Clone Sequence Records
BO14649.5prime Sequence
807 bp (703 high quality bases) assembled on 2006-06-02
> BO14649.5prime
GAAGTTATCAGTCGACATGCCGATCAACCAGAAAGAAGTAACGCCGCAAC
TAGACAGTCAGACAGGTGAGGATCAGGGGGAGGAGGAGGAGCAGCCGGAA
GACGAGAATCGTCTGGAGAAGTTTACGGTGCGTCTTAATGGACAACATGA
CCTGGAGCAGCGTTTAAAGGATTTCAAAGCGGCATGCGAGGCTCACGAGA
AGCACGCCAGACGGCGAAAACGGAAGAGATACTATCATTTGGGTCTTGTG
GCCAAGCTGGTGACGGAAACCACTCACGACGAGCTGCGACGTATGCTGGA
AAATGGAACCTACACCTTTCACGTGGATACGGTGGGCAACAAGCCCGATG
AACTGAAAGCCATTTTGGACACCATGAACATTGCGATATCGGCGCATTCT
GCAGAGAGGGAACTACGTCTGACAACTGGCTTGGCTCTGGAGATTAACGG
CGAGTGCTGTCGCGTTGGGAGACTGAGGAACAACTGCACCGTGATGCTGG
CACGAGGTGGGGTGGTCACACTCACCACGGATGAGTCCTACCGCTACAAA
GGCTTTAAAGAAATAGTGTACGTAATCAATCTGCGGTGTTATCTCGCCTC
CGTTCAGTTGGGCGATATTGTGATGATCGGACGTGAAGTTAGAGGTAAGG
TGGTGAAGACCCTGCGGGAAGCACTAACCGTGATGATCATAGATGCCGGT
CTGGTAGCCTCCTACGACTTTATAGAGCTTCCTAGACAGTGCCACGCTCT
CGATCCGGACCTATATCCCGATCTGTACATGAAGGACCTTGAGATGGCCG
CGTCTTT
BO14649.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12229-PA | 1716 | CG12229-RA | 1..791 | 17..807 | 3955 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:48:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12229-RA | 1960 | CG12229-RA | 185..975 | 17..807 | 3955 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:48:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 17435457..17436247 | 807..17 | 3955 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 11:48:10 has no hits.
BO14649.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:33:39 Download gff for
BO14649.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12229-PA | 1..791 | 17..807 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:31:48 Download gff for
BO14649.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12229-PA | 1..791 | 17..807 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:08:58 Download gff for
BO14649.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12229-RA | 181..975 | 9..807 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:46:59 Download gff for
BO14649.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12229-RA | 181..975 | 9..807 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:46:59 Download gff for
BO14649.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 17435457..17436251 | 9..807 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:08:58 Download gff for
BO14649.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 17428557..17429351 | 9..807 | 99 | | Minus |
BO14649.complete Sequence
1747 bp (1747 high quality bases) assembled on 2006-08-17
GenBank Submission: FJ633214
> BO14649.complete
GAAGTTATCAGTCGACATGCCGATCAACCAGAAAGAAGTAACGCCGCAAC
TAGACAGTCAGACAGGTGAGGATCAGGGGGAGGAGGAGGAGCAGCCGGAA
GACGAGAATCGTCTGGAGAAGTTTACGGTGCGTCTTAATGGACAACATGA
CCTGGAGCAGCGTTTAAAGGATTTCAAAGCGGCATGCGAGGCTCACGAGA
AGCACGCCAGACGGCGAAAACGGAAGAGATACTATCATTTGGGTCTTGTG
GCCAAGCTGGTGACGGAAACCACTCACGACGAGCTGCGACGTATGCTGGA
AAATGGAACCTACACCTTTCACGTGGATACGGTGGGCAACAAGCCCGATG
AACTGAAAGCCATTTTGGACACCATGAACATTGCGATATCGGCGCATTCT
GCAGAGAGGGAACTACGTCTGACAACTGGCTTGGCTCTGGAGATTAACGG
CGAGTGCTGTCGCGTTGGGAGACTGAGGAACAACTGCACCGTGATGCTGG
CACGAGGTGGGGTGGTCACACTCACCACGGATGAGTCCTACCGCTACAAA
GGCTTTAAAGAAATAGTGTACGTAATCAATCTGCGGTGTTATCTCGCCTC
CGTTCAGTTGGGCGATATTGTGATGATCGGACGTGAAGTTAGAGGTAAGG
TGGTGAAGACCCTGCGGGAAGCACTAACCGTGATGATCATAGATGCCGGT
CTGGTAGCCTCCTACGACTTTATAGAGCTTCCTAGACAGTGCCACGCTCT
CGATCCGGACCTATATCCCGATCTGTACATGAAGGACCTTGAGATGGCCG
CGTCTTTGAATGCCAACTATGTGGTTCTGCCCAAGATACGATGCAAGAGC
TTTCTTCGTGCCGTGCGGCAGACCTTGAACTCGGACTTCAACCTTAAGTT
GATCGGAATGATAGATTTCGAGTATGTGCGAAGCAACATGCTTGATTTGC
TAGGCATCATAAAGCTTGTGGACTACATTTGGATACCCGACATGTTCAAC
GTAAACTGTTGCGTATATAACTACATTATGGAGGACGTGCTTCCGATTTC
GCAGTGCCAGAAGAAGCCAGTAATTGGCACTGTTCCGCTGGAGCGTTGCA
GTGATTTTAAGCGATTTGAGTTGCACGATTTCCTGTGGAAGGTCGACGCT
ATTCACATCCAAAAAAGTCCATGGTGCAACAAATATCCGCTGATAGTCAA
AAAGCTGATGCCCATAAAAGATTATCGTGTTGGCGCGGTCCAGAATAAGA
TGGTACTGAAGAGCATCCTAACCTCATACCAGACCATTGTGAATTTTATT
ATCCGCACAATTAGCTCGATTGAGTGTCAAGCCATATTTTTGTTCACCAC
TTGCGAGACCGCCAGCGTGGCCCTTTCGCGCATTGAGATCTATTGCCCAG
TATATGTTATGGTGCCGCTGGAGGAGACAGATGATGCGGAAACCATTACC
TGCAAGGTGGAGCTCGCTCGTGCGCTTCATTTGCGCCGTAACATGCACCC
GGTTCTTTACACCAAGGATCTCAACGAGTGCAGCTACAGTCCGATTGAGT
TTGGAGTGGACTTTATGAGGAAGAAGGGCTGCTTGGAGGTTGGAGACTTT
GTAGTTACCCTGGAGGTGGGCAAAGAGGATAAGGATAACGTGGTCATCGG
CATAGGAGAGGATGTTTGCATCCTGCGGGCATTTTACGTGTCGCCACTCT
TTGCCTGCGAGAAGTTTAAGTACGGTGGAGCAAGCTTTCTAGACCAT
BO14649.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:17:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12229-RA | 1716 | CG12229-PA | 1..1713 | 17..1729 | 8475 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:17:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12229-RA | 1960 | CG12229-RA | 185..1897 | 17..1729 | 8475 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:17:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 17434535..17436247 | 1729..17 | 8475 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:17:04 has no hits.
BO14649.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:55:01 Download gff for
BO14649.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12229-RA | 1..1716 | 17..1733 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:11:33 Download gff for
BO14649.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12229-RA | 181..1904 | 9..1738 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:10:55 Download gff for
BO14649.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12229-RA | 185..1897 | 17..1731 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:55:01 Download gff for
BO14649.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12229-RA | 181..1904 | 9..1738 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:07:26 Download gff for
BO14649.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12229-RA | 185..1897 | 17..1731 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:07:26 Download gff for
BO14649.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 17434533..17436247 | 17..1731 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:10:55 Download gff for
BO14649.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 17427633..17429347 | 17..1731 | 99 | | Minus |
BO14649.pep Sequence
Translation from 16 to 1747
> BO14649.pep
MPINQKEVTPQLDSQTGEDQGEEEEQPEDENRLEKFTVRLNGQHDLEQRL
KDFKAACEAHEKHARRRKRKRYYHLGLVAKLVTETTHDELRRMLENGTYT
FHVDTVGNKPDELKAILDTMNIAISAHSAERELRLTTGLALEINGECCRV
GRLRNNCTVMLARGGVVTLTTDESYRYKGFKEIVYVINLRCYLASVQLGD
IVMIGREVRGKVVKTLREALTVMIIDAGLVASYDFIELPRQCHALDPDLY
PDLYMKDLEMAASLNANYVVLPKIRCKSFLRAVRQTLNSDFNLKLIGMID
FEYVRSNMLDLLGIIKLVDYIWIPDMFNVNCCVYNYIMEDVLPISQCQKK
PVIGTVPLERCSDFKRFELHDFLWKVDAIHIQKSPWCNKYPLIVKKLMPI
KDYRVGAVQNKMVLKSILTSYQTIVNFIIRTISSIECQAIFLFTTCETAS
VALSRIEIYCPVYVMVPLEETDDAETITCKVELARALHLRRNMHPVLYTK
DLNECSYSPIEFGVDFMRKKGCLEVGDFVVTLEVGKEDKDNVVIGIGEDV
CILRAFYVSPLFACEKFKYGGASFLDH
BO14649.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:56:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12229-PA | 571 | CG12229-PA | 1..571 | 1..571 | 2983 | 100 | Plus |