Clone Sequence Records
BO14613.5prime Sequence
811 bp (679 high quality bases) assembled on 2006-06-02
> BO14613.5prime
GAAGTTATCAGTCGACATGGAGGATTTGCATTTAAAACTCGGCGATCTGC
CCCAGGAAGTATTGGCTGCACGGCACAGCATGATTATGGGCCAAAAGTTG
GCTGGATCACTTGGTGAGACACAGCATCACCTTCAGCATCAACATCACCT
GAATCACCAACTGAACCAGCTCAATCAGTTGAGCCACTTGAATCAGTTCC
ATCAGTTAAACCAATTGAATCAATTGAGTCAGCTACACCAGCATATACAA
CATAAGATCTCTTCGGGGATGAACCTAAATTTGGATCTGGACCATAAGAT
GGAGACGGAGATGGAGTTGGGTCTGGGCCTTGATGTGGATGTGAATCTGG
GAGTTAATCTGGACATGAATCCGGAGGGCAGTATTACCAATAGTACCAGC
CGTACCAGCAGTGCTAGCAGGACCAGCAGCACCAACACGTGCAGCGATCA
GGGGCAAGGACATGGATCTGGGATTGGACTTGGTGACCCAAAGCGGGACC
AAAGCCAAGTCCACTACGCCCATGACCCTGCCCAGGATAATGGCGATTCA
CCGAATGTCAAGAGTTGTACTGGAATGTGCAGCCATCAAACAGAGAGCAA
TATGAATAAGGGGGATTCCCTAACGCATACCAAGTCTTCATCGCCGAAGA
CGGACAAGGGGGAGAAGGATAAGGAGGAGCTTAAAGCGAAGGAGGAGGAG
GAGGAGGAGTTTAAAGAGGATACGGAGGATAAGAAGGGATAACGAGGACG
TTTTTCAGAAACAGGAACCGTCTTCTTCCATGTTGATTAAGGCGGCCAAC
TCCAAGCTAAA
BO14613.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:25:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15572-PA | 1458 | CG15572-RA | 1..721 | 17..737 | 3605 | 100 | Plus |
CG15572-PA | 1458 | CG15572-RA | 720..794 | 737..811 | 350 | 98.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 10:52:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15572-RA | 2383 | CG15572-RA | 331..1124 | 17..811 | 3935 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 10:51:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 4269031..4269824 | 17..811 | 3910 | 99.7 | Plus |
Blast to na_te.dros performed on 2015-02-09 10:52:01 has no hits.
BO14613.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:33:02 Download gff for
BO14613.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15572-PA | 1..791 | 17..808 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:30:55 Download gff for
BO14613.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15572-PA | 1..791 | 17..808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 16:38:33 Download gff for
BO14613.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15572-RA | 327..1121 | 10..808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:40:16 Download gff for
BO14613.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15572-RA | 327..1121 | 10..808 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 11:40:16 Download gff for
BO14613.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 4269029..4269821 | 11..808 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 16:38:33 Download gff for
BO14613.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 4163062..4163854 | 11..808 | 99 | | Plus |
BO14613.complete Sequence
1489 bp (1489 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633196
> BO14613.complete
GAAGTTATCAGTCGACATGGAGGATTTGCATTTAAAACTCGGCGATCTGC
CCCAGGAAGTATTGGCTGCACGGCACAGCATGATTATGGGCCAAAAGTTG
GCTGGATCACTTGGTGAGACACAGCATCACCTTCAGCATCAACATCACCT
GAATCACCAACTGAACCAGCTCAATCAGTTGAGCCACTTGAATCAGTTCC
ATCAGTTAAACCAATTGAATCAATTGAGTCAGCTACACCAGCATATACAA
CATAAGATCTCTTCGGGGATGAACCTAAATTTGGATCTGGACCATAAGAT
GGAGACGGAGATGGAGTTGGGTCTGGGCCTTGATGTGGATGTGAATCTGG
GAGTTAATCTGGACATGAATCCGGAGGGCAGTATTACCAATAGTACCAGC
CGTACCAGCAGTGCTAGCAGGACCAGCAGCACCAACACGTGCAGCGATCA
GGGGCAAGGACATGGATCTGGGATTGGACTTGGTGACCCAAAGCGGGACC
AAAGCCAAGTCCACTACGCCCATGACCCTGCCCAGGATAATGGCGATTCA
CCGAATGTCAAGAGTTGTACTGGAATGTGCAGCCATCAAACAGAGAGCAA
TATGAATAAGGGGGATTCCCTAACGCATACCAAGTCTTCATCGCCGAAGA
CGGACAAGGGGGAGAAGGATAAGGAGGAGCTTAAAGCGAAGGAGGAGGAG
GAGGAGGAGTTTAAAGAGGATACGGAGGATAAGAAGGATAACGAGGACGT
TTTCCAGAAACAGGAACCGTCTTCTTCCATGTTGATTAAGGCGGCCAACT
CCAAGCTAAATGTCAATGCCACTGTTTACACGATGCCAGCCAAAGTAGAA
CCCCTTCATGACGGATCATTCGTGCCCCAACCGAGTTCCAGTGCCACCTC
ACAGGGCACTGGGGACTATCGCCTCAATGCCCAGGCTGCTGTATTCAAGC
CATCTTTGATGTGCATTTGCTCGTTGGCTTCGCCGGTGGTTTTGCAACGA
CTACGTCCGATTGTAGTACGGCCACCACTACCGGGGGTATCGCAACACCT
GATGTCGGACATTTCACAGCCTCTACTGCCGAACTCGCCACTGATGAGCC
ACGAGTTCTTAGCCCATGGTTTTCATCCAATGCAAAGGTCGGGCCATAAA
CCAAGTGGCCGCTGGCGCAAACAACCGCTTCCGGACTTGTTCAGCGCCGT
CATGTCACTGGTGACGGAACTGAAGCGATCGGTGAGCTATCCGGAGATCA
TAAGCTGCCTATCCAAGAGACTCCATCGAGCGGAGGTGGAACTGAAGCGC
CATGTACCGCACACATTGCACGCCGCCGTTAACAATGGCTATTTGAAGAA
GGAGGGCAATCGCTATTCCCTGCTCCCCGAAGTGGAACAGGCTGAGATCA
TGCGACGCAACATCGCGGATGCTCTTCGGGCCAAGGAGCTGGAGAAGGAG
CCGTTGTCCTGGCGCAGGCGTGCAAGCTTTCTAGACCAT
BO14613.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:55:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15572-RA | 1458 | CG15572-PA | 1..1455 | 17..1471 | 7275 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:55:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15572-RA | 2383 | CG15572-RA | 331..1785 | 17..1471 | 7275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:55:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 4269031..4270485 | 17..1471 | 7275 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 19:55:41 has no hits.
BO14613.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:18:54 Download gff for
BO14613.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15572-RA | 1..1458 | 17..1475 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:37:33 Download gff for
BO14613.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15572-RA | 327..1788 | 10..1475 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:00:58 Download gff for
BO14613.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15572-RA | 331..1785 | 17..1473 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:18:54 Download gff for
BO14613.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15572-RA | 327..1788 | 10..1475 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:10:58 Download gff for
BO14613.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15572-RA | 331..1785 | 17..1473 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:10:58 Download gff for
BO14613.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 4269031..4270485 | 17..1473 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:00:58 Download gff for
BO14613.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 4163064..4164518 | 17..1473 | 99 | | Plus |
BO14613.pep Sequence
Translation from 16 to 1489
> BO14613.pep
MEDLHLKLGDLPQEVLAARHSMIMGQKLAGSLGETQHHLQHQHHLNHQLN
QLNQLSHLNQFHQLNQLNQLSQLHQHIQHKISSGMNLNLDLDHKMETEME
LGLGLDVDVNLGVNLDMNPEGSITNSTSRTSSASRTSSTNTCSDQGQGHG
SGIGLGDPKRDQSQVHYAHDPAQDNGDSPNVKSCTGMCSHQTESNMNKGD
SLTHTKSSSPKTDKGEKDKEELKAKEEEEEEFKEDTEDKKDNEDVFQKQE
PSSSMLIKAANSKLNVNATVYTMPAKVEPLHDGSFVPQPSSSATSQGTGD
YRLNAQAAVFKPSLMCICSLASPVVLQRLRPIVVRPPLPGVSQHLMSDIS
QPLLPNSPLMSHEFLAHGFHPMQRSGHKPSGRWRKQPLPDLFSAVMSLVT
ELKRSVSYPEIISCLSKRLHRAEVELKRHVPHTLHAAVNNGYLKKEGNRY
SLLPEVEQAEIMRRNIADALRAKELEKEPLSWRRRASFLDH
BO14613.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:54:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15572-PA | 485 | CG15572-PA | 1..485 | 1..485 | 2534 | 100 | Plus |