Clone Sequence Records
BO14643.3prime Sequence
467 bp (467 high quality bases) assembled on 2006-06-16
> BO14643.3prime
ATGGTCTAGAAAGCTTGCATGTGGCCCCTCCCAAGAATGCACCTTTCCTG
GAGTCGGGAGCTTCTTCGCGCCGGAATTGCCTTCATCGCATTCATTTGTA
TCAGTAGTCTTGGGCCCGACAGGTGGAATGGGGCTACCATCTTTCGGCGC
ATCTCCAGACTTGGCCTGAGCCTTTTTGGCTGCTTCCTCCTCCTTCACCT
TGGCGGTGAGCATCTTCTTGTGCTCCTGCACCACGTCGACGAAGGGCTTC
ACCAAGCGCCGAGGATCCCTGGTGTAGTAGTAGTTGGCGAACAGACTCTG
GGTAGGACCACTAGGGATGTTTGGGGGCGGCTGAGTGCGCGGAGAGACCA
TGTCCGCGAAGCGATGGGCCGTCTTGTGGGTGCGGCCCAGCAGGAAGTTG
CGCACCCGGCTGAGAAAGCCGGCTACGTCGCGATGCTTGGGTTTCGGAGG
CATGTCGACTGATAACT
BO14643.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6914-PA | 438 | CG6914-RA | 1..435 | 453..19 | 2175 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:14:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6914-RA | 758 | CG6914-RA | 71..505 | 453..19 | 2175 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 07:14:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22606439..22606873 | 453..19 | 2175 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-03 07:14:28 has no hits.
BO14643.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:33:33 Download gff for
BO14643.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6914-PA | 1..438 | 15..453 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:31:38 Download gff for
BO14643.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6914-PA | 1..438 | 15..453 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:36:53 Download gff for
BO14643.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6914-RA | 63..515 | 9..460 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:43:02 Download gff for
BO14643.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6914-RA | 63..515 | 9..460 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:43:02 Download gff for
BO14643.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22606431..22606883 | 9..460 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:36:53 Download gff for
BO14643.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22599531..22599983 | 9..460 | 98 | | Minus |
BO14643.5prime Sequence
467 bp (467 high quality bases) assembled on 2006-06-16
> BO14643.5prime
GAAGTTATCAGTCGACATGCCTCCGAAACCCAAGCATCGCGACGTAGCCG
GCTTTCTCAGCCGGGTGCGCAACTTCCTGCTGGGCCGCACCCACAAGACG
GCCCATCGCTTCGCGGACATGGTCTCTCCGCGCACTCAGCCGCCCCCAAA
CATCCCTAGTGGTCCTACCCAGAGTCTGTTCGCCAACTACTACTACACCA
GGGATCCTCGGCGCTTGGTGAAGCCCTTCGTCGACGTGGTGCAGGAGCAC
AAGAAGATGCTCACCGCCAAGGTGAAGGAGGAGGAAGCAGCCAAAAAGGC
TCAGGCCAAGTCTGGAGATGCGCCGAAAGATGGTAGCCCCATTCCACCTG
TCGGGCCCAAGACTACTGATACAAATGAATGCGATGAAGGCAATTCCGGC
GCGAAGAAGCTCCCGACTCCAGGAAAGGTGCATTCTTGGGAGGGGCCACA
TGCAAGCTTTCTAGACC
BO14643.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6914-PA | 438 | CG6914-RA | 1..435 | 17..451 | 2175 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:07:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6914-RA | 758 | CG6914-RA | 71..505 | 17..451 | 2175 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 19:07:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22606439..22606873 | 17..451 | 2175 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 19:07:51 has no hits.
BO14643.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:33:34 Download gff for
BO14643.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6914-PA | 1..438 | 17..455 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:31:40 Download gff for
BO14643.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6914-PA | 1..438 | 17..455 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 13:57:09 Download gff for
BO14643.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6914-RA | 63..515 | 10..461 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:01:07 Download gff for
BO14643.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6914-RA | 63..515 | 10..461 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:01:07 Download gff for
BO14643.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22606431..22606883 | 10..461 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 13:57:09 Download gff for
BO14643.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22599531..22599983 | 10..461 | 98 | | Plus |
BO14643.complete Sequence
469 bp (469 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633212
> BO14643.complete
GAAGTTATCAGTCGACATGCCTCCGAAACCCAAGCATCGCGACGTAGCCG
GCTTTCTCAGCCGGGTGCGCAACTTCCTGCTGGGCCGCACCCACAAGACG
GCCCATCGCTTCGCGGACATGGTCTCTCCGCGCACTCAGCCGCCCCCAAA
CATCCCTAGTGGTCCTACCCAGAGTCTGTTCGCCAACTACTACTACACCA
GGGATCCTCGGCGCTTGGTGAAGCCCTTCGTCGACGTGGTGCAGGAGCAC
AAGAAGATGCTCACCGCCAAGGTGAAGGAGGAGGAAGCAGCCAAAAAGGC
TCAGGCCAAGTCTGGAGATGCGCCGAAAGATGGTAGCCCCATTCCACCTG
TCGGGCCCAAGACTACTGATACAAATGAATGCGATGAAGGCAATTCCGGC
GCGAAGAAGCTCCCGACTCCAGGAAAGGTGCATTCTTGGGAGGGGCCACA
TGCAAGCTTTCTAGACCAT
BO14643.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:57:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6914-RA | 438 | CG6914-PA | 1..435 | 17..451 | 2175 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:57:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6914-RA | 758 | CG6914-RA | 71..505 | 17..451 | 2175 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:57:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22606439..22606873 | 17..451 | 2175 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:57:55 has no hits.
BO14643.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:18:03 Download gff for
BO14643.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6914-RA | 1..438 | 17..455 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:02:03 Download gff for
BO14643.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6914-RA | 63..515 | 10..461 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:46:42 Download gff for
BO14643.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6914-RA | 71..505 | 17..453 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:18:03 Download gff for
BO14643.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6914-RA | 63..515 | 10..461 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:07:01 Download gff for
BO14643.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6914-RA | 71..505 | 17..453 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:07:01 Download gff for
BO14643.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22606439..22606873 | 17..453 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:46:42 Download gff for
BO14643.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22599539..22599973 | 17..453 | 99 | | Plus |
BO14643.pep Sequence
Translation from 16 to 469
> BO14643.pep
MPPKPKHRDVAGFLSRVRNFLLGRTHKTAHRFADMVSPRTQPPPNIPSGP
TQSLFANYYYTRDPRRLVKPFVDVVQEHKKMLTAKVKEEEAAKKAQAKSG
DAPKDGSPIPPVGPKTTDTNECDEGNSGAKKLPTPGKVHSWEGPHASFLD
H
BO14643.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:05:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6914-PA | 145 | CG6914-PA | 1..145 | 1..145 | 787 | 100 | Plus |
CG3621-PB | 103 | CG3621-PB | 6..103 | 8..142 | 215 | 40 | Plus |
CG3621-PA | 103 | CG3621-PA | 6..103 | 8..142 | 215 | 40 | Plus |