Clone BO14561 Report

Search the DGRC for BO14561

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:145
Well:61
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO14561.pep: validated full length
Sequenced Size:595

Clone Sequence Records

BO14561.3prime Sequence

593 bp (592 high quality bases) assembled on 2006-05-29

> BO14561.3prime
ATGGACTAGAAAGCTTGCCAACAAAATACGATGGAATTCGGGCTCATCCA
CTCCGCACAATGGGCATACCCTGCCAGTGTCGACAGCTCTCTTAATGCAC
GCTTTGCAGAAAACGTGGCCACAATTGGTGGACACTGGTAGCTTCTCGCG
GACATCTTCCAGGCACACAGGGCAGTTGTAGGGCAAGACAGATTTCTTGG
ACTCCTCGTCATCTGATTTGATCCGTTTGTTGGGAGGAGAATCCTCGTTT
GAATCTGAAGATTCTGTATGTCCCATTGGTGTTGATGATTCGGTGGAGCT
CATACTGCTATCGAAGCTAATGCTGGTCGATGAGCTTTCACTATCACTGG
AACTAGACGACTCTGAGTCGCTGGAATACTCCAACAGGAATGGGGTTCTG
TCGATAGATCTGCTGCTGCTTGAGGAGTCCGAGTCTCCGTAATACTCATT
TGGATTCCGCTCATAGGAACCGCTGAGTAAGCGGGATCTTAATCCGGAGG
GCGCGAGTACGGGAGTGGGCCCGGTGTTATGGATTCGCTGTGATACTCCA
GAATTATTCGAGGTCCTGAAGTTTTCCATGTCGACTGATAACT

BO14561.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:24:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG15150-PA 564 elfless-RA 1..557 579..23 2735 99.6 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:39:21
Subject Length Description Subject Range Query Range Score Percent Strand
elfless-RC 1376 CG15150-RC 226..786 579..19 2760 99.5 Minus
elfless-RB 1643 CG15150-RB 226..786 579..19 2760 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:39:20
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18010500..18010866 19..385 1805 99.5 Plus
2L 23513712 2L 18011080..18011194 465..579 575 100 Plus
2L 23513712 2L 18010934..18011011 385..462 390 100 Plus
Blast to na_te.dros performed on 2015-02-10 18:39:21 has no hits.

BO14561.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:31:43 Download gff for BO14561.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15150-PA 1..564 15..579 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:29:07 Download gff for BO14561.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15150-PA 1..564 15..579 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:50:58 Download gff for BO14561.3prime
Subject Subject Range Query Range Percent Splice Strand
elfless-RB 222..790 14..584 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:56:11 Download gff for BO14561.3prime
Subject Subject Range Query Range Percent Splice Strand
elfless-RB 222..790 14..584 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 20:56:11 Download gff for BO14561.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 18010496..18010865 14..384 98 <- Plus
2L 18010934..18011011 385..462 100 <- Plus
2L 18011078..18011198 463..584 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:50:58 Download gff for BO14561.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18010496..18010865 14..384 98 <- Plus
arm_2L 18010934..18011011 385..462 100 <- Plus
arm_2L 18011078..18011198 463..584 97   Plus

BO14561.5prime Sequence

593 bp (592 high quality bases) assembled on 2006-05-29

> BO14561.5prime
GAAGTTATCAGTCGACATGGAAAACTTCAGGACCTCGAATAATTCTGGAG
TATCACAGCGAATCCATAACACCGGGCCCACTCCCGTACTCGCGCCCTCC
GGATTAAGATCCCGCTTACTCAGCGGTTCCTCTGAGCGGAATCCAAATGA
GTATTACGGAGACTCGGACTCCTCAAGCAGCAGCAGATCTATCGACAGAA
CCCCATTCCTGTTGGAGTATTCCAGCGACTCAGAGTCGTCTAGTTCCAGT
GATAGTGAAAGCTCATCGACCAGCATTAGCTTCGATAGCAGTATGAGCTC
CACCGAATCATCAACACCAATGGGACATACAGAATCCTCAGATTCAAACG
AGGATTCTCCTCCCAACAAACGGATCAAATCAGATGACGAGGAGTCCAAG
AAATCTGTCTTGCCCTACAACTGCCCTGTGTGCCTGGAAGATGTCCGCGA
GAAGCTACCAGTGTCCACCAATTGTGGCCACGTTTTCTGCAAAGCGTGCA
TTAAGAGAGCTGTCGACACTGGCAGGGTATGCCCATTGTGCGGAGTGGAT
GAGCCCGAATTCCATCGTATTTTCTTGGCAAGCTTTCTAGACC

BO14561.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:24:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG15150-PA 564 elfless-RA 1..561 17..577 2805 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 02:07:45
Subject Length Description Subject Range Query Range Score Percent Strand
elfless-RC 1376 CG15150-RC 226..786 17..577 2805 100 Plus
elfless-RB 1643 CG15150-RB 226..786 17..577 2805 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 02:07:37
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18010500..18010866 577..211 1835 100 Minus
2L 23513712 2L 18011077..18011194 134..17 590 100 Minus
2L 23513712 2L 18010934..18011011 211..134 390 100 Minus
Blast to na_te.dros performed on 2015-02-04 02:07:41 has no hits.

BO14561.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:31:44 Download gff for BO14561.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15150-PA 1..564 17..581 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:29:08 Download gff for BO14561.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15150-PA 1..564 17..581 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 20:42:50 Download gff for BO14561.5prime
Subject Subject Range Query Range Percent Splice Strand
elfless-RB 222..790 12..582 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:20:06 Download gff for BO14561.5prime
Subject Subject Range Query Range Percent Splice Strand
elfless-RB 222..790 12..582 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:20:06 Download gff for BO14561.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 18010496..18010865 212..582 99 <- Minus
2L 18010934..18011011 134..211 100 <- Minus
2L 18011078..18011198 12..133 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 20:42:50 Download gff for BO14561.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18010496..18010865 212..582 99 <- Minus
arm_2L 18010934..18011011 134..211 100 <- Minus
arm_2L 18011078..18011198 12..133 98   Minus

BO14561.complete Sequence

595 bp assembled on 2006-10-11

GenBank Submission: FJ633179

> BO14561.complete
GAAGTTATCAGTCGACATGGAAAACTTCAGGACCTCGAATAATTCTGGAG
TATCACAGCGAATCCATAACACCGGGCCCACTCCCGTACTCGCGCCCTCC
GGATTAAGATCCCGCTTACTCAGCGGTTCCTCTGAGCGGAATCCAAATGA
GTATTACGGAGACTCGGACTCCTCAAGCAGCAGCAGATCTATCGACAGAA
CCCCATTCCTGTTGGAGTATTCCAGCGACTCAGAGTCGTCTAGTTCCAGT
GATAGTGAAAGCTCATCGACCAGCATTAGCTTCGATAGCAGTATGAGCTC
CACCGAATCATCAACACCAATGGGACATACAGAATCCTCAGATTCAAACG
AGGATTCTCCTCCCAACAAACGGATCAAATCAGATGACGAGGAGTCCAAG
AAATCTGTCTTGCCCTACAACTGCCCTGTGTGCCTGGAAGATGTCCGCGA
GAAGCTACCAGTGTCCACCAATTGTGGCCACGTTTTCTGCAAAGCGTGCA
TTAAGAGAGCTGTCGACACTGGCAGGGTATGCCCATTGTGCGGAGTGGAT
GAGCCCGAATTCCATCGTATTTTCTTGGCAAGCTTTCTAGACCAT

BO14561.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:13:46
Subject Length Description Subject Range Query Range Score Percent Strand
elfless-RC 690 CG15150-PC 127..687 17..577 2805 100 Plus
elfless-RB 690 CG15150-PB 127..687 17..577 2805 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:13:47
Subject Length Description Subject Range Query Range Score Percent Strand
elfless-RC 1376 CG15150-RC 226..786 17..577 2805 100 Plus
elfless-RB 1643 CG15150-RB 226..786 17..577 2805 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:13:44
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18010500..18010866 577..211 1835 100 Minus
2L 23513712 2L 18011077..18011194 134..17 590 100 Minus
2L 23513712 2L 18010934..18011011 211..134 390 100 Minus
Blast to na_te.dros performed on 2014-11-28 00:13:45 has no hits.

BO14561.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:53:58 Download gff for BO14561.complete
Subject Subject Range Query Range Percent Splice Strand
elfless-RA 1..564 17..581 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:04:40 Download gff for BO14561.complete
Subject Subject Range Query Range Percent Splice Strand
elfless-RA 12..580 12..582 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:20:23 Download gff for BO14561.complete
Subject Subject Range Query Range Percent Splice Strand
elfless-RB 226..786 17..579 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:28:16 Download gff for BO14561.complete
Subject Subject Range Query Range Percent Splice Strand
elfless-RB 226..786 17..579 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:28:16 Download gff for BO14561.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18010498..18010865 212..579 99 <- Minus
2L 18010934..18011011 134..211 100 <- Minus
2L 18011078..18011194 17..133 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:20:23 Download gff for BO14561.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18010498..18010865 212..579 99 <- Minus
arm_2L 18010934..18011011 134..211 100 <- Minus
arm_2L 18011078..18011194 17..133 100   Minus

BO14561.pep Sequence

Translation from 16 to 595

> BO14561.pep
MENFRTSNNSGVSQRIHNTGPTPVLAPSGLRSRLLSGSSERNPNEYYGDS
DSSSSSRSIDRTPFLLEYSSDSESSSSSDSESSSTSISFDSSMSSTESST
PMGHTESSDSNEDSPPNKRIKSDDEESKKSVLPYNCPVCLEDVREKLPVS
TNCGHVFCKACIKRAVDTGRVCPLCGVDEPEFHRIFLASFLDH

BO14561.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:45:18
Subject Length Description Subject Range Query Range Score Percent Strand
elfless-PC 229 CG15150-PC 43..229 1..187 974 100 Plus
elfless-PB 229 CG15150-PB 43..229 1..187 974 100 Plus
dgrn-PD 205 CG10981-PD 127..205 109..187 182 44.4 Plus
dgrn-PB 312 CG10981-PB 234..312 109..187 182 44.4 Plus
dgrn-PA 319 CG10981-PA 241..319 109..187 182 44.4 Plus