Clone BO14572 Report

Search the DGRC for BO14572

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:145
Well:72
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO14572.pep: validated full length
Sequenced Size:1411

Clone Sequence Records

BO14572.3prime Sequence

945 bp (806 high quality bases) assembled on 2006-05-29

> BO14572.3prime
ATGGTCTAGAAAGCTTGCGAGCACCATGGTGCGGAACAAGATGGTGAATC
CAGCGATTGTGCAGAACATGAAAAGCGTCAGGATACTTCCGCCCAGCAGA
AATTGAAAAGGTCTGACATTGCCCCAGCCGGCGACAATTGTGTTGGCCGG
GCTGCTCACGGGCAGCAAAAACTGATTGTGCAACGCGGTGGCAAATGGCA
GTGAAAAGGAATTACCCGCGGTTACCATGGTGGGCAATGCCAACTTGGCC
ACGGTGGTGGCCGGCGACAGCGTGGTCCAAAGTGTTCCAAGCAAGGCGCC
GCAGATGAAGCTCTTCATATTGAATCCCTTGTTATCGGAGTTCATCGAAT
CCGCCAAGTAGGTGTTCAATCCACAAACAGCGGAACTATAGCTAAAGCTG
AAGGCGGCGCCCAGCATAAAGATTTCCGCCCAGGGAGTATTGTTGTTGAC
CGCCTTCCAGCCCAGAAGTGAATTGGCAGGACCCTCTTTCTCCGGCTGGC
GGCAAACATAGTATCTGCAGAATATATAGTTGGCCGGAATTGCGAAGAAG
AGAATGGACATGCCAATGCCGGCCACTGAGAGACCAGATTCCGCCTTATA
GTTTATACTATCCCAGCCCGTAAAGATGCGCGGCTTGCGAGTGGCCACCA
GCAGGAACATCAATAGAATCAAGCTCAAGGCCAAGATGGGATATATTCCC
CAGGGACCAAGAGCCTGTTTTCTTTCAGACGCGGTCTGTTTAAAGCCCGC
CTTAGCCCCAGCCATTTCCGCCAGATCGCGCTTCACACTGCCTCCAAGGA
GACCGAGGAAGAGGACTTGCAACCAGAAGATCATGACAACGAGACCCATT
AGAGCTGGTCCCGCCATTAGCATGCCAATTTTCAGAACTGTAAGAGACCC
CCCCAAAACATCGCTTATCACACCATTGGGATTGACAATGGGGCG

BO14572.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:24:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG7309-PA 1380 CG7309-RA 454..1377 942..19 4495 99.4 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:56:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG7309-RC 2093 CG7309-RC 742..1665 942..19 4545 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:56:50
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10907080..10907763 216..899 3390 99.7 Plus
2L 23513712 2L 10906847..10906964 100..217 590 100 Plus
2L 23513712 2L 10906698..10906778 19..99 405 100 Plus
2L 23513712 2L 10907826..10907871 897..942 185 93.5 Plus
Blast to na_te.dros performed on 2015-01-31 10:56:54 has no hits.

BO14572.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:32:03 Download gff for BO14572.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7309-PA 452..1380 16..945 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:29:34 Download gff for BO14572.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7309-PA 452..1380 16..945 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:44:50 Download gff for BO14572.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7309-RC 740..1671 11..945 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:52:11 Download gff for BO14572.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7309-RC 740..1671 11..945 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:52:11 Download gff for BO14572.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 10906692..10906778 11..99 95 <- Plus
2L 10906847..10906963 100..216 100 <- Plus
2L 10907081..10907762 217..898 99 <- Plus
2L 10907828..10907873 899..945 91   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:44:50 Download gff for BO14572.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10906692..10906778 11..99 95 <- Plus
arm_2L 10906847..10906963 100..216 100 <- Plus
arm_2L 10907081..10907762 217..898 99 <- Plus
arm_2L 10907828..10907873 899..945 91   Plus

BO14572.5prime Sequence

840 bp (797 high quality bases) assembled on 2006-05-29

> BO14572.5prime
GAAGTTATCAGTCGACATGGCCAGAGGAGCTGCCGCCTTCATCTATATGG
TTTTCATACCCGTTGCAGGCATTGCGAGCTCTAAAGAGATCAGTGTGTCG
TACTACACTGATCTCATATTTTTCGTTTATTCCGCTATATTCATGGGCAT
CATGATGGACAGTTCGAAATTGAGTGACCGCTTGGCTTTTATTGTCATCT
CCTTGGTCGGTGGAAGTTTGAAATTTCTTCAGATTTTCTTGACCATCGCC
GCGGCCATTGTGTCCATTTTGGTGAATCCCACAATATCCGCTGCTTTTTG
GATGAAGGTGTCCCAAGCCGTGATGGTGGAATACGATAATGGTGGTTTGA
TAAAATTAAACTCTGAAGAGAAGCCCTATGAAATTGGATCCAAACCATAT
CCCACGCGTCCTGTAATCGGAATATACCTAACCTGTTGCTACGCAGCCTC
TTTGGCAGCAAGTCTTTCGCCCATCGTCAATCCCAATGGTGTGATAAGCG
ATGGTTTTGGGGGGTCTCTTACAGTTCTGGAAATTGGCATGCTAATGGCG
GGACCAGCTCTAATGGGTCTCGTTGTCATGATCTTCTGGTTGCAAGTCCT
CTTCCTCGGTCTCCTTGGAGGCAGTGTGAAGCGCGATCTGGCGGAAATGG
CTGGGGCTAAGGCGGGCTTTAAACAGACCGCGTCTGAAAGAAAACAGGCT
CTTGGTCCCTGGGGAATATATCCCATCTTGGCCTTGAGCTTGATTCTATT
GATGTTCCTGCTGGTGGCCACTCGCAAGCCGCGCATCTTTACGGGCTGGG
ATAGTATAAACTATAAGGCGGAATCTGGTCTCTCAGTGGC

BO14572.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:24:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG7309-PA 1380 CG7309-RA 1..824 17..840 4120 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:30:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG7309-RC 2093 CG7309-RC 289..1112 17..840 4120 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:30:07
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10907436..10907763 840..513 1640 100 Minus
2L 23513712 2L 10908282..10908490 225..17 1045 100 Minus
2L 23513712 2L 10907826..10907950 515..391 625 100 Minus
2L 23513712 2L 10908114..10908229 341..226 580 100 Minus
2L 23513712 2L 10908013..10908062 390..341 250 100 Minus
Blast to na_te.dros performed 2015-02-12 05:30:09
Subject Length Description Subject Range Query Range Score Percent Strand
ZAM 8435 ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). 7412..7471 318..259 110 68.9 Minus

BO14572.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:32:04 Download gff for BO14572.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7309-PA 1..824 17..840 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:29:36 Download gff for BO14572.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7309-PA 1..824 17..840 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 02:57:10 Download gff for BO14572.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7309-RC 289..1112 17..840 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:34:36 Download gff for BO14572.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7309-RC 289..1112 17..840 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:34:36 Download gff for BO14572.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 10907436..10907762 514..840 100 <- Minus
2L 10907828..10907950 391..513 100 <- Minus
2L 10908013..10908062 341..390 100 <- Minus
2L 10908115..10908229 226..340 100 <- Minus
2L 10908282..10908490 17..225 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 02:57:10 Download gff for BO14572.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10907436..10907762 514..840 100 <- Minus
arm_2L 10907828..10907950 391..513 100 <- Minus
arm_2L 10908013..10908062 341..390 100 <- Minus
arm_2L 10908115..10908229 226..340 100 <- Minus
arm_2L 10908282..10908490 17..225 100   Minus

BO14572.complete Sequence

1411 bp assembled on 2006-10-11

GenBank Submission: FJ633182

> BO14572.complete
GAAGTTATCAGTCGACATGGCCAGAGGAGCTGCCGCCTTCATCTATATGG
TTTTCATACCCGTTGCAGGCATTGCGAGCTCTAAAGAGATCAGTGTGTCG
TACTACACTGATCTCATATTTTTCGTTTATTCCGCTATATTCATGGGCAT
CATGATGGACAGTTCGAAATTGAGTGACCGCTTGGCTTTTATTGTCATCT
CCTTGGTCGGTGGAAGTTTGAAATTTCTTCAGATTTTCTTGACCATCGCC
GCGGCCATTGTGTCCATTTTGGTGAATCCCACAATATCCGCTGCTTTTTG
GATGAAGGTGTCCCAAGCCGTGATGGTGGAATACGATAATGGTGGTTTGA
TAAAATTAAACTCTGAAGAGAAGCCCTATGAAATTGGATCCAAACCATAT
CCCACGCGTCCTGTAATCGGAATATACCTAACCTGTTGCTACGCAGCCTC
TTTGGCAGCAAGTCTTTCGCCCATCGTCAATCCCAATGGTGTGATAAGCG
ATGGTTTTGGGGGGTCTCTTACAGTTCTGGAAATTGGCATGCTAATGGCG
GGACCAGCTCTAATGGGTCTCGTTGTCATGATCTTCTGGTTGCAAGTCCT
CTTCCTCGGTCTCCTTGGAGGCAGTGTGAAGCGCGATCTGGCGGAAATGG
CTGGGGCTAAGGCGGGCTTTAAACAGACCGCGTCTGAAAGAAAACAGGCT
CTTGGTCCCTGGGGAATATATCCCATCTTGGCCTTGAGCTTGATTCTATT
GATGTTCCTGCTGGTGGCCACTCGCAAGCCGCGCATCTTTACGGGCTGGG
ATAGTATAAACTATAAGGCGGAATCTGGTCTCTCAGTGGCCGGCATTGGC
ATGTCCATTCTCTTCTTCGCAATTCCGGCCAACTATATATTCTGCAGATA
CTATGTTTGCCGCCAGCCGGAGAAAGAGGGTCCTGCCAATTCACTTCTGG
GCTGGAAGGCGGTCAACAACAATACTCCCTGGGCGGAAATCTTTATGCTG
GGCGCCGCCTTCAGCTTTAGCTATAGTTCCGCTGTTTGTGGATTGAACAC
CTACTTGGCGGATTCGATGAACTCCGATAACAAGGGATTCAATATGAAGA
GCTTCATCTGCGGCGCCTTGCTTGGAACACTTTGGACCACGCTGTCGCCG
GCCACCACCGTGGCCAAGTTGGCATTGCCCACCATGGTAACCGCGGGTAA
TTCCTTTTCACTGCCATTTGCCACCGCGTTGCACAATCAGTTTTTGCTGC
CCGTGAGCAGCCCGGCCAACACAATTGTCGCCGGCTGGGGCAATGTCAGA
CCTTTTCAATTTCTGCTGGGCGGAAGTATCCTGACGCTTTTCATGTTCTG
CACAATCGCTGGATTCACCATCTTGTTCCGCACCATGGTGCTCGCAAGCT
TTCTAGACCAT

BO14572.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:04:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG7309-RC 1587 CG7309-PC 208..1584 17..1393 6870 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:04:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG7309-RC 2093 CG7309-RC 289..1665 17..1393 6870 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:03:59
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10907080..10907763 1196..513 3405 99.9 Minus
2L 23513712 2L 10908282..10908490 225..17 1045 100 Minus
2L 23513712 2L 10907826..10907950 515..391 625 100 Minus
2L 23513712 2L 10906847..10906964 1312..1195 590 100 Minus
2L 23513712 2L 10908114..10908229 341..226 580 100 Minus
2L 23513712 2L 10906698..10906778 1393..1313 405 100 Minus
2L 23513712 2L 10908013..10908062 390..341 250 100 Minus
Blast to na_te.dros performed on 2014-11-27 07:04:00 has no hits.

BO14572.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:34:22 Download gff for BO14572.complete
Subject Subject Range Query Range Percent Splice Strand
CG7309-RB 205..1584 17..1396 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:50:39 Download gff for BO14572.complete
Subject Subject Range Query Range Percent Splice Strand
CG7309-RB 206..1588 17..1401 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:04:00 Download gff for BO14572.complete
Subject Subject Range Query Range Percent Splice Strand
CG7309-RC 289..1665 17..1395 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:34:23 Download gff for BO14572.complete
Subject Subject Range Query Range Percent Splice Strand
CG7309-RB 206..1588 17..1401 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:02:06 Download gff for BO14572.complete
Subject Subject Range Query Range Percent Splice Strand
CG7309-RC 289..1665 17..1395 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:02:06 Download gff for BO14572.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10906847..10906963 1196..1312 100 <- Minus
2L 10906695..10906778 1313..1395 97 <- Minus
2L 10907081..10907762 514..1195 99 <- Minus
2L 10907828..10907950 391..513 100 <- Minus
2L 10908013..10908062 341..390 100 <- Minus
2L 10908115..10908229 226..340 100 <- Minus
2L 10908282..10908490 17..225 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:04:00 Download gff for BO14572.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10906695..10906778 1313..1395 97 <- Minus
arm_2L 10906847..10906963 1196..1312 100 <- Minus
arm_2L 10907081..10907762 514..1195 99 <- Minus
arm_2L 10907828..10907950 391..513 100 <- Minus
arm_2L 10908013..10908062 341..390 100 <- Minus
arm_2L 10908115..10908229 226..340 100 <- Minus
arm_2L 10908282..10908490 17..225 100   Minus

BO14572.pep Sequence

Translation from 16 to 1411

> BO14572.pep
MARGAAAFIYMVFIPVAGIASSKEISVSYYTDLIFFVYSAIFMGIMMDSS
KLSDRLAFIVISLVGGSLKFLQIFLTIAAAIVSILVNPTISAAFWMKVSQ
AVMVEYDNGGLIKLNSEEKPYEIGSKPYPTRPVIGIYLTCCYAASLAASL
SPIVNPNGVISDGFGGSLTVLEIGMLMAGPALMGLVVMIFWLQVLFLGLL
GGSVKRDLAEMAGAKAGFKQTASERKQALGPWGIYPILALSLILLMFLLV
ATRKPRIFTGWDSINYKAESGLSVAGIGMSILFFAIPANYIFCRYYVCRQ
PEKEGPANSLLGWKAVNNNTPWAEIFMLGAAFSFSYSSAVCGLNTYLADS
MNSDNKGFNMKSFICGALLGTLWTTLSPATTVAKLALPTMVTAGNSFSLP
FATALHNQFLLPVSSPANTIVAGWGNVRPFQFLLGGSILTLFMFCTIAGF
TILFRTMVLASFLDH

BO14572.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:58:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG7309-PC 528 CG7309-PC 70..528 1..459 2338 100 Plus
Indy-PD 572 CG3979-PD 71..548 7..452 431 26.8 Plus
Indy-PA 572 CG3979-PA 71..548 7..452 431 26.8 Plus
Indy-PC 572 CG3979-PC 71..548 7..452 431 26.8 Plus
Indy-PB 590 CG3979-PB 89..566 7..452 431 26.8 Plus