Clone BO14649 Report

Search the DGRC for BO14649

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:146
Well:49
Vector:pDNR-Dual
Associated Gene/TranscriptCG12229-RA
Protein status:BO14649.pep: validated full length
Sequenced Size:1747

Clone Sequence Records

BO14649.5prime Sequence

807 bp (703 high quality bases) assembled on 2006-06-02

> BO14649.5prime
GAAGTTATCAGTCGACATGCCGATCAACCAGAAAGAAGTAACGCCGCAAC
TAGACAGTCAGACAGGTGAGGATCAGGGGGAGGAGGAGGAGCAGCCGGAA
GACGAGAATCGTCTGGAGAAGTTTACGGTGCGTCTTAATGGACAACATGA
CCTGGAGCAGCGTTTAAAGGATTTCAAAGCGGCATGCGAGGCTCACGAGA
AGCACGCCAGACGGCGAAAACGGAAGAGATACTATCATTTGGGTCTTGTG
GCCAAGCTGGTGACGGAAACCACTCACGACGAGCTGCGACGTATGCTGGA
AAATGGAACCTACACCTTTCACGTGGATACGGTGGGCAACAAGCCCGATG
AACTGAAAGCCATTTTGGACACCATGAACATTGCGATATCGGCGCATTCT
GCAGAGAGGGAACTACGTCTGACAACTGGCTTGGCTCTGGAGATTAACGG
CGAGTGCTGTCGCGTTGGGAGACTGAGGAACAACTGCACCGTGATGCTGG
CACGAGGTGGGGTGGTCACACTCACCACGGATGAGTCCTACCGCTACAAA
GGCTTTAAAGAAATAGTGTACGTAATCAATCTGCGGTGTTATCTCGCCTC
CGTTCAGTTGGGCGATATTGTGATGATCGGACGTGAAGTTAGAGGTAAGG
TGGTGAAGACCCTGCGGGAAGCACTAACCGTGATGATCATAGATGCCGGT
CTGGTAGCCTCCTACGACTTTATAGAGCTTCCTAGACAGTGCCACGCTCT
CGATCCGGACCTATATCCCGATCTGTACATGAAGGACCTTGAGATGGCCG
CGTCTTT

BO14649.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG12229-PA 1716 CG12229-RA 1..791 17..807 3955 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:48:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG12229-RA 1960 CG12229-RA 185..975 17..807 3955 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:48:07
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17435457..17436247 807..17 3955 100 Minus
Blast to na_te.dros performed on 2015-02-12 11:48:10 has no hits.

BO14649.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:33:39 Download gff for BO14649.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12229-PA 1..791 17..807 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:31:48 Download gff for BO14649.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12229-PA 1..791 17..807 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:08:58 Download gff for BO14649.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12229-RA 181..975 9..807 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:46:59 Download gff for BO14649.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12229-RA 181..975 9..807 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:46:59 Download gff for BO14649.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 17435457..17436251 9..807 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:08:58 Download gff for BO14649.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17428557..17429351 9..807 99   Minus

BO14649.complete Sequence

1747 bp (1747 high quality bases) assembled on 2006-08-17

GenBank Submission: FJ633214

> BO14649.complete
GAAGTTATCAGTCGACATGCCGATCAACCAGAAAGAAGTAACGCCGCAAC
TAGACAGTCAGACAGGTGAGGATCAGGGGGAGGAGGAGGAGCAGCCGGAA
GACGAGAATCGTCTGGAGAAGTTTACGGTGCGTCTTAATGGACAACATGA
CCTGGAGCAGCGTTTAAAGGATTTCAAAGCGGCATGCGAGGCTCACGAGA
AGCACGCCAGACGGCGAAAACGGAAGAGATACTATCATTTGGGTCTTGTG
GCCAAGCTGGTGACGGAAACCACTCACGACGAGCTGCGACGTATGCTGGA
AAATGGAACCTACACCTTTCACGTGGATACGGTGGGCAACAAGCCCGATG
AACTGAAAGCCATTTTGGACACCATGAACATTGCGATATCGGCGCATTCT
GCAGAGAGGGAACTACGTCTGACAACTGGCTTGGCTCTGGAGATTAACGG
CGAGTGCTGTCGCGTTGGGAGACTGAGGAACAACTGCACCGTGATGCTGG
CACGAGGTGGGGTGGTCACACTCACCACGGATGAGTCCTACCGCTACAAA
GGCTTTAAAGAAATAGTGTACGTAATCAATCTGCGGTGTTATCTCGCCTC
CGTTCAGTTGGGCGATATTGTGATGATCGGACGTGAAGTTAGAGGTAAGG
TGGTGAAGACCCTGCGGGAAGCACTAACCGTGATGATCATAGATGCCGGT
CTGGTAGCCTCCTACGACTTTATAGAGCTTCCTAGACAGTGCCACGCTCT
CGATCCGGACCTATATCCCGATCTGTACATGAAGGACCTTGAGATGGCCG
CGTCTTTGAATGCCAACTATGTGGTTCTGCCCAAGATACGATGCAAGAGC
TTTCTTCGTGCCGTGCGGCAGACCTTGAACTCGGACTTCAACCTTAAGTT
GATCGGAATGATAGATTTCGAGTATGTGCGAAGCAACATGCTTGATTTGC
TAGGCATCATAAAGCTTGTGGACTACATTTGGATACCCGACATGTTCAAC
GTAAACTGTTGCGTATATAACTACATTATGGAGGACGTGCTTCCGATTTC
GCAGTGCCAGAAGAAGCCAGTAATTGGCACTGTTCCGCTGGAGCGTTGCA
GTGATTTTAAGCGATTTGAGTTGCACGATTTCCTGTGGAAGGTCGACGCT
ATTCACATCCAAAAAAGTCCATGGTGCAACAAATATCCGCTGATAGTCAA
AAAGCTGATGCCCATAAAAGATTATCGTGTTGGCGCGGTCCAGAATAAGA
TGGTACTGAAGAGCATCCTAACCTCATACCAGACCATTGTGAATTTTATT
ATCCGCACAATTAGCTCGATTGAGTGTCAAGCCATATTTTTGTTCACCAC
TTGCGAGACCGCCAGCGTGGCCCTTTCGCGCATTGAGATCTATTGCCCAG
TATATGTTATGGTGCCGCTGGAGGAGACAGATGATGCGGAAACCATTACC
TGCAAGGTGGAGCTCGCTCGTGCGCTTCATTTGCGCCGTAACATGCACCC
GGTTCTTTACACCAAGGATCTCAACGAGTGCAGCTACAGTCCGATTGAGT
TTGGAGTGGACTTTATGAGGAAGAAGGGCTGCTTGGAGGTTGGAGACTTT
GTAGTTACCCTGGAGGTGGGCAAAGAGGATAAGGATAACGTGGTCATCGG
CATAGGAGAGGATGTTTGCATCCTGCGGGCATTTTACGTGTCGCCACTCT
TTGCCTGCGAGAAGTTTAAGTACGGTGGAGCAAGCTTTCTAGACCAT

BO14649.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:17:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG12229-RA 1716 CG12229-PA 1..1713 17..1729 8475 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:17:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG12229-RA 1960 CG12229-RA 185..1897 17..1729 8475 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:17:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17434535..17436247 1729..17 8475 99.6 Minus
Blast to na_te.dros performed on 2014-11-27 07:17:04 has no hits.

BO14649.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:55:01 Download gff for BO14649.complete
Subject Subject Range Query Range Percent Splice Strand
CG12229-RA 1..1716 17..1733 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:11:33 Download gff for BO14649.complete
Subject Subject Range Query Range Percent Splice Strand
CG12229-RA 181..1904 9..1738 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:10:55 Download gff for BO14649.complete
Subject Subject Range Query Range Percent Splice Strand
CG12229-RA 185..1897 17..1731 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:55:01 Download gff for BO14649.complete
Subject Subject Range Query Range Percent Splice Strand
CG12229-RA 181..1904 9..1738 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:07:26 Download gff for BO14649.complete
Subject Subject Range Query Range Percent Splice Strand
CG12229-RA 185..1897 17..1731 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:07:26 Download gff for BO14649.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17434533..17436247 17..1731 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:10:55 Download gff for BO14649.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17427633..17429347 17..1731 99   Minus

BO14649.pep Sequence

Translation from 16 to 1747

> BO14649.pep
MPINQKEVTPQLDSQTGEDQGEEEEQPEDENRLEKFTVRLNGQHDLEQRL
KDFKAACEAHEKHARRRKRKRYYHLGLVAKLVTETTHDELRRMLENGTYT
FHVDTVGNKPDELKAILDTMNIAISAHSAERELRLTTGLALEINGECCRV
GRLRNNCTVMLARGGVVTLTTDESYRYKGFKEIVYVINLRCYLASVQLGD
IVMIGREVRGKVVKTLREALTVMIIDAGLVASYDFIELPRQCHALDPDLY
PDLYMKDLEMAASLNANYVVLPKIRCKSFLRAVRQTLNSDFNLKLIGMID
FEYVRSNMLDLLGIIKLVDYIWIPDMFNVNCCVYNYIMEDVLPISQCQKK
PVIGTVPLERCSDFKRFELHDFLWKVDAIHIQKSPWCNKYPLIVKKLMPI
KDYRVGAVQNKMVLKSILTSYQTIVNFIIRTISSIECQAIFLFTTCETAS
VALSRIEIYCPVYVMVPLEETDDAETITCKVELARALHLRRNMHPVLYTK
DLNECSYSPIEFGVDFMRKKGCLEVGDFVVTLEVGKEDKDNVVIGIGEDV
CILRAFYVSPLFACEKFKYGGASFLDH

BO14649.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:56:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG12229-PA 571 CG12229-PA 1..571 1..571 2983 100 Plus