Clone BO14619 Report

Search the DGRC for BO14619

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:146
Well:19
Vector:pDNR-Dual
Associated Gene/TranscriptCG18675-RA
Protein status:BO14619.pep: validated full length
Sequenced Size:907

Clone Sequence Records

BO14619.3prime Sequence

789 bp (733 high quality bases) assembled on 2006-06-16

> BO14619.3prime
ATGGTCTAGAAAGCTTGCTTTTCTGAATCGGAATCTAACATTTTCCAGAC
CATGCGCCTGACGTTTCAGACTGCCGCTGTCGGCCCAGGAGGAGTTGAGA
TACTCGTCGTCATCGTCTTGCTCAAGTTTCTTGAGTTCCTCCTGGCGGCG
ATAGGCCTCGGCCATCATCTGGCGACGCAAGGGATCGGAGATCACGGCTT
CGCGTCCCGGTGGTCCTTCACCAATTTGATTCAGCTTCACGACCACCTTG
GTTTTGTCGTTGTGACCCAAATAGTCGCTCATTAGCTTCCCCATCAGCAT
CTGGTGTCCTGCAAACCAGAACTGAGCCTTGGACGGTTCGATGACCTCCT
TGGAGGCCTGGGTGCCAGTCAGATCCTCGGTATTGGTGAACTCCATGCGT
ATGGAGTCGTGGGGCGGCAATTGCATGGGATATACAATAGTGACACCACC
ACGCAGGAGGTTCAACGCCTCCTCAACGATCTTTGGGGTCAAGGTCTTTG
AGGATTTAGCTAAGCGCCGATCCACCATAGCCTTGGCGTCGTTCATGGCA
CCTGCAAGGACCTTTTGCATCGCCTCAGTTGGCTGCTGTCCGTTACGGCG
AAGGAGCGGATCCTTGTTGATAGTGAAACCACCAGACGGGATGCACTTAT
CCGCCCAGACATCCTTAAGCTTGAGCTCTTCCCTCTGTTCCTCGTTGAGG
CCAATCATTTCAGGCGGCACCATGGTGCCATGTTCGGCCAGCTCCTCAAT
CTCCATGCAGACACGCTGAATCTTCAGTTGACCATTGTG

BO14619.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:25:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG18675-PA 876 CG18675-RA 103..873 789..19 3805 99.7 Minus
CG1232-PA 1359 tipE-RA 1295..1359 130..66 325 100 Minus
CG1232-PB 1359 tipE-RB 1295..1359 130..66 325 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:25:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG18675-RA 1608 CG18675-RA 172..942 789..19 3825 99.7 Minus
tipE-RB 3938 CG1232-RB 2341..2452 130..19 560 100 Minus
tipE-RA 3396 CG1232-RA 2487..2598 130..19 560 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:25:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4174393..4174665 517..245 1365 100 Minus
3L 28110227 3L 4174055..4174327 789..517 1350 99.6 Minus
3L 28110227 3L 4174724..4174842 248..130 580 99.2 Minus
3L 28110227 3L 4192190..4192302 131..19 565 100 Minus
Blast to na_te.dros performed on 2015-02-10 18:25:21 has no hits.

BO14619.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:33:08 Download gff for BO14619.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18675-PA 103..876 16..789 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:31:04 Download gff for BO14619.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18675-PA 103..876 16..789 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:47:53 Download gff for BO14619.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18675-RA 172..947 13..789 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:49:36 Download gff for BO14619.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18675-RA 172..947 13..789 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:49:36 Download gff for BO14619.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 4192192..4192307 13..129 97   Minus
3L 4174055..4174327 517..789 99 -> Minus
3L 4174394..4174663 247..516 100 -> Minus
3L 4174726..4174842 130..246 99 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:47:53 Download gff for BO14619.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4174055..4174327 517..789 99 -> Minus
arm_3L 4174394..4174663 247..516 100 -> Minus
arm_3L 4174726..4174842 130..246 99 -> Minus
arm_3L 4192192..4192307 13..129 97   Minus

BO14619.5prime Sequence

868 bp (788 high quality bases) assembled on 2006-06-16

> BO14619.5prime
GAAGTTATCAGTCGACATGGTGCTTCTCCAGGTGAAACGCGGAGACGAGC
TTATCTTCCTCTATGAGACAAGCGTTAAGGAGAAGACCGATACTGTGCTT
CGCGAGCTTGTGGCTCTGCACAATGGTCAACTGAAGATTCAGCGTGTCTG
CATGGAGATTGAGGAGCTGGCCGAACATGGCACCATGGTGCCGCCTGAAA
TGATTGGCCTCAACGAGGAACAGAGGGAAGAGCTCAAGCTTAAGGATGTC
TGGGCGGATAAGTGCATCCCGTCTGGTGGTTTCACTATCAACAAGGATCC
GCTCCTTCGCCGTAACGGACAGCAGCCAACTGAGGCGATGCAAAAGGTCC
TTGCAGGTGCCATGAACGACGCCAAGGCTATGGTGGATCGGCGCTTAGCT
AAATCCTCAAAGACCTTGACCCCAAAGATCGTTGAGGAGGCGTTGAACCT
CCTGCGTGGTGGTGTCACTATTGTATATCCCATGCAATTGCCGCCCCACG
ACTCCATACGCATGGAGTTCACCAATACCGAGGATCTGACTGGCACCCAG
GCCTCCAAGGAGGTCATCGAACCGTCCAAGGCTCAGTTCTGGTTTGCAGG
ACACCAGATGCTGATGGGGAAGCTAATGAGCGACTATTTGGGTCACAACG
ACAAAACCAAGGTGGTCGTGAAGCTGAATCAAATTGGTGAAGGACCACCG
GGACGCGAAGCCGTGATCTCCGATCCCTTGCGTCGCCAGATGATGGCCGA
GGCCTATCGCCGCCAGGAGGAACTCAAGAAACTTGAGCAAGACGATGACG
ACGAGTATCTCAACTCCTCCTGGGCCGACAGCGGCAGTCTGAAACGTCAG
GCGCATGGTCTGGAAAAT

BO14619.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:25:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG18675-PA 876 CG18675-RA 1..852 17..868 4160 99.5 Plus
CG1232-PA 1359 tipE-RA 1295..1359 778..842 325 100 Plus
CG1232-PB 1359 tipE-RB 1295..1359 778..842 325 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:07:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG18675-RA 1608 CG18675-RA 66..921 13..868 4205 99.4 Plus
tipE-RB 3938 CG1232-RB 2341..2431 778..868 455 100 Plus
tipE-RA 3396 CG1232-RA 2487..2577 778..868 455 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 19:07:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4173949..4174327 13..391 1835 98.9 Plus
3L 28110227 3L 4174393..4174665 391..663 1365 100 Plus
3L 28110227 3L 4174724..4174842 660..778 580 99.2 Plus
3L 28110227 3L 4192190..4192281 777..868 460 100 Plus
Blast to na_te.dros performed on 2015-02-11 19:07:56 has no hits.

BO14619.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:33:09 Download gff for BO14619.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18675-PA 1..852 17..868 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:31:05 Download gff for BO14619.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18675-PA 1..852 17..868 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 13:57:10 Download gff for BO14619.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18675-RA 57..921 5..868 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:01:25 Download gff for BO14619.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18675-RA 57..921 5..868 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:01:25 Download gff for BO14619.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 4174394..4174663 392..661 100 -> Plus
3L 4174726..4174842 662..778 99 -> Plus
3L 4192192..4192281 779..868 100   Plus
3L 4173940..4174327 5..391 98 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 13:57:10 Download gff for BO14619.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4173940..4174327 5..391 98 -> Plus
arm_3L 4174394..4174663 392..661 100 -> Plus
arm_3L 4174726..4174842 662..778 99 -> Plus
arm_3L 4192192..4192281 779..868 100   Plus

BO14619.complete Sequence

907 bp (907 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633200

> BO14619.complete
GAAGTTATCAGTCGACATGGTGCTTCTCCAGGTGAAACGCGGAGACGAGC
TTATCTTCCTCTATGAGACAAGCGTTAAGGAGAAGACCGATACTGTGCTT
CGCGAGCTTGTGGCTCTGCACAATGGTCAACTGAAGATTCAGCGTGTCTG
CATGGAGATTGAGGAGCTGGCCGAACATGGCACCATGGTGCCGCCTGAAA
TGATTGGCCTCAACGAGGAACAGAGGGAAGAGCTCAAGCTTAAGGATGTC
TGGGCGGATAAGTGCATCCCGTCTGGTGGTTTCACTATCAACAAGGATCC
GCTCCTTCGCCGTAACGGACAGCAGCCAACTGAGGCGATGCAAAAGGTCC
TTGCAGGTGCCATGAACGACGCCAAGGCTATGGTGGATCGGCGCTTAGCT
AAATCCTCAAAGACCTTGACCCCAAAGATCGTTGAGGAGGCGTTGAACCT
CCTGCGTGGTGGTGTCACTATTGTATATCCCATGCAATTGCCGCCCCACG
ACTCCATACGCATGGAGTTCACCAATACCGAGGATCTGACTGGCACCCAG
GCCTCCAAGGAGGTCATCGAACCGTCCAAGGCTCAGTTCTGGTTTGCAGG
ACACCAGATGCTGATGGGGAAGCTAATGAGCGACTATTTGGGTCACAACG
ACAAAACCAAGGTGGTCGTGAAGCTGAATCAAATTGGTGAAGGACCACCG
GGACGCGAAGCCGTGATCTCCGATCCCTTGCGTCGCCAGATGATGGCCGA
GGCCTATCGCCGCCAGGAGGAACTCAAGAAACTTGAGCAAGACGATGACG
ACGAGTATCTCAACTCCTCCTGGGCCGACAGCGGCAGTCTGAAACGTCAG
GCGCATGGTCTGGAAAATGTTAGATTCCGATTCAGAAAAGCAAGCTTTCT
AGACCAT

BO14619.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:15:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG18675-RA 876 CG18675-PA 1..873 17..889 4305 99.5 Plus
tipE-RB 1359 CG1232-PB 1295..1359 778..842 325 100 Plus
tipE-RA 1359 CG1232-PA 1295..1359 778..842 325 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:15:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG18675-RA 1608 CG18675-RA 66..942 13..889 4310 99.4 Plus
tipE-RB 3938 CG1232-RB 2341..2452 778..889 560 100 Plus
tipE-RA 3396 CG1232-RA 2487..2598 778..889 560 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:15:38
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4173949..4174327 13..391 1835 98.9 Plus
3L 28110227 3L 4174393..4174665 391..663 1365 100 Plus
3L 28110227 3L 4174724..4174842 660..778 580 99.2 Plus
3L 28110227 3L 4192190..4192302 777..889 565 100 Plus
Blast to na_te.dros performed on 2014-11-28 08:15:38 has no hits.

BO14619.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:18:57 Download gff for BO14619.complete
Subject Subject Range Query Range Percent Splice Strand
CG18675-RA 1..876 17..892 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:50:17 Download gff for BO14619.complete
Subject Subject Range Query Range Percent Splice Strand
CG18675-RA 101..969 17..885 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:46 Download gff for BO14619.complete
Subject Subject Range Query Range Percent Splice Strand
CG18675-RA 70..938 17..885 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:18:57 Download gff for BO14619.complete
Subject Subject Range Query Range Percent Splice Strand
CG18675-RA 88..978 5..895 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:14:14 Download gff for BO14619.complete
Subject Subject Range Query Range Percent Splice Strand
CG18675-RA 70..938 17..885 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:14:14 Download gff for BO14619.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4173953..4174327 17..391 99 -> Plus
3L 4174394..4174663 392..661 100 -> Plus
3L 4174726..4174842 662..778 99 -> Plus
3L 4192192..4192298 779..885 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:46 Download gff for BO14619.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4173953..4174327 17..391 99 -> Plus
arm_3L 4174394..4174663 392..661 100 -> Plus
arm_3L 4174726..4174842 662..778 99 -> Plus
arm_3L 4192192..4192298 779..885 100   Plus

BO14619.pep Sequence

Translation from 16 to 907

> BO14619.pep
MVLLQVKRGDELIFLYETSVKEKTDTVLRELVALHNGQLKIQRVCMEIEE
LAEHGTMVPPEMIGLNEEQREELKLKDVWADKCIPSGGFTINKDPLLRRN
GQQPTEAMQKVLAGAMNDAKAMVDRRLAKSSKTLTPKIVEEALNLLRGGV
TIVYPMQLPPHDSIRMEFTNTEDLTGTQASKEVIEPSKAQFWFAGHQMLM
GKLMSDYLGHNDKTKVVVKLNQIGEGPPGREAVISDPLRRQMMAEAYRRQ
EELKKLEQDDDDEYLNSSWADSGSLKRQAHGLENVRFRFRKASFLDH

BO14619.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:54:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG18675-PA 291 CG18675-PA 1..291 1..291 1495 100 Plus