Clone Sequence Records
BO14588.3prime Sequence
407 bp (406 high quality bases) assembled on 2006-05-29
> BO14588.3prime
ATGGTCTAGAAAGCTTGCGCATTCGCTGTGTGGCGTTGAGTGGCGTTTTT
TCGGCTTTAGCAGAGCACCGTCAACTGTACAACTGTTGCCAAGAATACGT
ATCGAATCGGCCGAGTGAGAATCTATTTTGTGAGGAAAACAAGAGTGGCG
ATGCGATGATGATGTGTTGTGGTTAATGTTTACCCGCTTCTTAGTTACGG
CAACATCCGATGCGCCTTCTAAAACCACATCAGCCATCTTTACACTGCCT
ACATCGCCCCCATCAGGAGACACACTTCGACGACGCTTTTCCCGTTGAAC
CTGTTGGTCTGCTCCTTGATGCACCTGCTCCTTCTCGCCAGCACTCTCCG
GCTGATCGCCGCCTTCAGATTTTTCCATGGCCTCGCCGCCCATGTCGACT
GATAACT
BO14588.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:25:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33937-PA | 378 | CG33937-RA | 1..375 | 393..19 | 1875 | 100 | Minus |
CG33937-PB | 378 | CG33937-RB | 1..375 | 393..19 | 1875 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:05:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43675-RB | 1628 | CG43675-RB | 1193..1567 | 393..19 | 1875 | 100 | Minus |
CG43675-RC | 1820 | CG43675-RC | 1385..1759 | 393..19 | 1875 | 100 | Minus |
CG45050-RI | 2529 | CG45050-RI | 1193..1402 | 393..184 | 1050 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:05:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 9357246..9357620 | 393..19 | 1875 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 23:05:19 has no hits.
BO14588.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:32:29 Download gff for
BO14588.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33937-PB | 1..378 | 15..393 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:30:11 Download gff for
BO14588.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33937-PB | 1..378 | 15..393 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:15:13 Download gff for
BO14588.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33937-RA | 1032..1409 | 15..393 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:16:35 Download gff for
BO14588.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43675-RC | 1385..1762 | 15..393 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:16:35 Download gff for
BO14588.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 9357246..9357623 | 15..393 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:15:13 Download gff for
BO14588.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 5182968..5183345 | 15..393 | 99 | | Minus |
BO14588.5prime Sequence
407 bp (406 high quality bases) assembled on 2006-05-29
> BO14588.5prime
GAAGTTATCAGTCGACATGGGCGGCGAGGCCATGGAAAAATCTGAAGGCG
GCGATCAGCCGGAGAGTGCTGGCGAGAAGGAGCAGGTGCATCAAGGAGCA
GACCAACAGGTTCAACGGGAAAAGCGTCGTCGAAGTGTGTCTCCTGATGG
GGGCGATGTAGGCAGTGTAAAGATGGCTGATGTGGTTTTAGAAGGCGCAT
CGGATGTTGCCGTAACTAAGAAGCGGGTAAACATTAACCACAACACATCA
TCATCGCATCGCCACTCTTGTTTTCCTCACAAAATAGATTCTCACTCGGC
CGATTCGATACGTATTCTTGGCAACAGTTGTACAGTTGACGGTGCTCTGC
TAAAGCCGAAAAAACGCCACTCAACGCCACACAGCGAATGCGCAAGCTTT
CTAGACC
BO14588.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:25:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33937-PA | 378 | CG33937-RA | 1..375 | 17..391 | 1875 | 100 | Plus |
CG33937-PB | 378 | CG33937-RB | 1..375 | 17..391 | 1875 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:26:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43675-RB | 1628 | CG43675-RB | 1193..1567 | 17..391 | 1875 | 100 | Plus |
CG43675-RC | 1820 | CG43675-RC | 1385..1759 | 17..391 | 1875 | 100 | Plus |
CG45050-RI | 2529 | CG45050-RI | 1193..1402 | 17..226 | 1050 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 13:26:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 9357246..9357620 | 17..391 | 1875 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 13:26:42 has no hits.
BO14588.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:32:30 Download gff for
BO14588.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33937-PB | 1..378 | 17..395 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:30:12 Download gff for
BO14588.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33937-PB | 1..378 | 17..395 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 04:12:26 Download gff for
BO14588.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33937-RA | 1032..1409 | 17..395 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:57:50 Download gff for
BO14588.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43675-RC | 1385..1762 | 17..395 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:57:50 Download gff for
BO14588.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 9357246..9357623 | 17..395 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 04:12:26 Download gff for
BO14588.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 5182968..5183345 | 17..395 | 99 | | Plus |
BO14588.complete Sequence
409 bp assembled on 2006-10-11
GenBank Submission: FJ633186
> BO14588.complete
GAAGTTATCAGTCGACATGGGCGGCGAGGCCATGGAAAAATCTGAAGGCG
GCGATCAGCCGGAGAGTGCTGGCGAGAAGGAGCAGGTGCATCAAGGAGCA
GACCAACAGGTTCAACGGGAAAAGCGTCGTCGAAGTGTGTCTCCTGATGG
GGGCGATGTAGGCAGTGTAAAGATGGCTGATGTGGTTTTAGAAGGCGCAT
CGGATGTTGCCGTAACTAAGAAGCGGGTAAACATTAACCACAACACATCA
TCATCGCATCGCCACTCTTGTTTTCCTCACAAAATAGATTCTCACTCGGC
CGATTCGATACGTATTCTTGGCAACAGTTGTACAGTTGACGGTGCTCTGC
TAAAGCCGAAAAAACGCCACTCAACGCCACACAGCGAATGCGCAAGCTTT
CTAGACCAT
BO14588.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:32:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG45050-RI | 552 | CG45050-PI | 1..210 | 17..226 | 1050 | 100 | Plus |
CG45050-RH | 552 | CG45050-PH | 1..210 | 17..226 | 1050 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:32:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43675-RB | 1628 | CG43675-RB | 1193..1567 | 17..391 | 1875 | 100 | Plus |
CG43675-RC | 1820 | CG43675-RC | 1385..1759 | 17..391 | 1875 | 100 | Plus |
CG45050-RI | 2529 | CG45050-RI | 1193..1402 | 17..226 | 1050 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:32:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 9357246..9357620 | 17..391 | 1875 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:32:02 has no hits.
BO14588.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:06:09 Download gff for
BO14588.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33937-RB | 1..378 | 17..395 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:21:29 Download gff for
BO14588.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33937-RB | 1091..1468 | 17..395 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:22:46 Download gff for
BO14588.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33937-RA | 1032..1406 | 17..393 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:06:09 Download gff for
BO14588.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33937-RB | 1091..1468 | 17..395 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:00:16 Download gff for
BO14588.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43675-RC | 1385..1759 | 17..393 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:00:16 Download gff for
BO14588.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 9357246..9357620 | 17..393 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:22:46 Download gff for
BO14588.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 5182968..5183342 | 17..393 | 99 | | Plus |
BO14588.pep Sequence
Translation from 16 to 409
> BO14588.pep
MGGEAMEKSEGGDQPESAGEKEQVHQGADQQVQREKRRRSVSPDGGDVGS
VKMADVVLEGASDVAVTKKRVNINHNTSSSHRHSCFPHKIDSHSADSIRI
LGNSCTVDGALLKPKKRHSTPHSECASFLDH
BO14588.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:04:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG45050-PI | 183 | CG45050-PI | 1..70 | 1..70 | 351 | 100 | Plus |
CG45050-PH | 183 | CG45050-PH | 1..70 | 1..70 | 351 | 100 | Plus |