Clone Sequence Records
BO14665.5prime Sequence
735 bp (687 high quality bases) assembled on 2006-06-02
> BO14665.5prime
GAAGTTATCAGTCGACATGGAAACAACCGCTCAGCTGCAGCAATTGAAAC
CCCAACAGAGCGTCATGTCGCACGTCACGGTCACCGAGAGTGATGCCGAG
TTTGCGATCTTGAATCTGGATTGCAACGAAGGTTTGGAGAGCTCGGTGAC
CAAGATTCTGGTGGCCATCGAAGAGATGTTCTGCAGTTACTTTGAGGATC
TCAAGAAGGAGCTGGAACTGCAGAAGATGGCGGCACTGACCTTGAATCAG
CTGACCCAACGTTACAGGATCAACACGAAGGTGGACACGAGCTGCACGTG
TCCGCAGATCTATGAGATCGAATCGGATGATGCGATCATTAACAAATACT
ACATCTACTACCAGGTGATAGCCTGTTCCAACAATAACCAGGGTTGGGTC
ATCCACAACATGCGCCCCTATGTTCTCCTCTTTCGTCGAGAGTGCGCCAA
GTTGAATCTGAACGAGGATAGTCCCTTCATCATGGGTGACGCTTTCCCCA
AGCCAATCAAGTTCTTCATCGACTTGGTGGAGGAGCTCTTCGCCTACTTC
TACAGTGGACACGTACAGTTCGACTGCGCTGCCCACATGTTGGATCCCTT
GGACTTGAACAGCATCGAGTACTATCAGAAGCTATTTGGAACCCAATGAA
GATTTCGCAAATTACTTCAAGTACAACATGAGCTTCTGCAAGTGCCTGCG
TATGCCGCGCCGTTGTCCTGCCCACGAGTATCCGC
BO14665.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30393-PA | 1065 | CG30393-RA | 1..620 | 17..636 | 3075 | 99.8 | Plus |
CG30393-PA | 1065 | CG30393-RA | 619..718 | 636..735 | 475 | 99 | Plus |
CG30391-PA | 1017 | CG30391-RA | 266..389 | 282..405 | 270 | 88.7 | Plus |
CG30391-PA | 1017 | CG30391-RA | 494..546 | 510..562 | 190 | 94.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:58:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30393-RA | 1216 | CG30393-RA | 64..782 | 16..735 | 3545 | 99.6 | Plus |
CG30391-RA | 1538 | CG30391-RA | 227..780 | 146..700 | 995 | 79.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:58:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21266798..21267516 | 735..16 | 3520 | 99.6 | Minus |
2R | 25286936 | 2R | 21265563..21266116 | 700..146 | 955 | 78.6 | Minus |
Blast to na_te.dros performed on 2015-02-11 23:58:45 has no hits.
BO14665.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:33:52 Download gff for
BO14665.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30393-PA | 1..718 | 17..735 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:32:06 Download gff for
BO14665.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30393-PA | 1..718 | 17..735 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:56:30 Download gff for
BO14665.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30393-RA | 57..782 | 10..735 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:54:59 Download gff for
BO14665.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30393-RA | 57..782 | 10..735 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:54:59 Download gff for
BO14665.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21266798..21267523 | 10..735 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:56:30 Download gff for
BO14665.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17154303..17155028 | 10..735 | 99 | | Minus |
BO14665.complete Sequence
1096 bp (1096 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633219
> BO14665.complete
GAAGTTATCAGTCGACATGGAAACAACCGCTCAGCTGCAGCAATTGAAAC
CCCAACAGAGCGTCATGTCGCACGTCACGGTCACCGAGAGTGATGCCGAG
TTTGCGATCTTGAATCTGGATTGCAACGAAGGTTTGGAGAGCTCGGTGAC
CAAGATTCTGGTGGCCATCGAAGAGATGTTCTGCAGTTACTTTGAGGATC
TCAAGAAGGAGCTGGAACTGCAGAAGATGGCGGCACTGACCTTGAATCAG
CTGACCCAACGTTACAGGATCAACACGAAGGTGGACACGAGCTGCACGTG
TCCGCAGATCTATGAGATCGAATCGGATGATGCGATCATTAACAAATACT
ACATCTACTACCAGGTGATAGCCTGTTCCAACAATAACCAGGGTTGGGTC
ATCCACAACATGCGCCCCTATGTTCTCCTCTTTCGTCGAGAGTGCGCCAA
GTTGAATCTGAACGAGGATAGTCCCTTCATCATGGGTGACGCTTTCCACA
AGCCAATCAAGTTCTTCATCGACTTGGTGGAGGAGCTCTTCGCCTACTTC
TACAGTGGACACGTACAGTTCGACTGCGCTGCCCACATGTTGGATCCCTT
GGACTTGAACAGCATCGAGTACTATCAGAAGCTATTGGAACCCAATGAGG
ATTTCGCAAATTACTTCAAGTACAACATGAGCTTCTGCAAGTGCCTGCGT
ATGCCGCGCCGTTGTCCTGCCCACGAGTATCCGCAGGTGAAAGAGGACTT
TAACGCCACCTTTGTCAATCAGGCCAAGAAGAAGCGGTGTGCCAGGCGAT
GCGAAAAGATGGCCGAGGCCGAGAGCAATTTACTGGATCGAAAGAAGTCC
ATAGTTAGACTCCAACGTCCCAGTGAGATGTCTGGCATAAGCACCGGTCA
GGAATTAGACCAGGACAACGAAAGGGAACTGAAGAGGATCTCTAGACACC
AACGTCGCAGTGAGAGGTCTATAATAAGTATTACTAAGGAAGATTACCAT
ACTCCTCTGCCCGACAACCGACACGAGCTAACTGTAAAGGATTCAGTAAT
CAGATGGTCGGTGAACCCACAAATTCTCGCAAGCTTTCTAGACCAT
BO14665.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:11:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30393-RA | 1065 | CG30393-PA | 1..1062 | 17..1078 | 5310 | 100 | Plus |
CG30391-RA | 1017 | CG30391-PA | 130..683 | 146..699 | 1030 | 79.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:11:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30393-RA | 1216 | CG30393-RA | 64..1126 | 16..1078 | 5315 | 100 | Plus |
CG30391-RA | 1538 | CG30391-RA | 227..780 | 146..699 | 1030 | 79.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:11:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21266454..21267516 | 1078..16 | 5315 | 100 | Minus |
2R | 25286936 | 2R | 21265563..21266116 | 699..146 | 1030 | 79.1 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:11:15 has no hits.
BO14665.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:18:09 Download gff for
BO14665.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30393-RA | 1..1065 | 17..1081 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:37:05 Download gff for
BO14665.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30393-RA | 57..1132 | 10..1083 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:35:59 Download gff for
BO14665.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30393-RA | 65..1126 | 17..1080 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:18:09 Download gff for
BO14665.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30393-RA | 57..1132 | 10..1083 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:05:22 Download gff for
BO14665.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30393-RA | 65..1126 | 17..1080 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:05:22 Download gff for
BO14665.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21266451..21267515 | 17..1080 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:35:59 Download gff for
BO14665.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17153956..17155020 | 17..1080 | 99 | | Minus |
BO14665.pep Sequence
Translation from 16 to 1096
> BO14665.pep
METTAQLQQLKPQQSVMSHVTVTESDAEFAILNLDCNEGLESSVTKILVA
IEEMFCSYFEDLKKELELQKMAALTLNQLTQRYRINTKVDTSCTCPQIYE
IESDDAIINKYYIYYQVIACSNNNQGWVIHNMRPYVLLFRRECAKLNLNE
DSPFIMGDAFHKPIKFFIDLVEELFAYFYSGHVQFDCAAHMLDPLDLNSI
EYYQKLLEPNEDFANYFKYNMSFCKCLRMPRRCPAHEYPQVKEDFNATFV
NQAKKKRCARRCEKMAEAESNLLDRKKSIVRLQRPSEMSGISTGQELDQD
NERELKRISRHQRRSERSIISITKEDYHTPLPDNRHELTVKDSVIRWSVN
PQILASFLDH
BO14665.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:05:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30393-PA | 354 | CG30393-PA | 1..354 | 1..354 | 1864 | 100 | Plus |
CG30391-PA | 338 | CG30391-PA | 1..333 | 1..328 | 927 | 55.2 | Plus |
CG31910-PA | 262 | CG31910-PA | 44..242 | 39..234 | 300 | 31.7 | Plus |