Clone BO14613 Report

Search the DGRC for BO14613

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:146
Well:13
Vector:pDNR-Dual
Associated Gene/TranscriptCG15572-RA
Protein status:BO14613.pep: validated full length
Sequenced Size:1489

Clone Sequence Records

BO14613.5prime Sequence

811 bp (679 high quality bases) assembled on 2006-06-02

> BO14613.5prime
GAAGTTATCAGTCGACATGGAGGATTTGCATTTAAAACTCGGCGATCTGC
CCCAGGAAGTATTGGCTGCACGGCACAGCATGATTATGGGCCAAAAGTTG
GCTGGATCACTTGGTGAGACACAGCATCACCTTCAGCATCAACATCACCT
GAATCACCAACTGAACCAGCTCAATCAGTTGAGCCACTTGAATCAGTTCC
ATCAGTTAAACCAATTGAATCAATTGAGTCAGCTACACCAGCATATACAA
CATAAGATCTCTTCGGGGATGAACCTAAATTTGGATCTGGACCATAAGAT
GGAGACGGAGATGGAGTTGGGTCTGGGCCTTGATGTGGATGTGAATCTGG
GAGTTAATCTGGACATGAATCCGGAGGGCAGTATTACCAATAGTACCAGC
CGTACCAGCAGTGCTAGCAGGACCAGCAGCACCAACACGTGCAGCGATCA
GGGGCAAGGACATGGATCTGGGATTGGACTTGGTGACCCAAAGCGGGACC
AAAGCCAAGTCCACTACGCCCATGACCCTGCCCAGGATAATGGCGATTCA
CCGAATGTCAAGAGTTGTACTGGAATGTGCAGCCATCAAACAGAGAGCAA
TATGAATAAGGGGGATTCCCTAACGCATACCAAGTCTTCATCGCCGAAGA
CGGACAAGGGGGAGAAGGATAAGGAGGAGCTTAAAGCGAAGGAGGAGGAG
GAGGAGGAGTTTAAAGAGGATACGGAGGATAAGAAGGGATAACGAGGACG
TTTTTCAGAAACAGGAACCGTCTTCTTCCATGTTGATTAAGGCGGCCAAC
TCCAAGCTAAA

BO14613.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:25:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG15572-PA 1458 CG15572-RA 1..721 17..737 3605 100 Plus
CG15572-PA 1458 CG15572-RA 720..794 737..811 350 98.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 10:52:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG15572-RA 2383 CG15572-RA 331..1124 17..811 3935 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 10:51:58
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 4269031..4269824 17..811 3910 99.7 Plus
Blast to na_te.dros performed on 2015-02-09 10:52:01 has no hits.

BO14613.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:33:02 Download gff for BO14613.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15572-PA 1..791 17..808 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:30:55 Download gff for BO14613.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15572-PA 1..791 17..808 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 16:38:33 Download gff for BO14613.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15572-RA 327..1121 10..808 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:40:16 Download gff for BO14613.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15572-RA 327..1121 10..808 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 11:40:16 Download gff for BO14613.5prime
Subject Subject Range Query Range Percent Splice Strand
X 4269029..4269821 11..808 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 16:38:33 Download gff for BO14613.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 4163062..4163854 11..808 99   Plus

BO14613.complete Sequence

1489 bp (1489 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633196

> BO14613.complete
GAAGTTATCAGTCGACATGGAGGATTTGCATTTAAAACTCGGCGATCTGC
CCCAGGAAGTATTGGCTGCACGGCACAGCATGATTATGGGCCAAAAGTTG
GCTGGATCACTTGGTGAGACACAGCATCACCTTCAGCATCAACATCACCT
GAATCACCAACTGAACCAGCTCAATCAGTTGAGCCACTTGAATCAGTTCC
ATCAGTTAAACCAATTGAATCAATTGAGTCAGCTACACCAGCATATACAA
CATAAGATCTCTTCGGGGATGAACCTAAATTTGGATCTGGACCATAAGAT
GGAGACGGAGATGGAGTTGGGTCTGGGCCTTGATGTGGATGTGAATCTGG
GAGTTAATCTGGACATGAATCCGGAGGGCAGTATTACCAATAGTACCAGC
CGTACCAGCAGTGCTAGCAGGACCAGCAGCACCAACACGTGCAGCGATCA
GGGGCAAGGACATGGATCTGGGATTGGACTTGGTGACCCAAAGCGGGACC
AAAGCCAAGTCCACTACGCCCATGACCCTGCCCAGGATAATGGCGATTCA
CCGAATGTCAAGAGTTGTACTGGAATGTGCAGCCATCAAACAGAGAGCAA
TATGAATAAGGGGGATTCCCTAACGCATACCAAGTCTTCATCGCCGAAGA
CGGACAAGGGGGAGAAGGATAAGGAGGAGCTTAAAGCGAAGGAGGAGGAG
GAGGAGGAGTTTAAAGAGGATACGGAGGATAAGAAGGATAACGAGGACGT
TTTCCAGAAACAGGAACCGTCTTCTTCCATGTTGATTAAGGCGGCCAACT
CCAAGCTAAATGTCAATGCCACTGTTTACACGATGCCAGCCAAAGTAGAA
CCCCTTCATGACGGATCATTCGTGCCCCAACCGAGTTCCAGTGCCACCTC
ACAGGGCACTGGGGACTATCGCCTCAATGCCCAGGCTGCTGTATTCAAGC
CATCTTTGATGTGCATTTGCTCGTTGGCTTCGCCGGTGGTTTTGCAACGA
CTACGTCCGATTGTAGTACGGCCACCACTACCGGGGGTATCGCAACACCT
GATGTCGGACATTTCACAGCCTCTACTGCCGAACTCGCCACTGATGAGCC
ACGAGTTCTTAGCCCATGGTTTTCATCCAATGCAAAGGTCGGGCCATAAA
CCAAGTGGCCGCTGGCGCAAACAACCGCTTCCGGACTTGTTCAGCGCCGT
CATGTCACTGGTGACGGAACTGAAGCGATCGGTGAGCTATCCGGAGATCA
TAAGCTGCCTATCCAAGAGACTCCATCGAGCGGAGGTGGAACTGAAGCGC
CATGTACCGCACACATTGCACGCCGCCGTTAACAATGGCTATTTGAAGAA
GGAGGGCAATCGCTATTCCCTGCTCCCCGAAGTGGAACAGGCTGAGATCA
TGCGACGCAACATCGCGGATGCTCTTCGGGCCAAGGAGCTGGAGAAGGAG
CCGTTGTCCTGGCGCAGGCGTGCAAGCTTTCTAGACCAT

BO14613.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:55:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG15572-RA 1458 CG15572-PA 1..1455 17..1471 7275 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:55:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG15572-RA 2383 CG15572-RA 331..1785 17..1471 7275 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:55:40
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 4269031..4270485 17..1471 7275 100 Plus
Blast to na_te.dros performed on 2014-11-27 19:55:41 has no hits.

BO14613.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:18:54 Download gff for BO14613.complete
Subject Subject Range Query Range Percent Splice Strand
CG15572-RA 1..1458 17..1475 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:37:33 Download gff for BO14613.complete
Subject Subject Range Query Range Percent Splice Strand
CG15572-RA 327..1788 10..1475 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:00:58 Download gff for BO14613.complete
Subject Subject Range Query Range Percent Splice Strand
CG15572-RA 331..1785 17..1473 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:18:54 Download gff for BO14613.complete
Subject Subject Range Query Range Percent Splice Strand
CG15572-RA 327..1788 10..1475 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:10:58 Download gff for BO14613.complete
Subject Subject Range Query Range Percent Splice Strand
CG15572-RA 331..1785 17..1473 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:10:58 Download gff for BO14613.complete
Subject Subject Range Query Range Percent Splice Strand
X 4269031..4270485 17..1473 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:00:58 Download gff for BO14613.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 4163064..4164518 17..1473 99   Plus

BO14613.pep Sequence

Translation from 16 to 1489

> BO14613.pep
MEDLHLKLGDLPQEVLAARHSMIMGQKLAGSLGETQHHLQHQHHLNHQLN
QLNQLSHLNQFHQLNQLNQLSQLHQHIQHKISSGMNLNLDLDHKMETEME
LGLGLDVDVNLGVNLDMNPEGSITNSTSRTSSASRTSSTNTCSDQGQGHG
SGIGLGDPKRDQSQVHYAHDPAQDNGDSPNVKSCTGMCSHQTESNMNKGD
SLTHTKSSSPKTDKGEKDKEELKAKEEEEEEFKEDTEDKKDNEDVFQKQE
PSSSMLIKAANSKLNVNATVYTMPAKVEPLHDGSFVPQPSSSATSQGTGD
YRLNAQAAVFKPSLMCICSLASPVVLQRLRPIVVRPPLPGVSQHLMSDIS
QPLLPNSPLMSHEFLAHGFHPMQRSGHKPSGRWRKQPLPDLFSAVMSLVT
ELKRSVSYPEIISCLSKRLHRAEVELKRHVPHTLHAAVNNGYLKKEGNRY
SLLPEVEQAEIMRRNIADALRAKELEKEPLSWRRRASFLDH

BO14613.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:54:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG15572-PA 485 CG15572-PA 1..485 1..485 2534 100 Plus