Clone BO14635 Report

Search the DGRC for BO14635

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:146
Well:35
Vector:pDNR-Dual
Associated Gene/TranscriptCG4286-RA
Protein status:BO14635.pep: validated full length
Sequenced Size:691

Clone Sequence Records

BO14635.3prime Sequence

689 bp (685 high quality bases) assembled on 2006-06-16

> BO14635.3prime
ATGGTCTAGAAAGCTTGCCATAATGGTCTCCTCCTCCAGCATGTACTCCG
TGAGATCGGCTTCGCCCGACAGCATGGTCACCGGCACCCGGTTCATCTGG
GCCACCCGTTGACTGGGCCAGACCATCACATCGCAACAGTTGGTCAACAC
GACCACATTGGTGCTCGGCGTGTTGGTGCACATCAGGTTGCCGGCCTTCT
CCTGGTCGCACTTGTTGAACTTGCGCCGGAAACGGAACTTCACGGGCAAC
GAGTTGCCCATCACGCTCTCTTCATCGAAGTACGGCGGCAGGGATTTGTT
GAAAGCCGGATTTGTGATGGCCGGCTTGGTTAGCTCTTCGAGAACCACGG
AGGTCTTGAGTCGGCGACAGGGATCACAGTAGTCGGAGGCCAATGTGTTC
TCCGGTGTCTTGGTAGCACATGGATCCGGCTTGGGTTCGGGCACATTGGA
TCCCAAACCACTACCATGTGGCCCACTGTCACTGTCACGTTTACCCTTCG
GATTCATGGGATCCTGGCCGCGTAATACGCACTCCTGCAGGAACTCCTCC
TCGATGTCGATCAGTTTCTTGATGGCACAGTCCCGCTTCAGGAAGTTCTT
GATCACGGACAGATTGCGGGGCACGGCGCCGATAACGTCGAAGTCATCGC
TACGGAGCTGGAGGCGGTGCGCCATGTCGACTGATAACT

BO14635.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:25:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG4286-PA 660 CG4286-RA 1..657 675..19 3185 99.3 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:37:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG4286-RA 821 CG4286-RA 99..756 676..19 3230 99.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:37:04
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21178196..21178538 334..676 1670 99.1 Plus
2R 25286936 2R 21177819..21178135 19..335 1570 99.7 Plus
Blast to na_te.dros performed on 2015-01-31 10:37:07 has no hits.

BO14635.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:33:22 Download gff for BO14635.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4286-PA 1..660 16..675 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:31:23 Download gff for BO14635.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4286-PA 1..660 16..675 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:41:23 Download gff for BO14635.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4286-RA 96..756 19..682 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:49:33 Download gff for BO14635.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4286-RA 96..756 19..682 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:49:33 Download gff for BO14635.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 21177819..21178133 19..333 99 <- Plus
2R 21178196..21178541 334..682 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:41:23 Download gff for BO14635.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17065324..17065638 19..333 99 <- Plus
arm_2R 17065701..17066046 334..682 98   Plus

BO14635.5prime Sequence

689 bp (689 high quality bases) assembled on 2006-06-16

> BO14635.5prime
GAAGTTATCAGTCGACATGGCGCACCGCCTCCAGCTCCGTAGCGATGACT
TCGACGTTATCGGCGCCGTGCCCCGCAATCTGTCCGTGATCAAGAACTTC
CTGAAGCGGGACTGTGCCATCAAGAAACTGATCGACATCGAGGAGGAGTT
CCTGCAGGAGTGCGTATTACGCGGCCAGGATCCCATGAATCCGAAGGGTA
AACGTGACAGTGACAGTGGGCCACATGGTAGTGGTTTGGGATCCAATGTG
CCCGAACCCAAGCCGGATCCATGTGCTACCAAGACACCGGAGAACACATT
GGCCTCCGACTACTGTGATCCCTGTCGCCGACTCAAGACCTCCGTGGTTC
TCGAAGAGCTAACCAAGCCGGCCATCACAAATCCGGCTTTCAACAAATCC
CTGCCGCCGTACTTCGATGAAGAGAGCGTGATGGGCAACTCGTTGCCCGT
GAAGTTCCGTTTCCGGCGCAAGTTCAACAAGTGCGACCAGGAGAAGGCCG
GCAACCTGATGTGCACCAACACGCCGAGCACCAATGTGGTCGTGTTGACC
AACTGTTGCGATGTGATGGTCTGGCCCAGTCAACGGGTGGCCCAGATGAA
CCGGGTGCCGGTGACCATGCTGTCGGGCGAAGCCGATCTCACGGAGTACA
TGCTGGAGGAGGAGACCATTATGGCAAGCTTTCTAGACC

BO14635.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:25:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG4286-PA 660 CG4286-RA 1..657 17..673 3185 99.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:03:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG4286-RA 821 CG4286-RA 99..756 16..673 3230 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:03:05
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21178196..21178538 358..16 1670 99.1 Minus
2R 25286936 2R 21177819..21178135 673..357 1570 99.7 Minus
Blast to na_te.dros performed on 2015-02-12 00:03:09 has no hits.

BO14635.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:33:23 Download gff for BO14635.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4286-PA 1..660 17..676 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:31:25 Download gff for BO14635.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4286-PA 1..660 17..676 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:56:51 Download gff for BO14635.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4286-RA 96..756 10..673 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:55:32 Download gff for BO14635.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4286-RA 96..756 10..673 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:55:32 Download gff for BO14635.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 21177819..21178133 359..673 99 <- Minus
2R 21178196..21178541 10..358 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:56:51 Download gff for BO14635.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17065324..17065638 359..673 99 <- Minus
arm_2R 17065701..17066046 10..358 98   Minus

BO14635.complete Sequence

691 bp (691 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633207

> BO14635.complete
GAAGTTATCAGTCGACATGGCGCACCGCCTCCAGCTCCGTAGCGATGACT
TCGACGTTATCGGCGCCGTGCCCCGCAATCTGTCCGTGATCAAGAACTTC
CTGAAGCGGGACTGTGCCATCAAGAAACTGATCGACATCGAGGAGGAGTT
CCTGCAGGAGTGCGTATTACGCGGCCAGGATCCCATGAATCCGAAGGGTA
AACGTGACAGTGACAGTGGGCCACATGGTAGTGGTTTGGGATCCAATGTG
CCCGAACCCAAGCCGGATCCATGTGCTACCAAGACACCGGAGAACACATT
GGCCTCCGACTACTGTGATCCCTGTCGCCGACTCAAGACCTCCGTGGTTC
TCGAAGAGCTAACCAAGCCGGCCATCACAAATCCGGCTTTCAACAAATCC
CTGCCGCCGTACTTCGATGAAGAGAGCGTGATGGGCAACTCGTTGCCCGT
GAAGTTCCGTTTCCGGCGCAAGTTCAACAAGTGCGACCAGGAGAAGGCCG
GCAACCTGATGTGCACCAACACGCCGAGCACCAATGTGGTCGTGTTGACC
AACTGTTGCGATGTGATGGTCTGGCCCAGTCAACGGGTGGCCCAGATGAA
CCGGGTGCCGGTGACCATGCTGTCGGGCGAAGCCGATCTCACGGAGTACA
TGCTGGAGGAGGAGACCATTATGGCAAGCTTTCTAGACCAT

BO14635.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:05:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG4286-RA 660 CG4286-PA 1..657 17..673 3225 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:05:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG4286-RA 821 CG4286-RA 99..756 16..673 3230 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:05:08
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21178196..21178538 358..16 1670 99.1 Minus
2R 25286936 2R 21177819..21178135 673..357 1570 99.7 Minus
Blast to na_te.dros performed on 2014-11-28 00:05:09 has no hits.

BO14635.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:18:20 Download gff for BO14635.complete
Subject Subject Range Query Range Percent Splice Strand
CG4286-RA 1..660 17..676 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:37:18 Download gff for BO14635.complete
Subject Subject Range Query Range Percent Splice Strand
CG4286-RA 96..756 10..673 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:45:13 Download gff for BO14635.complete
Subject Subject Range Query Range Percent Splice Strand
CG4286-RA 100..756 17..675 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:18:20 Download gff for BO14635.complete
Subject Subject Range Query Range Percent Splice Strand
CG4286-RA 96..756 10..673 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:14:13 Download gff for BO14635.complete
Subject Subject Range Query Range Percent Splice Strand
CG4286-RA 100..756 17..675 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:14:13 Download gff for BO14635.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21177816..21178133 359..675 99 <- Minus
2R 21178196..21178537 17..358 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:45:13 Download gff for BO14635.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17065321..17065638 359..675 99 <- Minus
arm_2R 17065701..17066042 17..358 99   Minus

BO14635.pep Sequence

Translation from 16 to 691

> BO14635.pep
MAHRLQLRSDDFDVIGAVPRNLSVIKNFLKRDCAIKKLIDIEEEFLQECV
LRGQDPMNPKGKRDSDSGPHGSGLGSNVPEPKPDPCATKTPENTLASDYC
DPCRRLKTSVVLEELTKPAITNPAFNKSLPPYFDEESVMGNSLPVKFRFR
RKFNKCDQEKAGNLMCTNTPSTNVVVLTNCCDVMVWPSQRVAQMNRVPVT
MLSGEADLTEYMLEEETIMASFLDH

BO14635.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:55:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG4286-PA 219 CG4286-PA 1..219 1..219 1165 100 Plus
CG30278-PC 275 CG30278-PC 96..221 92..217 172 33.1 Plus
CG30278-PB 275 CG30278-PB 96..221 92..217 172 33.1 Plus
CG30278-PA 275 CG30278-PA 96..221 92..217 172 33.1 Plus