Clone Sequence Records
BO14607.3prime Sequence
461 bp (461 high quality bases) assembled on 2006-06-02
> BO14607.3prime
ATGGTCTAGAAAGCTTGCCATGTCCTCTTTCTCCTCATCTCCGTCGTCAG
CGTCCACGCCCACCGCCTTGTCGGGATAGAATTTCTTGAGTATCCTGTTC
ACATCGGGCACCAGTGCCTCGTAGTCCAGTGGGAACTTATCCCGACGCGG
CGGTCCCTTCTCCAAGCCGGACCACAGCAGATGCTCCGAGGTGCGTGCAT
TTTGCGAGAAACCTATCTCGAAGGCTCCTTCCCGCGGAACCTGGCGTCCG
TTTCGATTCTTCACCAGCTGGAACTTGCGCTCCGGTATCCGTTGCGTGAA
GAATGTTCCGCACTCGTCGGCCTTGGTCTGGAAAATGGGACACTCGTACG
TGTGCTCGATGTAGATCATGGAACGATCCTTGGAGAAATGCTCATCGGAG
GACCAGTCCACGTCCTTTTTCTTTTTTGCCGGCTTCTTTGGTGGCATGTC
GACTGATAACT
BO14607.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:25:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13186-PA | 432 | CG13186-RA | 1..429 | 447..19 | 2095 | 99.5 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 18:28:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13186-RA | 782 | CG13186-RA | 43..471 | 447..19 | 2115 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:28:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12081318..12081746 | 447..19 | 2115 | 99.5 | Minus |
Blast to na_te.dros performed on 2015-02-02 18:28:41 has no hits.
BO14607.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:32:56 Download gff for
BO14607.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13186-PA | 1..432 | 15..447 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:30:47 Download gff for
BO14607.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13186-PA | 1..432 | 15..447 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:48:20 Download gff for
BO14607.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13186-RA | 39..479 | 10..455 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 21:01:50 Download gff for
BO14607.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13186-RA | 39..479 | 10..455 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 21:01:50 Download gff for
BO14607.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12081314..12081754 | 10..455 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:48:20 Download gff for
BO14607.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7968819..7969259 | 10..455 | 97 | | Minus |
BO14607.5prime Sequence
461 bp (461 high quality bases) assembled on 2006-06-02
> BO14607.5prime
GAAATGATCAGTCGACATGCCACCAAAGAAGCCGGCAAAAAAGAAAAAGG
ACGTGGACTGGTCCTCCGATGAGCATTTCTCCAAGGATCGTTCCATGATC
TACATCGAGCACACGTACGAGTGTCCCATTTTCCAGACCAAGGCCGACGA
GTGCGGAACATTCTTCACGCAACGGATACCGGAGCGCAAGTTCCAGCTGG
TGAAGAATCGAAACGGACGCCAGGTTCCGCGGGAAGGAGCCTTCGAGATA
GGTTTCTCGCAAAATGCACGCACCTCGGAGCATCTGCTGTGGTCCGGCTT
GGAGAAGGGACCGCCGCGTCGGGATAAGTTCCCACTGGACTACGAGGCAC
TGGTGCCCGATGTGAACAGGATACTCAAGAAATTCTATCCCGACAAGGCG
GTGGGCGTGGACGCTGACGACGGAGATGAGGAGAAAGAGGACATGGCAAG
CTTTCTAGACC
BO14607.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:25:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13186-PA | 432 | CG13186-RA | 1..429 | 17..445 | 2095 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 22:34:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13186-RA | 782 | CG13186-RA | 43..471 | 17..445 | 2115 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 22:34:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12081318..12081746 | 17..445 | 2115 | 99.5 | Plus |
Blast to na_te.dros performed on 2015-02-09 22:34:53 has no hits.
BO14607.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:32:57 Download gff for
BO14607.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13186-PA | 1..432 | 17..449 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:30:48 Download gff for
BO14607.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13186-PA | 1..432 | 17..449 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:21:40 Download gff for
BO14607.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13186-RA | 39..479 | 9..454 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:46:12 Download gff for
BO14607.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13186-RA | 39..479 | 9..454 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:46:12 Download gff for
BO14607.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12081314..12081754 | 13..454 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:21:40 Download gff for
BO14607.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7968819..7969259 | 13..454 | 98 | | Plus |
BO14607.complete Sequence
463 bp (463 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633193
> BO14607.complete
GAAGTTATCAGTCGACATGCCACCAAAGAAGCCGGCAAAAAAGAAAAAGG
ACGTGGACTGGTCCTCCGATGAGCATTTCTCCAAGGATCGTTCCATGATC
TACATCGAGCACACGTACGAGTGTCCCATTTTCCAGACCAAGGCCGACGA
GTGCGGAACATTCTTCACGCAACGGATACCGGAGCGCAAGTTCCAGCTGG
TGAAGAATCGAAACGGACGCCAGGTTCCGCGGGAAGGAGCCTTCGAGATA
GGTTTCTCGCAAAATGCACGCACCTCGGAGCATCTGCTGTGGTCCGGCTT
GGAGAAGGGACCGCCGCGTCGGGATAAGTTCCCACTGGACTACGAGGCAC
TGGTGCCCGATGTGAACAGGATACTCAAGAAATTCTATCCCGACAAGGCG
GTGGGCGTGGACGCTGACGACGGAGATGAGGAGAAAGAGGACATGGCAAG
CTTTCTAGACCAT
BO14607.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:34:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13186-RA | 432 | CG13186-PA | 1..429 | 17..445 | 2115 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:34:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13186-RA | 782 | CG13186-RA | 43..471 | 17..445 | 2115 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:34:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12081318..12081746 | 17..445 | 2115 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-27 23:34:02 has no hits.
BO14607.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:33:53 Download gff for
BO14607.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13186-RA | 1..432 | 17..449 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:50:24 Download gff for
BO14607.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13186-RA | 39..479 | 9..454 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:32:03 Download gff for
BO14607.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13186-RA | 43..471 | 17..447 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:33:53 Download gff for
BO14607.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13186-RA | 39..479 | 9..454 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:03:26 Download gff for
BO14607.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13186-RA | 43..471 | 17..447 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:03:26 Download gff for
BO14607.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12081318..12081746 | 17..447 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:32:03 Download gff for
BO14607.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7968823..7969251 | 17..447 | 99 | | Plus |
BO14607.pep Sequence
Translation from 16 to 463
> BO14607.pep
MPPKKPAKKKKDVDWSSDEHFSKDRSMIYIEHTYECPIFQTKADECGTFF
TQRIPERKFQLVKNRNGRQVPREGAFEIGFSQNARTSEHLLWSGLEKGPP
RRDKFPLDYEALVPDVNRILKKFYPDKAVGVDADDGDEEKEDMASFLDH
BO14607.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:59:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13186-PA | 143 | CG13186-PA | 1..143 | 1..143 | 775 | 100 | Plus |