Clone BO14655 Report

Search the DGRC for BO14655

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:146
Well:55
Vector:pDNR-Dual
Associated Gene/TranscriptCG6907-RA
Protein status:BO14655.pep: validated full length
Sequenced Size:1345

Clone Sequence Records

BO14655.5prime Sequence

766 bp (640 high quality bases) assembled on 2006-06-02

> BO14655.5prime
GAAGTTATCAGTCGACATGACCAGTTTCCGCAAGCGCACCGTGCAGAAGC
CAATCCGCGGCACCCGCACCTCGCCGCACACGGCGCAGGTGATCACCTCC
AGCGGAAATCCGTACTTGGACGTGGTCATTGGCGGCGGTCTGCCCATGGG
TTCGATCTGCCTGATCGAGGAGGATCGCTTCATGACGCACGCCAAGGTGC
TGGCCAAGTACTTTCTGGCCGAGGGTGTGATTTCCAAGCAGGAGATATTT
CTGGGCAGCCTGGACGACATTCCAGCCGAGATGCTGCGCCGTCTGCCCAG
ACCGCTGACCGACCAGGAATCGATGGAGCAAAGCGAGGTGCAAGCGCTGG
GAGATGCTGGCGCCGAAAATGGCCTAAGGATCGCCTGGCGATACAATGAT
CTGCCGCTGGTGAATTCGGAACATGCCACAGCAAAAATCGGACACCATTT
CAATCTGATGGAACAGATGGACTCCATGATGCTCTACAATGTCAAGACTA
CCTTGTGGGACGATAGCCCCAAGCATCTGGACATCGTCATTGACGAGGAG
TTCTCCAAGAGCAGCTCCCCAACCACTCCGTCGCTGGAGCAGCAGCCCGT
GGAGGATGCCCCACCGATTCCGGGCACGGAGACCGCTCCGCAGGAAGAAG
ATGCCAGCCCAGGAGGAGGAGAACTCTGCCAACAACAATAATAACAACAA
TAACAATAGCAACAGCGTGACCAGTAACACAAAAAACAGGCAGCCAGGAT
TCGCCGTTGCAGGTGT

BO14655.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG6907-PA 1314 CG6907-RA 1..629 17..645 3120 99.8 Plus
CG6907-PA 1314 CG6907-RA 629..718 646..735 400 97.7 Plus
CG4952-PG 3192 dac-RG 2556..2592 680..716 185 100 Plus
CG4952-PC 3198 dac-RC 2562..2598 680..716 185 100 Plus
CG4952-PA 3219 dac-RA 2583..2619 680..716 185 100 Plus
CG4952-PF 3219 dac-RF 2583..2619 680..716 185 100 Plus
CG4952-PD 3225 dac-RD 2589..2625 680..716 185 100 Plus
CG4952-PE 3246 dac-RE 2610..2646 680..716 185 100 Plus
CG4952-PB 3246 dac-RB 2610..2646 680..716 185 100 Plus
CG6907-PA 1314 CG6907-RA 714..748 732..766 175 100 Plus
CG3754-PA 1935 CG3754-RA 1230..1263 683..716 145 97 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:08:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG6907-RB 1512 CG6907-RB 113..860 17..766 3655 99.3 Plus
CG6907-RA 1671 CG6907-RA 272..1019 17..766 3655 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:08:30
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5524410..5525157 17..766 3605 99.3 Plus
Blast to na_te.dros performed on 2015-02-12 00:08:34 has no hits.

BO14655.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:33:45 Download gff for BO14655.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6907-PA 1..748 17..766 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:31:56 Download gff for BO14655.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6907-PA 1..748 17..766 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:57:17 Download gff for BO14655.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6907-RA 272..1019 17..766 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:56:14 Download gff for BO14655.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6907-RA 272..1019 17..766 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:56:14 Download gff for BO14655.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 5524410..5525157 17..766 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:57:17 Download gff for BO14655.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5524410..5525157 17..766 99   Plus

BO14655.complete Sequence

1345 bp (1345 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633217

> BO14655.complete
GAAGTTATCAGTCGACATGACCAGTTTCCGCAAGCGCACCGTGCAGAAGC
CAATCCGCGGCACCCGCACCTCGCCGCACACGGCGCAGGTGATCACCTCC
AGCGGAAATCCGTACTTGGACGTGGTCATTGGCGGCGGTCTGCCCATGGG
TTCGATCTGCCTGATCGAGGAGGATCGCTTCATGACGCACGCCAAGGTGC
TGGCCAAGTACTTTCTGGCCGAGGGTGTGATTTCCAAGCAGGAGATATTT
CTGGGCAGCCTGGACGACATTCCAGCCGAGATGCTGCGCCGTCTGCCCAG
ACCGCTGACCGACCAGGAATCGATGGAGCAAAGCGAGGTGCAAGCGCTGG
GAGATGCTGGCGCCGAAAATGGCCTAAGGATCGCCTGGCGATACAATGAT
CTGCCGCTGGTGAATTCGGAACATGCCACAGCAAAAATCGGACACCATTT
CAATCTGATGGAACAGATGGACTCCATGATGCTCTACAATGTCAAGACTA
CCTTGTGGGACGATAGCCCCAAGCATCTGGACATCGTCATTGACGAGGAG
TTCTCCAAGAGCAGCTCCCCAACCACTCCGTCGCTGGAGCAGCAGCCCGT
GGAGGATGCCCCACCGATTCCGGGCACGGAGACCGCTCCGCAGGAGAAGA
TGCCAGCCCAGGAGGAGGAGAACTCTGCCAACAACAATAATAACAACAAT
AACAATAGCAGCAGCGTGACCAGTAGCACAAAAACAGGCAGCCAGGATTC
GCCGTTGCAGGTGTTCCACAACCCTCGGTACAAAGGACTGCTCAACGATA
TTCAACAGCTGCTGCGTAACGAGAGCTTCGTCGCTGGGACCAAGAATAAC
CTGTGCCGCGTCTGCCTGACCTCGTTGGGATCGCCGCTGTGGTACGACGA
ACACTTCGGCGAGGATCTGATCAAGTTTCTCACACTGCTGATGGCCAGTG
TGCGGAACTGCAACTCCGTGTGCCTGATCACGATGCCCATGCACCTGATT
GCCAAGTACGATGCCAGCCTAGTGCCCAAGATCCGCCAACTGGTGGACTA
TGCCATCGAACTGGAGTCGTTTGCCGGTTCGGAGCGTGAAACGCACCCAG
CCTTCAAGGAGTACAGTGGCCTGCTCCATTTGCACAAGATGTCGGCCATC
AATACGCTGGCCGTGCACATGCCGGAAACCCCGGACTTGGCCTTCAAGTT
GCGCCGCAAGAAGTTCATCATCGAAAAGTTCCATCTGCCCCCGGAGCTGC
AGGAGTCATCTGCCAAGCCGGACAATTGCATCTCTGGTCTACTGAGCAAT
TCCAATGCCACAGCCTCGCTGGATTTCGCAAGCTTTCTAGACCAT

BO14655.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:03:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG6907-RB 1314 CG6907-PB 1..1311 17..1327 6540 99.9 Plus
CG6907-RA 1314 CG6907-PA 1..1311 17..1327 6540 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:03:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG6907-RB 1512 CG6907-RB 113..1423 17..1327 6540 99.9 Plus
CG6907-RA 1671 CG6907-RA 272..1582 17..1327 6540 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:03:26
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5524410..5525720 17..1327 6540 99.9 Plus
Blast to na_te.dros performed 2014-11-27 13:03:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 5648..5713 678..742 129 68.2 Plus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 19..46 680..707 113 89.3 Plus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 22..49 680..707 113 89.3 Plus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 7057..7084 680..707 113 89.3 Plus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 7060..7087 680..707 113 89.3 Plus

BO14655.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:18:06 Download gff for BO14655.complete
Subject Subject Range Query Range Percent Splice Strand
CG6907-RA 1..1314 17..1328 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:37:01 Download gff for BO14655.complete
Subject Subject Range Query Range Percent Splice Strand
CG6907-RA 272..1592 17..1340 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:47:42 Download gff for BO14655.complete
Subject Subject Range Query Range Percent Splice Strand
CG6907-RA 272..1582 17..1329 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:18:07 Download gff for BO14655.complete
Subject Subject Range Query Range Percent Splice Strand
CG6907-RA 272..1592 17..1340 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:10:04 Download gff for BO14655.complete
Subject Subject Range Query Range Percent Splice Strand
CG6907-RA 272..1582 17..1329 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:10:04 Download gff for BO14655.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5524410..5525720 17..1329 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:47:42 Download gff for BO14655.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5524410..5525720 17..1329 99   Plus

BO14655.pep Sequence

Translation from 16 to 1345

> BO14655.pep
MTSFRKRTVQKPIRGTRTSPHTAQVITSSGNPYLDVVIGGGLPMGSICLI
EEDRFMTHAKVLAKYFLAEGVISKQEIFLGSLDDIPAEMLRRLPRPLTDQ
ESMEQSEVQALGDAGAENGLRIAWRYNDLPLVNSEHATAKIGHHFNLMEQ
MDSMMLYNVKTTLWDDSPKHLDIVIDEEFSKSSSPTTPSLEQQPVEDAPP
IPGTETAPQEKMPAQEEENSANNNNNNNNNSSSVTSSTKTGSQDSPLQVF
HNPRYKGLLNDIQQLLRNESFVAGTKNNLCRVCLTSLGSPLWYDEHFGED
LIKFLTLLMASVRNCNSVCLITMPMHLIAKYDASLVPKIRQLVDYAIELE
SFAGSERETHPAFKEYSGLLHLHKMSAINTLAVHMPETPDLAFKLRRKKF
IIEKFHLPPELQESSAKPDNCISGLLSNSNATASLDFASFLDH

BO14655.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:05:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG6907-PB 437 CG6907-PB 1..437 1..437 2269 100 Plus
CG6907-PA 437 CG6907-PA 1..437 1..437 2269 100 Plus