Clone Sequence Records
BO14642.5prime Sequence
483 bp (314 high quality bases) assembled on 2006-06-02
> BO14642.5prime
GAAGTTATCAGTCGACATGTCCAGCGAGAAGCGCATAGATTTAAAGCCCG
CGTCCTTCGAAGACTTGGCCAATCAGGTGTTCGAAAAGTCGAAACAGATG
AGTATGTCAATGAAGGAGCAGTGCAAGTTGGTCCAGGAGTATCTGAAGGC
TAGGCTCGATGGGAGTGATGGAAGCGATGCATAATATAATAGTGATTCCT
ATTCTGATTTTGAATCCGAGTCGGATTCCGATTCCGATTCCGATTTCGAG
GAGGATTCCCTTACTGATTCCGATGAGCAAACAGAGGAGAGCAGTGATGA
GTCCGAATCGGAACACAGTGAAGTCGAGGAGCGTACCAAACCATCAGATA
CTCACAAGACTACCAACGGAGGGCTCTGCGAAAAACCAATCTCCAAGGTC
GAGCCTGAACAATCTCGGCTCGTGGTCTTTGTGGCTCCTCTCAAATCCCC
TGCCCCCCGCATCCACCGTCGACTGACTATGGC
BO14642.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:25:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4375-PA | 510 | CG4375-RA | 1..467 | 17..483 | 2110 | 98 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:28:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4375-RA | 793 | CG4375-RA | 113..579 | 17..483 | 2200 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:28:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1026319..1026785 | 483..17 | 2200 | 98.1 | Minus |
Blast to na_te.dros performed on 2015-02-11 10:28:32 has no hits.
BO14642.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:33:32 Download gff for
BO14642.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4375-PA | 1..467 | 17..483 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:31:37 Download gff for
BO14642.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4375-PA | 1..467 | 17..483 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:09:10 Download gff for
BO14642.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4375-RA | 110..579 | 14..483 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:23:07 Download gff for
BO14642.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4375-RA | 110..579 | 14..483 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:23:07 Download gff for
BO14642.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1026319..1026788 | 14..483 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:09:10 Download gff for
BO14642.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1026319..1026788 | 14..483 | 97 | | Minus |
BO14642.complete Sequence
541 bp assembled on 2010-07-02
GenBank Submission: KX793925
> BO14642.complete
GAAGTTATCAGTCGACATGTCCAGCAAGAAGCGCATAGATTTAAAGCCCG
CGTCCTTCGAAGACTTGGCCAATCAGGTGTTCGAAAAGTCGAAACAGATG
AGTATGTCAATGAAGGAGCAGTGCAAGTTGGTCCAGGAGTATCTGAAGGC
TAGGCTCGATGGGAGTGATGGAAGCGATGCAGAATATAATAGTGATTCCT
ATTCAGATTTTGAATCCGAGTCGGATTCCGATTCCGATTCCGATTTCGAG
GAGGATTCCCTTACTGATTCCGATGAGCAAACAGAGGAGAGCAGTGATGA
GTCCGAATCGGAACACAGTGAAGTCGAGGAGCGTACCAAACCATCAGATA
CTCACAAGACTACCAACGGAGGGCTCTGCGAAAAACCAATCTCCAAGGTC
GAGCCTGAACAATCTCGGCTCGTGGCCTTTGTGGCTCCTCTCAAATCCCC
TGCCCCCCGCATCCACCGTCGACTGACTATGGCTGGTGGCGTTATAGCTC
CTCATAGTCGCAGTAGTGCCTTCGCAAGCTTTCTAGACCAT
BO14642.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:20:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4375-RA | 510 | CG4375-PA | 1..507 | 17..523 | 2460 | 99 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:20:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4375-RA | 793 | CG4375-RA | 113..619 | 17..523 | 2460 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:20:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1026279..1026785 | 523..17 | 2460 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:20:15 has no hits.
BO14642.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 13:24:48 Download gff for
BO14642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4375-RA | 113..619 | 17..525 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:16:54 Download gff for
BO14642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4375-RA | 113..619 | 17..525 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:02 Download gff for
BO14642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4375-RA | 113..619 | 17..525 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:02 Download gff for
BO14642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1026277..1026785 | 17..525 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:16:54 Download gff for
BO14642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1026277..1026785 | 17..525 | 98 | | Minus |
BO14642.pep Sequence
Translation from 16 to 541
> BO14642.pep
MSSKKRIDLKPASFEDLANQVFEKSKQMSMSMKEQCKLVQEYLKARLDGS
DGSDAEYNSDSYSDFESESDSDSDSDFEEDSLTDSDEQTEESSDESESEH
SEVEERTKPSDTHKTTNGGLCEKPISKVEPEQSRLVAFVAPLKSPAPRIH
RRLTMAGGVIAPHSRSSAFASFLDH
BO14642.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:34:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4375-PA | 169 | CG4375-PA | 1..169 | 1..169 | 857 | 100 | Plus |
