Clone Sequence Records
BO14636.3prime Sequence
560 bp (560 high quality bases) assembled on 2006-06-02
> BO14636.3prime
ATGGTCTAGAAAGCTTGCGCTAGTTGCAGTGGCCTGCTGAGCACCCGGAA
ATCCAAATCCGGAAGAGTTGAAGTCACCGTATCCTTCATTGGCATCAGGC
ATGATATGCGGTTCACGATTTCGGAACTGTTCCGCCGCGAAACGTGTAAA
AAATATGCCTAAGCCCTCGATCATTGAGAGCAGTACGCCACCGATAATTG
CACTTCCAGCCATGGCCGCCGCTCCATTGCGTGAGGCCAGAATTCCACCA
GTAACTGCTCCGCTCACTATCGAGTTCCAGGGATCCTCCTTTTGGCGAAA
GTGGACCAGACTGCAGTCCACAATGCTGAACACTGCACCCCAGGCGGCGA
AACTTCCACCTATCACCGGAGATTTGGTCTTGATGGCAGCCACACTGCCG
GCGACCCTGCGTCCTAGTCCCTGTGGTGCGTTCCGGAATCCCTTCAGTCC
CTGAAAGAGCCCGCCTCCAACGCAGCCCATGATAAAGGCTCCTCCGCAGT
CGTCGACGATGCGATGGGGACACGGTTCCCGCGAATACTCCTCCATGTCG
ACTGATAACT
BO14636.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:25:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15257-PA | 531 | Tim17b2-RA | 1..528 | 546..19 | 2590 | 99.6 | Minus |
CG15257-PB | 1437 | Tim17b2-RB | 1..503 | 546..44 | 2465 | 99.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:37:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tim17b2-RC | 817 | CG15257-RC | 109..636 | 546..19 | 2610 | 99.6 | Minus |
Tim17b2-RA | 761 | CG15257-RA | 109..636 | 546..19 | 2610 | 99.6 | Minus |
CG1724-RA | 843 | CG1724-RA | 125..521 | 551..155 | 665 | 78.1 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:36:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 15484837..15485364 | 546..19 | 2610 | 99.6 | Minus |
X | 23542271 | X | 21202821..21203217 | 155..551 | 650 | 77.6 | Plus |
3R | 32079331 | 3R | 12364287..12364372 | 245..330 | 190 | 81.4 | Plus |
Blast to na_te.dros performed on 2015-01-31 10:36:57 has no hits.
BO14636.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:33:24 Download gff for
BO14636.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15257-PA | 1..531 | 15..546 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:31:26 Download gff for
BO14636.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15257-PA | 1..531 | 15..546 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:41:21 Download gff for
BO14636.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tim17b2-RA | 100..642 | 11..553 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:49:31 Download gff for
BO14636.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tim17b2-RA | 100..642 | 11..553 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:49:31 Download gff for
BO14636.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 15484828..15485370 | 11..553 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:41:21 Download gff for
BO14636.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 15484828..15485370 | 11..553 | 98 | | Minus |
BO14636.5prime Sequence
560 bp (560 high quality bases) assembled on 2006-06-02
> BO14636.5prime
GAAGTTATCAGTCGACATGGAGGAGTATTCGCGGGAACCGTGTCCCCATC
GCATCGTCGACGACTGCGGAGGAGCCTTTATCATGGGCTGCGTTGGAGGC
GGGCTCTTTCAGGGACTGAAGGGATTCCGGAACGCACCACAGGGACTAGG
ACGCAGGGTCGCCGGCAGTGTGGCTGCCATCAAGACCAAATCTCCGGTGA
TAGGTGGAAGTTTCGCCGCCTGGGGTGCAGTGTTCAGCATTGTGGACTGC
AGTCTGGTCCACTTTCGCCAAAAGGAGGATCCCTGGAACTCGATAGTGAG
CGGAGCAGTTACTGGTGGAATTCTGGCCTCACGCAATGGAGCGGCGGCCA
TGGCTGGAAGTGCAATTATCGGTGGCGTACTGCTCTCAATGATCGAGGGC
TTAGGCATATTTTTTACACGTTTCGCGGCGGAACAGTTCCGAAATCGTGA
ACCGCATATCATGCCTGATGCCAATGAAGGATACGGTGACTTCAACTCTT
CCGGATTTGGATTTCCGGGTGCTCAGCAGGCCACTGCAACTAGCGCAAGC
TTTCTAGACC
BO14636.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:25:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15257-PA | 531 | Tim17b2-RA | 1..528 | 17..544 | 2590 | 99.6 | Plus |
CG15257-PB | 1437 | Tim17b2-RB | 1..503 | 17..519 | 2465 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:06:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tim17b2-RC | 817 | CG15257-RC | 109..636 | 17..544 | 2610 | 99.6 | Plus |
Tim17b2-RA | 761 | CG15257-RA | 109..636 | 17..544 | 2610 | 99.6 | Plus |
CG1724-RA | 843 | CG1724-RA | 125..521 | 12..408 | 665 | 78.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 19:06:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 15484837..15485364 | 17..544 | 2610 | 99.6 | Plus |
X | 23542271 | X | 21202821..21203217 | 408..12 | 650 | 77.6 | Minus |
3R | 32079331 | 3R | 12364287..12364372 | 318..233 | 190 | 81.4 | Minus |
Blast to na_te.dros performed on 2015-02-11 19:06:06 has no hits.
BO14636.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:33:24 Download gff for
BO14636.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15257-PA | 1..531 | 17..548 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:31:28 Download gff for
BO14636.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15257-PA | 1..531 | 17..548 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 13:56:34 Download gff for
BO14636.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tim17b2-RA | 100..642 | 10..552 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:55:39 Download gff for
BO14636.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tim17b2-RA | 100..642 | 10..552 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 23:55:39 Download gff for
BO14636.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 15484828..15485370 | 10..552 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 13:56:34 Download gff for
BO14636.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 15484828..15485370 | 10..552 | 98 | | Plus |
BO14636.complete Sequence
562 bp (562 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633208
> BO14636.complete
GAAGTTATCAGTCGACATGGAGGAGTATTCGCGGGAACCGTGTCCCCATC
GCATCGTCGACGACTGCGGAGGAGCCTTTATCATGGGCTGCGTTGGAGGC
GGGCTCTTTCAGGGACTGAAGGGATTCCGGAACGCACCACAGGGACTAGG
ACGCAGGGTCGCCGGCAGTGTGGCTGCCATCAAGACCAAATCTCCGGTGA
TAGGTGGAAGTTTCGCCGCCTGGGGTGCAGTGTTCAGCATTGTGGACTGC
AGTCTGGTCCACTTTCGCCAAAAGGAGGATCCCTGGAACTCGATAGTGAG
CGGAGCAGTTACTGGTGGAATTCTGGCCTCACGCAATGGAGCGGCGGCCA
TGGCTGGAAGTGCAATTATCGGTGGCGTACTGCTCTCAATGATCGAGGGC
TTAGGCATATTTTTTACACGTTTCGCGGCGGAACAGTTCCGAAATCGTGA
ACCGCATATCATGCCTGATGCCAATGAAGGATACGGTGACTTCAACTCTT
CCGGATTTGGATTTCCGGGTGCTCAGCAGGCCACTGCAACTAGCGCAAGC
TTTCTAGACCAT
BO14636.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:41:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tim17b2-RC | 531 | CG15257-PC | 1..528 | 17..544 | 2610 | 99.6 | Plus |
Tim17b2-RA | 531 | CG15257-PA | 1..528 | 17..544 | 2610 | 99.6 | Plus |
CG1724-RA | 558 | CG1724-PA | 1..392 | 17..408 | 640 | 77.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:41:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tim17b2-RC | 817 | CG15257-RC | 109..636 | 17..544 | 2610 | 99.6 | Plus |
Tim17b2-RA | 761 | CG15257-RA | 109..636 | 17..544 | 2610 | 99.6 | Plus |
CG1724-RA | 843 | CG1724-RA | 125..521 | 12..408 | 650 | 77.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:41:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 15484837..15485364 | 17..544 | 2610 | 99.6 | Plus |
X | 23542271 | X | 21202821..21203217 | 408..12 | 650 | 77.6 | Minus |
3R | 32079331 | 3R | 12364287..12364372 | 318..233 | 190 | 81.4 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:41:22 has no hits.
BO14636.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:18:21 Download gff for
BO14636.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tim17b2-RA | 1..531 | 17..548 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:37:20 Download gff for
BO14636.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tim17b2-RA | 61..603 | 10..552 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:48:42 Download gff for
BO14636.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tim17b2-RA | 109..636 | 17..546 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:18:21 Download gff for
BO14636.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tim17b2-RA | 61..603 | 10..552 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:13:58 Download gff for
BO14636.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tim17b2-RA | 109..636 | 17..546 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:13:58 Download gff for
BO14636.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 15484837..15485364 | 17..546 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:48:42 Download gff for
BO14636.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 15484837..15485364 | 17..546 | 99 | | Plus |
BO14636.pep Sequence
Translation from 16 to 562
> BO14636.pep
MEEYSREPCPHRIVDDCGGAFIMGCVGGGLFQGLKGFRNAPQGLGRRVAG
SVAAIKTKSPVIGGSFAAWGAVFSIVDCSLVHFRQKEDPWNSIVSGAVTG
GILASRNGAAAMAGSAIIGGVLLSMIEGLGIFFTRFAAEQFRNREPHIMP
DANEGYGDFNSSGFGFPGAQQATATSASFLDH
BO14636.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:55:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tim17b2-PC | 176 | CG15257-PC | 1..176 | 1..176 | 924 | 100 | Plus |
Tim17b2-PA | 176 | CG15257-PA | 1..176 | 1..176 | 924 | 100 | Plus |
CG1724-PA | 185 | CG1724-PA | 1..185 | 1..176 | 686 | 73 | Plus |
Tim17b-PB | 173 | CG40451-PB | 1..146 | 1..146 | 613 | 74 | Plus |
Tim17b-PA | 173 | CG40451-PA | 1..146 | 1..146 | 613 | 74 | Plus |