BO14615.complete Sequence
1009 bp (1009 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633197
> BO14615.complete
GAAGTTATCAGTCGACATGAAGTCGATTCAGGCCCGGTTGAACCACCGAT
TCCGAAAAACTTTGGCGATGGACAAGCCGTCTAGCAGCAATAGCAATCGA
ATGAGCAGGAGCACTTCGAACTGCAGGAGCCCGGCCATAATACGTAGTCC
GCTGAACTCTGAGGAATTTCAGGACTCGGCAACGGCTGCCGCCACACAAC
AACGGCTTTTCTGGAGCGGCCAGCGGGCCTCGACGGCGGGCAGGGATGAT
AAAACCAAGCCTGATTCGACTGCCGCCGGAAAAAAGAAGCCACCTACGAC
GACAAGGCAGTCAAATTTTACCCAGACCGAACGAAGACGGACACATCGCA
AGCTGAGTCCGCGGAGCACGCGTTGCAATTCGGTGGCAGTTACGGCGCTG
GTCAGCAGAGAAAATATACCGCAAACATCCGGGTACAGAAGGCCAGAGGA
CCTAACCGCCCGGTGCAGTGCGTCGCACGAGGGGCGCAAGCTTCTGCAGG
AGCGGCTGATGGTGCGGGTGGACGCACTGTTCAACATGCTCTTCTCTGCC
TCGCCGTTCCTGCAGAGCTTCCATGAGCGGCGCAAGTCCACCGATCTGAA
TATGGGCGTCTGGGCGCGAAATGCCGGCGGCCAGAATCAGCGCACTGTCT
CAATGACTGTGGCACTTCAGGCGAACGTTGGTCCCAAAACTGCCAAAATT
ACCGAGACACAGACCATGCGCGAGTGCAGCCAACCCGGCCAACTGTACTC
GATCGATGTGCAGAGCGTTAACGCAGATATCCCCTACGCGGACACCTTCG
TCGTCCTGATGCACTTCTGCCTGAAGGCCACCGTGGAAGAGCACACGGAC
GTTTTGGTCTTTGCCGAGATCCAGTTTCTCAAGTCCGTGTGGGCAGTGGT
CAAGACCTTTATCGAGAGGAACGCGTACGCGGGTCTCGAGGAGTTCTGTC
AATCTCTATACAGCGCCCTACTGATTGAGATTAGGAAGATGGCAAGCTTT
CTAGACCAT
BO14615.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:37:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30284-RB | 978 | CG30284-PB | 1..975 | 17..991 | 4845 | 99.8 | Plus |
| CG30284-RA | 1062 | CG30284-PA | 499..1059 | 431..991 | 2805 | 100 | Plus |
| CG30284-RA | 1062 | CG30284-PA | 1..416 | 17..432 | 2050 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:37:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30284-RB | 1083 | CG30284-RB | 64..1038 | 17..991 | 4845 | 99.8 | Plus |
| CG30284-RA | 1180 | CG30284-RA | 575..1135 | 431..991 | 2805 | 100 | Plus |
| CG30284-RA | 1180 | CG30284-RA | 77..492 | 17..432 | 2050 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:37:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21650865..21651425 | 991..431 | 2805 | 100 | Minus |
| 2R | 25286936 | 2R | 21651508..21651923 | 432..17 | 2050 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:37:45 has no hits.
BO14615.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:18:55 Download gff for
BO14615.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30284-RB | 1..978 | 17..992 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:37:34 Download gff for
BO14615.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30284-RB | 64..1043 | 17..997 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:40:28 Download gff for
BO14615.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30284-RB | 64..1038 | 17..993 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:18:55 Download gff for
BO14615.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30284-RB | 64..1043 | 17..997 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:26:47 Download gff for
BO14615.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30284-RB | 64..1038 | 17..993 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:26:47 Download gff for
BO14615.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21650863..21651424 | 432..993 | 99 | <- | Minus |
| 2R | 21651509..21651923 | 17..431 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:40:28 Download gff for
BO14615.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17538368..17538929 | 432..993 | 99 | <- | Minus |
| arm_2R | 17539014..17539428 | 17..431 | 99 | | Minus |
BO14615.pep Sequence
Translation from 16 to 1009
> BO14615.pep
MKSIQARLNHRFRKTLAMDKPSSSNSNRMSRSTSNCRSPAIIRSPLNSEE
FQDSATAAATQQRLFWSGQRASTAGRDDKTKPDSTAAGKKKPPTTTRQSN
FTQTERRRTHRKLSPRSTRCNSVAVTALVSRENIPQTSGYRRPEDLTARC
SASHEGRKLLQERLMVRVDALFNMLFSASPFLQSFHERRKSTDLNMGVWA
RNAGGQNQRTVSMTVALQANVGPKTAKITETQTMRECSQPGQLYSIDVQS
VNADIPYADTFVVLMHFCLKATVEEHTDVLVFAEIQFLKSVWAVVKTFIE
RNAYAGLEEFCQSLYSALLIEIRKMASFLDH
BO14615.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:54:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30284-PB | 325 | CG30284-PB | 1..325 | 1..325 | 1655 | 100 | Plus |
| CG30284-PA | 353 | CG30284-PA | 1..353 | 1..325 | 1616 | 92.1 | Plus |
| CG34394-PG | 804 | CG34394-PG | 161..469 | 15..321 | 517 | 38.2 | Plus |
| CG34394-PA | 1138 | CG34394-PA | 596..904 | 15..321 | 517 | 38.2 | Plus |
| CG34394-PH | 1206 | CG34394-PH | 572..880 | 15..321 | 517 | 38.2 | Plus |
