Clone BO14586 Report

Search the DGRC for BO14586

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:145
Well:86
Vector:pDNR-Dual
Associated Gene/Transcriptsan-RA
Protein status:BO14586.pep: validated full length
Sequenced Size:586

Clone Sequence Records

BO14586.5prime Sequence

584 bp (583 high quality bases) assembled on 2006-05-29

> BO14586.5prime
GAAGTTATCAGTCGACATGACTAGGAGCAGCATCGAACTGGGCGACGTGA
CGCCCCACAACATCAAGCAGCTAAAGAAGCTCAACACCGTGGTTTTCCCG
GTCTCCTACAATGACAAGTTTTACGTGGACGTCCTGGAGGCCGGCGAACT
GGCCAAATTGGCCTACTACAACGACATTGTAGTGGGCGCCGTCTGCTGTC
GCATCGACAACACTGAGAACCAGCGGCGCCTGTATATCATGACCCTAGGA
TGCCTCTCCCCGTACCGGCGCCTGGGCATCGGCACAGTTATGTTCGAGCA
CATTATGAACTTCGCCGAGAAGGACGGAAACTTCGACAGCATTTTTCTAC
ATGTGCAAATCAACAACAACGGAGCCATCGAGTTCTATAAGAAGTTTGGT
TTCGAGATTGTTGACACCAAGGAGCAATACTATAAGCGCATCGAGCCGGC
GGACGCTCATGTACTGCAAAAGACTCTGCGCCGCACTGCACCCAACTCAA
ACAGCACCGCCACCAGCACCACCGCGAACTCAAATTCACGTAGTAAAGCA
CGACAGTTCACATTTGTTGCAAGCTTTCTAGACC

BO14586.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:25:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG12352-PA 555 san-RA 1..552 17..568 2735 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:26:28
Subject Length Description Subject Range Query Range Score Percent Strand
san-RA 808 CG12352-RA 118..671 15..568 2755 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:26:24
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11360957..11361282 23..348 1615 99.7 Plus
2R 25286936 2R 11361515..11361734 349..568 1100 100 Plus
Blast to na_te.dros performed on 2015-02-13 07:26:26 has no hits.

BO14586.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:32:26 Download gff for BO14586.5prime
Subject Subject Range Query Range Percent Splice Strand
san-PA 1..555 17..572 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:30:07 Download gff for BO14586.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12352-PA 1..555 17..572 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 09:31:07 Download gff for BO14586.5prime
Subject Subject Range Query Range Percent Splice Strand
san-RA 110..676 6..573 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:37:24 Download gff for BO14586.5prime
Subject Subject Range Query Range Percent Splice Strand
san-RA 110..676 6..573 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:37:24 Download gff for BO14586.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 11361515..11361739 349..573 99   Plus
2R 11360950..11361282 13..348 98 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:31:07 Download gff for BO14586.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7248455..7248787 13..348 98 -> Plus
arm_2R 7249020..7249244 349..573 99   Plus

BO14586.complete Sequence

586 bp assembled on 2007-10-29

GenBank Submission: FJ633185

> BO14586.complete
GAAGTTATCAGTCGACATGACTAGGAGCAGCATCGAACTGGGCGACGTGA
CGCCCCACAACATCAAGCAGCTAAAGAAGCTCAACACCGTGGTTTTCCCG
GTCTCCTACAATGACAAGTTTTACGTGGACGTCCTGGAGGCCGGCGAACT
GGCCAAATTGGCCTACTACAACGACATTGTAGTGGGCGCCGTCTGCTGTC
GCATCGACAACACTGAGAACCAGCGGCGCCTGTATATCATGACCCTAGGA
TGCCTCTCCCCGTACCGGCGCCTGGGCATCGGCACAGTTATGTTCGAGCA
CATTATGAACTTCGCCGAGAAGGACGGAAACTTCGACAGCATTTTTCTAC
ATGTGCAAATCAACAACAACGGAGCCATCGAGTTCTATAAGAAGTTTGGT
TTCGAGATTGTTGACACCAAGGAGCAATACTATAAGCGCATCGAGCCGGC
GGACGCTCATGTACTGCAAAAGACTCTGCGCCGCACTGCACCCAACTCAA
ACAGCACCGCCACCAGCACCACCGCGAACTCAAATTCACGTAGTAAAGCA
CGACAGTTCACATTTGTTGCAAGCTTTCTAGACCAT

BO14586.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:36:53
Subject Length Description Subject Range Query Range Score Percent Strand
san-RA 555 CG12352-PA 1..552 17..568 2745 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:36:54
Subject Length Description Subject Range Query Range Score Percent Strand
san-RA 808 CG12352-RA 118..671 15..568 2755 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:36:50
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11360957..11361282 23..348 1615 99.7 Plus
2R 25286936 2R 11361515..11361734 349..568 1100 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:36:52 has no hits.

BO14586.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:02:26 Download gff for BO14586.complete
Subject Subject Range Query Range Percent Splice Strand
san-RA 1..555 17..572 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:15:40 Download gff for BO14586.complete
Subject Subject Range Query Range Percent Splice Strand
san-RA 118..684 6..573 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:09:37 Download gff for BO14586.complete
Subject Subject Range Query Range Percent Splice Strand
san-RA 120..671 17..570 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:45:16 Download gff for BO14586.complete
Subject Subject Range Query Range Percent Splice Strand
san-RA 128..679 17..570 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:24:56 Download gff for BO14586.complete
Subject Subject Range Query Range Percent Splice Strand
san-RA 120..671 17..570 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:24:56 Download gff for BO14586.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11360953..11361282 17..348 98 -> Plus
2R 11361515..11361734 349..570 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:09:37 Download gff for BO14586.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7248458..7248787 17..348 98 -> Plus
arm_2R 7249020..7249239 349..570 99   Plus

BO14586.pep Sequence

Translation from 16 to 586

> BO14586.pep
MTRSSIELGDVTPHNIKQLKKLNTVVFPVSYNDKFYVDVLEAGELAKLAY
YNDIVVGAVCCRIDNTENQRRLYIMTLGCLSPYRRLGIGTVMFEHIMNFA
EKDGNFDSIFLHVQINNNGAIEFYKKFGFEIVDTKEQYYKRIEPADAHVL
QKTLRRTAPNSNSTATSTTANSNSRSKARQFTFVASFLDH

BO14586.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:34:09
Subject Length Description Subject Range Query Range Score Percent Strand
san-PA 184 CG12352-PA 1..184 1..184 954 100 Plus