Clone Sequence Records
BO14637.3prime Sequence
476 bp (476 high quality bases) assembled on 2006-06-02
> BO14637.3prime
CCTTGGGGGGGCGCCAAACGAATGGTCTAGAAAGCTTGCGAACAACGTCG
CCTCGAGGACCTTAGCTAGGGCACGAAGATTGGGTCCGTCGATTTTCTTG
AGACCCAGGCCCACCACGAACTCCGTCGGGCACTTGTGGAGTCCGGTTCT
GTTGACCAGAAACTGTATGGCGCTGCGAGTCTCGTCGGTGTCCAAGCCCA
AGCAGCAGTTCATCGTGATTGGCACCGATACGTGGAACTCCGGATTGTCC
ACGGGTCCGTGCAAATAGGGAACCACTCTTTCGTCCTTTTTGACATCGAA
GTGCACGTTGTAGATGCCGGGAATCTTGCCGAGCTGCGTTATGACTAAGA
ACCACTTCTTGGCAAAGCAGTGGAACACTATCTCCGTGGGAACGCCGTTC
ACGTCCGCTGAGAACTGCCTGTCGAATCCGATTTGTCGAGGTTTGTTTGC
TGTGTGATTCATGTCGACTGATAACT
BO14637.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:25:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11885-PA | 426 | CG11885-RA | 1..419 | 462..44 | 2020 | 99.2 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:28:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11885-RA | 556 | CG11885-RA | 85..507 | 462..40 | 2055 | 99.1 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:28:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 420944..421366 | 40..462 | 2055 | 99.1 | Plus |
Blast to na_te.dros performed on 2015-02-10 22:28:18 has no hits.
BO14637.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:33:25 Download gff for
BO14637.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11885-PA | 1..426 | 39..462 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:31:29 Download gff for
BO14637.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11885-PA | 1..426 | 39..462 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:11:49 Download gff for
BO14637.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11885-RA | 85..507 | 40..462 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:02:21 Download gff for
BO14637.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11885-RA | 85..507 | 40..462 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:02:21 Download gff for
BO14637.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 420944..421366 | 40..462 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:11:49 Download gff for
BO14637.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 420944..421366 | 40..462 | 99 | | Plus |
BO14637.5prime Sequence
455 bp (455 high quality bases) assembled on 2006-06-02
> BO14637.5prime
GAAGTTATCAGTCGACATGAATCACACAGCAAACAAACCTCGACAAATCG
GATTCGACAGGCAGTTCTCAGCGGACGTGAACGGCGTTCCCACGGAGATA
GTGTTCCACTGCTTTGCCAAGAAGTGGTTCTTAGTCATAACGCAGCTCGG
CAAGATTCCCGGCATCTACAACGTGCACTTCGATGTCAAAAAGGACGAAA
GAGTGGTTCCCTATTTGCACGGACCCGTGGACAATCCGGAGTTCCACGTA
TCGGTGCCAATCACGATGAACTGCTGCTTGGGCTTGGACACCGACGAGAC
TCGCAGCGCCATACAGTTTCTGGTCAACAGAACCGGACTCCACAAGTGCC
CGACGGAGTTCGTGGTGGGCCTGGGTCTCAAGAAAATCGACGGACCCAAT
CTTCGTGCCCTAGCTAAGGTCCTCGAGGAGACGTTATTCGCAAGCTTTCT
AGACC
BO14637.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:25:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11885-PA | 426 | CG11885-RA | 1..423 | 17..439 | 2065 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 01:51:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11885-RA | 556 | CG11885-RA | 85..507 | 17..439 | 2085 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 01:51:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 420944..421366 | 439..17 | 2085 | 99.5 | Minus |
Blast to na_te.dros performed on 2015-02-04 01:51:14 has no hits.
BO14637.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:33:26 Download gff for
BO14637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11885-PA | 1..426 | 17..440 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:31:30 Download gff for
BO14637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11885-PA | 1..426 | 17..440 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 20:40:14 Download gff for
BO14637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11885-RA | 85..507 | 17..439 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:17:42 Download gff for
BO14637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11885-RA | 85..507 | 17..439 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:17:42 Download gff for
BO14637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 420944..421366 | 17..439 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 20:40:14 Download gff for
BO14637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 420944..421366 | 17..439 | 99 | | Minus |
BO14637.complete Sequence
457 bp (457 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633209
> BO14637.complete
GAAGTTATCAGTCGACATGAATCACACAGCAAACAAACCTCGACAAATCG
GATTCGACAGGCAGTTCTCAGCGGACGTGAACGGCGTTCCCACGGAGATA
GTGTTCCACTGCTTTGCCAAGAAGTGGTTCTTAGTCATAACGCAGCTCGG
CAAGATTCCCGGCATCTACAACGTGCACTTCGATGTCAAAAAGGACGAAA
GAGTGGTTCCCTATTTGCACGGACCCGTGGACAATCCGGAGTTCCACGTA
TCGGTGCCAATCACGATGAACTGCTGCTTGGGCTTGGACACCGACGAGAC
TCGCAGCGCCATACAGTTTCTGGTCAACAGAACCGGACTCCACAAGTGCC
CGACGGAGTTCGTGGTGGGCCTGGGTCTCAAGAAAATCGACGGACCCAAT
CTTCGTGCCCTAGCTAAGGTCCTCGAGGAGACGTTATTCGCAAGCTTTCT
AGACCAT
BO14637.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:14:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11885-RA | 426 | CG11885-PA | 1..423 | 17..439 | 2085 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:14:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11885-RA | 556 | CG11885-RA | 85..507 | 17..439 | 2085 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:14:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 420944..421366 | 439..17 | 2085 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:14:40 has no hits.
BO14637.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:18:25 Download gff for
BO14637.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11885-RA | 1..426 | 17..440 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:37:21 Download gff for
BO14637.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11885-RA | 42..464 | 17..439 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:38:49 Download gff for
BO14637.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11885-RA | 85..507 | 17..441 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:18:25 Download gff for
BO14637.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11885-RA | 42..464 | 17..439 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:03:10 Download gff for
BO14637.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11885-RA | 85..507 | 17..441 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:03:10 Download gff for
BO14637.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 420942..421366 | 17..441 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:38:49 Download gff for
BO14637.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 420942..421366 | 17..441 | 99 | | Minus |
BO14637.pep Sequence
Translation from 16 to 457
> BO14637.pep
MNHTANKPRQIGFDRQFSADVNGVPTEIVFHCFAKKWFLVITQLGKIPGI
YNVHFDVKKDERVVPYLHGPVDNPEFHVSVPITMNCCLGLDTDETRSAIQ
FLVNRTGLHKCPTEFVVGLGLKKIDGPNLRALAKVLEETLFASFLDH
BO14637.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:55:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11885-PA | 141 | CG11885-PA | 1..141 | 1..141 | 758 | 100 | Plus |
