Clone BO14665 Report

Search the DGRC for BO14665

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:146
Well:65
Vector:pDNR-Dual
Associated Gene/TranscriptCG30393-RA
Protein status:BO14665.pep: validated full length
Sequenced Size:1096

Clone Sequence Records

BO14665.5prime Sequence

735 bp (687 high quality bases) assembled on 2006-06-02

> BO14665.5prime
GAAGTTATCAGTCGACATGGAAACAACCGCTCAGCTGCAGCAATTGAAAC
CCCAACAGAGCGTCATGTCGCACGTCACGGTCACCGAGAGTGATGCCGAG
TTTGCGATCTTGAATCTGGATTGCAACGAAGGTTTGGAGAGCTCGGTGAC
CAAGATTCTGGTGGCCATCGAAGAGATGTTCTGCAGTTACTTTGAGGATC
TCAAGAAGGAGCTGGAACTGCAGAAGATGGCGGCACTGACCTTGAATCAG
CTGACCCAACGTTACAGGATCAACACGAAGGTGGACACGAGCTGCACGTG
TCCGCAGATCTATGAGATCGAATCGGATGATGCGATCATTAACAAATACT
ACATCTACTACCAGGTGATAGCCTGTTCCAACAATAACCAGGGTTGGGTC
ATCCACAACATGCGCCCCTATGTTCTCCTCTTTCGTCGAGAGTGCGCCAA
GTTGAATCTGAACGAGGATAGTCCCTTCATCATGGGTGACGCTTTCCCCA
AGCCAATCAAGTTCTTCATCGACTTGGTGGAGGAGCTCTTCGCCTACTTC
TACAGTGGACACGTACAGTTCGACTGCGCTGCCCACATGTTGGATCCCTT
GGACTTGAACAGCATCGAGTACTATCAGAAGCTATTTGGAACCCAATGAA
GATTTCGCAAATTACTTCAAGTACAACATGAGCTTCTGCAAGTGCCTGCG
TATGCCGCGCCGTTGTCCTGCCCACGAGTATCCGC

BO14665.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG30393-PA 1065 CG30393-RA 1..620 17..636 3075 99.8 Plus
CG30393-PA 1065 CG30393-RA 619..718 636..735 475 99 Plus
CG30391-PA 1017 CG30391-RA 266..389 282..405 270 88.7 Plus
CG30391-PA 1017 CG30391-RA 494..546 510..562 190 94.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:58:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG30393-RA 1216 CG30393-RA 64..782 16..735 3545 99.6 Plus
CG30391-RA 1538 CG30391-RA 227..780 146..700 995 79.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:58:40
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21266798..21267516 735..16 3520 99.6 Minus
2R 25286936 2R 21265563..21266116 700..146 955 78.6 Minus
Blast to na_te.dros performed on 2015-02-11 23:58:45 has no hits.

BO14665.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:33:52 Download gff for BO14665.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30393-PA 1..718 17..735 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:32:06 Download gff for BO14665.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30393-PA 1..718 17..735 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:56:30 Download gff for BO14665.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 57..782 10..735 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:54:59 Download gff for BO14665.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 57..782 10..735 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:54:59 Download gff for BO14665.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 21266798..21267523 10..735 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:56:30 Download gff for BO14665.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17154303..17155028 10..735 99   Minus

BO14665.complete Sequence

1096 bp (1096 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633219

> BO14665.complete
GAAGTTATCAGTCGACATGGAAACAACCGCTCAGCTGCAGCAATTGAAAC
CCCAACAGAGCGTCATGTCGCACGTCACGGTCACCGAGAGTGATGCCGAG
TTTGCGATCTTGAATCTGGATTGCAACGAAGGTTTGGAGAGCTCGGTGAC
CAAGATTCTGGTGGCCATCGAAGAGATGTTCTGCAGTTACTTTGAGGATC
TCAAGAAGGAGCTGGAACTGCAGAAGATGGCGGCACTGACCTTGAATCAG
CTGACCCAACGTTACAGGATCAACACGAAGGTGGACACGAGCTGCACGTG
TCCGCAGATCTATGAGATCGAATCGGATGATGCGATCATTAACAAATACT
ACATCTACTACCAGGTGATAGCCTGTTCCAACAATAACCAGGGTTGGGTC
ATCCACAACATGCGCCCCTATGTTCTCCTCTTTCGTCGAGAGTGCGCCAA
GTTGAATCTGAACGAGGATAGTCCCTTCATCATGGGTGACGCTTTCCACA
AGCCAATCAAGTTCTTCATCGACTTGGTGGAGGAGCTCTTCGCCTACTTC
TACAGTGGACACGTACAGTTCGACTGCGCTGCCCACATGTTGGATCCCTT
GGACTTGAACAGCATCGAGTACTATCAGAAGCTATTGGAACCCAATGAGG
ATTTCGCAAATTACTTCAAGTACAACATGAGCTTCTGCAAGTGCCTGCGT
ATGCCGCGCCGTTGTCCTGCCCACGAGTATCCGCAGGTGAAAGAGGACTT
TAACGCCACCTTTGTCAATCAGGCCAAGAAGAAGCGGTGTGCCAGGCGAT
GCGAAAAGATGGCCGAGGCCGAGAGCAATTTACTGGATCGAAAGAAGTCC
ATAGTTAGACTCCAACGTCCCAGTGAGATGTCTGGCATAAGCACCGGTCA
GGAATTAGACCAGGACAACGAAAGGGAACTGAAGAGGATCTCTAGACACC
AACGTCGCAGTGAGAGGTCTATAATAAGTATTACTAAGGAAGATTACCAT
ACTCCTCTGCCCGACAACCGACACGAGCTAACTGTAAAGGATTCAGTAAT
CAGATGGTCGGTGAACCCACAAATTCTCGCAAGCTTTCTAGACCAT

BO14665.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:11:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG30393-RA 1065 CG30393-PA 1..1062 17..1078 5310 100 Plus
CG30391-RA 1017 CG30391-PA 130..683 146..699 1030 79.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:11:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG30393-RA 1216 CG30393-RA 64..1126 16..1078 5315 100 Plus
CG30391-RA 1538 CG30391-RA 227..780 146..699 1030 79.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:11:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21266454..21267516 1078..16 5315 100 Minus
2R 25286936 2R 21265563..21266116 699..146 1030 79.1 Minus
Blast to na_te.dros performed on 2014-11-27 14:11:15 has no hits.

BO14665.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:18:09 Download gff for BO14665.complete
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 1..1065 17..1081 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:37:05 Download gff for BO14665.complete
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 57..1132 10..1083 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:35:59 Download gff for BO14665.complete
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 65..1126 17..1080 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:18:09 Download gff for BO14665.complete
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 57..1132 10..1083 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:05:22 Download gff for BO14665.complete
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 65..1126 17..1080 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:05:22 Download gff for BO14665.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21266451..21267515 17..1080 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:35:59 Download gff for BO14665.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17153956..17155020 17..1080 99   Minus

BO14665.pep Sequence

Translation from 16 to 1096

> BO14665.pep
METTAQLQQLKPQQSVMSHVTVTESDAEFAILNLDCNEGLESSVTKILVA
IEEMFCSYFEDLKKELELQKMAALTLNQLTQRYRINTKVDTSCTCPQIYE
IESDDAIINKYYIYYQVIACSNNNQGWVIHNMRPYVLLFRRECAKLNLNE
DSPFIMGDAFHKPIKFFIDLVEELFAYFYSGHVQFDCAAHMLDPLDLNSI
EYYQKLLEPNEDFANYFKYNMSFCKCLRMPRRCPAHEYPQVKEDFNATFV
NQAKKKRCARRCEKMAEAESNLLDRKKSIVRLQRPSEMSGISTGQELDQD
NERELKRISRHQRRSERSIISITKEDYHTPLPDNRHELTVKDSVIRWSVN
PQILASFLDH

BO14665.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:05:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG30393-PA 354 CG30393-PA 1..354 1..354 1864 100 Plus
CG30391-PA 338 CG30391-PA 1..333 1..328 927 55.2 Plus
CG31910-PA 262 CG31910-PA 44..242 39..234 300 31.7 Plus