Clone BO14607 Report

Search the DGRC for BO14607

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:146
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptCG13186-RA
Protein status:BO14607.pep: validated full length
Sequenced Size:463

Clone Sequence Records

BO14607.3prime Sequence

461 bp (461 high quality bases) assembled on 2006-06-02

> BO14607.3prime
ATGGTCTAGAAAGCTTGCCATGTCCTCTTTCTCCTCATCTCCGTCGTCAG
CGTCCACGCCCACCGCCTTGTCGGGATAGAATTTCTTGAGTATCCTGTTC
ACATCGGGCACCAGTGCCTCGTAGTCCAGTGGGAACTTATCCCGACGCGG
CGGTCCCTTCTCCAAGCCGGACCACAGCAGATGCTCCGAGGTGCGTGCAT
TTTGCGAGAAACCTATCTCGAAGGCTCCTTCCCGCGGAACCTGGCGTCCG
TTTCGATTCTTCACCAGCTGGAACTTGCGCTCCGGTATCCGTTGCGTGAA
GAATGTTCCGCACTCGTCGGCCTTGGTCTGGAAAATGGGACACTCGTACG
TGTGCTCGATGTAGATCATGGAACGATCCTTGGAGAAATGCTCATCGGAG
GACCAGTCCACGTCCTTTTTCTTTTTTGCCGGCTTCTTTGGTGGCATGTC
GACTGATAACT

BO14607.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:25:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG13186-PA 432 CG13186-RA 1..429 447..19 2095 99.5 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 18:28:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG13186-RA 782 CG13186-RA 43..471 447..19 2115 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:28:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12081318..12081746 447..19 2115 99.5 Minus
Blast to na_te.dros performed on 2015-02-02 18:28:41 has no hits.

BO14607.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:32:56 Download gff for BO14607.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13186-PA 1..432 15..447 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:30:47 Download gff for BO14607.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13186-PA 1..432 15..447 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:48:20 Download gff for BO14607.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13186-RA 39..479 10..455 97   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 21:01:50 Download gff for BO14607.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13186-RA 39..479 10..455 97   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 21:01:50 Download gff for BO14607.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 12081314..12081754 10..455 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:48:20 Download gff for BO14607.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7968819..7969259 10..455 97   Minus

BO14607.5prime Sequence

461 bp (461 high quality bases) assembled on 2006-06-02

> BO14607.5prime
GAAATGATCAGTCGACATGCCACCAAAGAAGCCGGCAAAAAAGAAAAAGG
ACGTGGACTGGTCCTCCGATGAGCATTTCTCCAAGGATCGTTCCATGATC
TACATCGAGCACACGTACGAGTGTCCCATTTTCCAGACCAAGGCCGACGA
GTGCGGAACATTCTTCACGCAACGGATACCGGAGCGCAAGTTCCAGCTGG
TGAAGAATCGAAACGGACGCCAGGTTCCGCGGGAAGGAGCCTTCGAGATA
GGTTTCTCGCAAAATGCACGCACCTCGGAGCATCTGCTGTGGTCCGGCTT
GGAGAAGGGACCGCCGCGTCGGGATAAGTTCCCACTGGACTACGAGGCAC
TGGTGCCCGATGTGAACAGGATACTCAAGAAATTCTATCCCGACAAGGCG
GTGGGCGTGGACGCTGACGACGGAGATGAGGAGAAAGAGGACATGGCAAG
CTTTCTAGACC

BO14607.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:25:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG13186-PA 432 CG13186-RA 1..429 17..445 2095 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 22:34:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG13186-RA 782 CG13186-RA 43..471 17..445 2115 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 22:34:50
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12081318..12081746 17..445 2115 99.5 Plus
Blast to na_te.dros performed on 2015-02-09 22:34:53 has no hits.

BO14607.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:32:57 Download gff for BO14607.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13186-PA 1..432 17..449 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:30:48 Download gff for BO14607.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13186-PA 1..432 17..449 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:21:40 Download gff for BO14607.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13186-RA 39..479 9..454 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:46:12 Download gff for BO14607.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13186-RA 39..479 9..454 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:46:12 Download gff for BO14607.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 12081314..12081754 13..454 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:21:40 Download gff for BO14607.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7968819..7969259 13..454 98   Plus

BO14607.complete Sequence

463 bp (463 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633193

> BO14607.complete
GAAGTTATCAGTCGACATGCCACCAAAGAAGCCGGCAAAAAAGAAAAAGG
ACGTGGACTGGTCCTCCGATGAGCATTTCTCCAAGGATCGTTCCATGATC
TACATCGAGCACACGTACGAGTGTCCCATTTTCCAGACCAAGGCCGACGA
GTGCGGAACATTCTTCACGCAACGGATACCGGAGCGCAAGTTCCAGCTGG
TGAAGAATCGAAACGGACGCCAGGTTCCGCGGGAAGGAGCCTTCGAGATA
GGTTTCTCGCAAAATGCACGCACCTCGGAGCATCTGCTGTGGTCCGGCTT
GGAGAAGGGACCGCCGCGTCGGGATAAGTTCCCACTGGACTACGAGGCAC
TGGTGCCCGATGTGAACAGGATACTCAAGAAATTCTATCCCGACAAGGCG
GTGGGCGTGGACGCTGACGACGGAGATGAGGAGAAAGAGGACATGGCAAG
CTTTCTAGACCAT

BO14607.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:34:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG13186-RA 432 CG13186-PA 1..429 17..445 2115 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:34:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG13186-RA 782 CG13186-RA 43..471 17..445 2115 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:34:02
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12081318..12081746 17..445 2115 99.5 Plus
Blast to na_te.dros performed on 2014-11-27 23:34:02 has no hits.

BO14607.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:33:53 Download gff for BO14607.complete
Subject Subject Range Query Range Percent Splice Strand
CG13186-RA 1..432 17..449 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:50:24 Download gff for BO14607.complete
Subject Subject Range Query Range Percent Splice Strand
CG13186-RA 39..479 9..454 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:32:03 Download gff for BO14607.complete
Subject Subject Range Query Range Percent Splice Strand
CG13186-RA 43..471 17..447 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:33:53 Download gff for BO14607.complete
Subject Subject Range Query Range Percent Splice Strand
CG13186-RA 39..479 9..454 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:03:26 Download gff for BO14607.complete
Subject Subject Range Query Range Percent Splice Strand
CG13186-RA 43..471 17..447 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:03:26 Download gff for BO14607.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12081318..12081746 17..447 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:32:03 Download gff for BO14607.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7968823..7969251 17..447 99   Plus

BO14607.pep Sequence

Translation from 16 to 463

> BO14607.pep
MPPKKPAKKKKDVDWSSDEHFSKDRSMIYIEHTYECPIFQTKADECGTFF
TQRIPERKFQLVKNRNGRQVPREGAFEIGFSQNARTSEHLLWSGLEKGPP
RRDKFPLDYEALVPDVNRILKKFYPDKAVGVDADDGDEEKEDMASFLDH

BO14607.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:59:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG13186-PA 143 CG13186-PA 1..143 1..143 775 100 Plus