Clone BO14610 Report

Search the DGRC for BO14610

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:146
Well:10
Vector:pDNR-Dual
Associated Gene/TranscriptCG7196-RA
Protein status:BO14610.pep: validated full length
Sequenced Size:1357

Clone Sequence Records

BO14610.5prime Sequence

695 bp (648 high quality bases) assembled on 2006-06-02

> BO14610.5prime
GAAGTTATCAGTCGACATGGCACGCCTGGTGTTTACGGAGAAAGATCACA
ATGCATACGATCCCAAAAAGTATAAGGTGGTGCACAAGAACCACTGGCGA
CAGGTCAGCCTGCTGCTGCAGCCTTCCAACAAGAAGTGGTGGGAGGATCC
CGATGTCATTGTTGCTTTCAATTTACCGCGCATTAGCGCCCGCCTGGAGC
GTCTGATGGGCACCAATGTGGTCAAGCTAACGGACCGGAGCTACATGAAG
GAGCTGCGGGAACGAATTGACGAGGATTACCGCAAACAGCTGCTGTCCCG
CATTCGCGCCCGGGAGTTAAAAGAAGTGGAGCGCGAACGAATGCTGATTA
TCGAGGGCAAGTCAGACGTAATACCAGACGAACTAGCCAACGATCCCATA
TTCATGGTTAACAAAGATGCCAACATGGAGATTCAAAAGGAGCGCTCCAA
GCTGAAGACCGCTCGCGAGAAGAACGCGGAGCGTTTGAAGCTGCAGGGCG
TTAAATGGGAGCGGGAAAGGCTTCAACATGCCGCCAAGGAAGCCGAACTG
CTGGCCAAGAAACGCGAGCGGCACCGCCAACAGAAATTACTGGTGGAGCA
GTACAGGACCGAGGATGCGGAGAGGGGAATGGATCTGCTGCGCATCGATA
ACGAAGACTGGCGGGAGTGCGAAAAGAGCCTGAAGGAGTTCCTCG

BO14610.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:25:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG7196-PA 1326 CG7196-RA 1..679 17..695 3395 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:08:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG46025-RA 1837 CG46025-RA 162..840 17..695 3395 100 Plus
CG46025-RC 2036 CG46025-RC 162..840 17..695 3395 100 Plus
CG46025-RD 2435 CG46025-RD 710..1239 166..695 2650 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 19:08:38
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7763504..7763696 450..642 965 100 Plus
2L 23513712 2L 7761885..7762039 166..320 760 99.4 Plus
2L 23513712 2L 7763308..7763444 315..451 685 100 Plus
2L 23513712 2L 7754458..7754549 74..165 460 100 Plus
2L 23513712 2L 7754335..7754396 17..78 310 100 Plus
2L 23513712 2L 7764540..7764593 642..695 270 100 Plus
Blast to na_te.dros performed on 2015-02-11 19:08:39 has no hits.

BO14610.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:32:58 Download gff for BO14610.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7196-PA 1..679 17..695 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:30:49 Download gff for BO14610.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7196-PA 1..679 17..695 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 13:57:27 Download gff for BO14610.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7196-RA 162..840 17..695 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:03:43 Download gff for BO14610.5prime
Subject Subject Range Query Range Percent Splice Strand
CG46025-RC 162..840 17..695 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:03:43 Download gff for BO14610.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 7754335..7754394 17..76 100 -> Plus
2L 7754461..7754549 77..165 100 -> Plus
2L 7761885..7762035 166..316 100 -> Plus
2L 7763310..7763444 317..451 100 -> Plus
2L 7763506..7763696 452..642 100 -> Plus
2L 7764541..7764593 643..695 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 13:57:27 Download gff for BO14610.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7754335..7754394 17..76 100 -> Plus
arm_2L 7754461..7754549 77..165 100 -> Plus
arm_2L 7761885..7762035 166..316 100 -> Plus
arm_2L 7763310..7763444 317..451 100 -> Plus
arm_2L 7763506..7763696 452..642 100 -> Plus
arm_2L 7764541..7764593 643..695 100   Plus

BO14610.complete Sequence

1357 bp (1357 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633194

> BO14610.complete
GAAGTTATCAGTCGACATGGCACGCCTGGTGTTTACGGAGAAAGATCACA
ATGCATACGATCCCAAAAAGTATAAGGTGGTGCACAAGAACCACTGGCGA
CAGGTCAGCCTGCTGCTGCAGCCTTCCAACAAGAAGTGGTGGGAGGATCC
CGATGTCATTGTTGCTTTCAATTTACCGCGCATTAGCGCCCGCCTGGAGC
GTCTGATGGGCACCAATGTGGTCAAGCTAACGGACCGGAGCTACATGAAG
GAGCTGCGGGAACGAATTGACGAGGATTACCGCAAACAGCTGCTGTCCCG
CATTCGCGCCCGGGAGTTAAAAGAAGTGGAGCGCGAACGAATGCTGATTA
TCGAGGGCAAGTCAGACGTAATACCAGACGAACTAGCCAACGATCCCATA
TTCATGGTTAACAAAGATGCCAACATGGAGATTCAAAAGGAGCGCTCCAA
GCTGAAGACCGCTCGCGAGAAGAACGCGGAGCGTTTGAAGCTGCAGGGCG
TTAAATGGGAGCGGGAAAGGCTTCAACATGCCGCCAAGGAAGCCGAACTG
CTGGCCAAGAAACGCGAGCGGCACCGCCAACAGAAATTACTGGTGGAGCA
GTACAGGACCGAGGATGCGGAGAGGGGAATGGATCTGCTGCGCATCGATA
ACGAAGACTGGCGGGAGTGCGAAAAGAGCCTGAAGGAGTTCCTCGAACAG
GAGCGTGCCAAAATGAAGGAGCGTTCGTTGCGCATATCCCAGCCCTACTC
CTCGGATCCCCAGGATATACAGAATATAGTCAGGGCCAGGCAAAAGTTCC
GGGAGACCGAGCTGCGTATTCGCAATCAGCTGGAGGACAAGCTAAAAGAT
GTCAAACTTGCGGTCACCACTCAACAACTAACCGAACTTATCGAGGATGC
CCATCGTTCCAGCGGGGAGATCATCATGCCACAAGAACCTTCGATGGAGG
ACGATGACTTCCAGGGCGGCGCAGTGAACTCCAAATATCTGGACGATGCC
ACCGATGTCTCCGAGGAGACGGTGATCAGCGAGGATGCCATCAGCCTGAC
GCTGGCCAAGCAGCAGTACGCGGAGGAACTGGAGGCCGAAATGGAGGACG
AGTTCAATCGAGGTCTGCTCATCTCCAAGCAGCAGTACGATCAGCTGCGC
TTCGAGGATGAGAAGATCGTGGCGCTCAGAAATGCCAAGGATATTCGCGA
GCTGTATCAACTGGCCGAGGAGATCATCATGGGTGAGAACTATGTCGAGG
CACCGGAGGAGTGCGAGGAGGAGGCGGTGGTGGAGGAGCCGGAACAAGAT
ATCTCCTCCGATCACGAGGCCCAGGAGCCAGCCAAAGCCGCAAGCTTTCT
AGACCAT

BO14610.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:15:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG46025-RA 1326 CG46025-PA 1..1323 17..1339 6540 99.6 Plus
CG46025-RC 1326 CG46025-PC 1..1323 17..1339 6540 99.6 Plus
CG46025-RD 1791 CG46025-PD 615..1788 166..1339 5795 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:15:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG46025-RA 1837 CG46025-RA 162..1484 17..1339 6540 99.6 Plus
CG46025-RC 2036 CG46025-RC 162..1484 17..1339 6540 99.6 Plus
CG46025-RD 2435 CG46025-RD 710..1883 166..1339 5795 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:15:32
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7764753..7765155 788..1190 1955 99 Plus
2L 23513712 2L 7763504..7763696 450..642 965 100 Plus
2L 23513712 2L 7761885..7762039 166..320 760 99.4 Plus
2L 23513712 2L 7764540..7764688 642..790 745 100 Plus
2L 23513712 2L 7765212..7765363 1188..1339 745 99.3 Plus
2L 23513712 2L 7763308..7763444 315..451 685 100 Plus
2L 23513712 2L 7754458..7754549 74..165 460 100 Plus
2L 23513712 2L 7754335..7754396 17..78 310 100 Plus
Blast to na_te.dros performed on 2014-11-28 08:15:33 has no hits.

BO14610.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:18:52 Download gff for BO14610.complete
Subject Subject Range Query Range Percent Splice Strand
CG7196-RA 1..1326 17..1343 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:50:15 Download gff for BO14610.complete
Subject Subject Range Query Range Percent Splice Strand
CG7196-RA 145..1467 17..1341 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:45 Download gff for BO14610.complete
Subject Subject Range Query Range Percent Splice Strand
CG7196-RA 162..1484 17..1341 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:18:52 Download gff for BO14610.complete
Subject Subject Range Query Range Percent Splice Strand
CG7196-RA 145..1470 17..1343 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:14:12 Download gff for BO14610.complete
Subject Subject Range Query Range Percent Splice Strand
CG46025-RC 162..1484 17..1341 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:14:12 Download gff for BO14610.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7754335..7754394 17..76 100 -> Plus
2L 7754461..7754549 77..165 100 -> Plus
2L 7761885..7762035 166..316 100 -> Plus
2L 7763310..7763444 317..451 100 -> Plus
2L 7763506..7763696 452..642 100 -> Plus
2L 7764541..7764687 643..789 100 -> Plus
2L 7764755..7765154 790..1189 99 -> Plus
2L 7765214..7765363 1190..1341 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:45 Download gff for BO14610.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7764541..7764687 643..789 100 -> Plus
arm_2L 7754335..7754394 17..76 100 -> Plus
arm_2L 7754461..7754549 77..165 100 -> Plus
arm_2L 7761885..7762035 166..316 100 -> Plus
arm_2L 7763310..7763444 317..451 100 -> Plus
arm_2L 7763506..7763696 452..642 100 -> Plus
arm_2L 7765214..7765363 1190..1341 98   Plus
arm_2L 7764755..7765154 790..1189 99 -> Plus

BO14610.pep Sequence

Translation from 16 to 1357

> BO14610.pep
MARLVFTEKDHNAYDPKKYKVVHKNHWRQVSLLLQPSNKKWWEDPDVIVA
FNLPRISARLERLMGTNVVKLTDRSYMKELRERIDEDYRKQLLSRIRARE
LKEVERERMLIIEGKSDVIPDELANDPIFMVNKDANMEIQKERSKLKTAR
EKNAERLKLQGVKWERERLQHAAKEAELLAKKRERHRQQKLLVEQYRTED
AERGMDLLRIDNEDWRECEKSLKEFLEQERAKMKERSLRISQPYSSDPQD
IQNIVRARQKFRETELRIRNQLEDKLKDVKLAVTTQQLTELIEDAHRSSG
EIIMPQEPSMEDDDFQGGAVNSKYLDDATDVSEETVISEDAISLTLAKQQ
YAEELEAEMEDEFNRGLLISKQQYDQLRFEDEKIVALRNAKDIRELYQLA
EEIIMGENYVEAPEECEEEAVVEEPEQDISSDHEAQEPAKAASFLDH

BO14610.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:54:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG46025-PA 441 CG46025-PA 1..441 1..441 2233 100 Plus
CG46025-PC 441 CG46025-PC 1..441 1..441 2233 100 Plus
CG46025-PD 596 CG46025-PD 206..596 51..441 1954 100 Plus
CG46025-PB 209 CG46025-PB 1..209 233..441 1041 100 Plus
rudhira-PE 2075 CG43154-PE 1402..1655 57..313 158 24.8 Plus