 1685 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:26:09 has no hits.
BO14557.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:05:48 Download gff for
BO14557.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11106-RA | 1..339 | 17..353 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:20:54 Download gff for
BO14557.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11106-RA | 108..449 | 10..352 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:58:54 Download gff for
BO14557.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11106-RA | 135..470 | 17..354 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:05:48 Download gff for
BO14557.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11106-RA | 108..449 | 10..352 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:18:38 Download gff for
BO14557.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11106-RA | 135..470 | 17..354 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:18:38 Download gff for
BO14557.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11202382..11202717 | 17..354 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:58:54 Download gff for
BO14557.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11096415..11096750 | 17..354 | 99 | | Plus |
BO14557.pep Sequence
Translation from 16 to 370
> BO14557.pep
MVWNTLSFWDGQPVTSPVYPRMGDMWNPNTAGYQNYQHPQNHSHSNYFQR
MGMGDIRQMSCPMPNYCPQFREPGLDDVDAFYAYNGMDITQAYGGGSGAG
HGAGSGARGDFWASFLDH
BO14557.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:48:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11106-PB | 112 | CG11106-PB | 1..112 | 1..112 | 653 | 100 | Plus |
CG11106-PA | 112 | CG11106-PA | 1..112 | 1..112 | 653 | 100 | Plus |
CG15200-PA | 113 | CG15200-PA | 3..113 | 4..112 | 139 | 31.5 | Plus |