Clone BO14667 Report

Search the DGRC for BO14667

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:146
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG5024-RA
Protein status:BO14667.pep: validated full length
Sequenced Size:529

Clone Sequence Records

BO14667.3prime Sequence

527 bp (527 high quality bases) assembled on 2006-06-02

> BO14667.3prime
ATGGTCTAGAAAGCTTGCCGTCTCCATCATCATGGTCACAAAGCGAACGT
AGTCGATTTTCAGTTCCGTGTTGGCGTCGGCATCACGTATCATTTCCTCG
ATCTCGTCCTCTTCCATTTCATCGCCATATTCAGTCATTATCTGACGGAA
CTCATTCTCGTGTATAAAGCCAGATCCATCTTTGTCGAAGACTTTGAACG
CGAGGATAACTTCATCTTCGACAGTCAAATTCTCGTACCGTTTCGACATG
ATGTATAGGAAATCACTGAGATAAAGCTCGCCGGATCCATCCGTATCAAT
TTCGGTGATATAATCCTGTATCTCGTTTTCCGGCGGGTTGTGGGCCACGG
CTCGCAGGCAATCTCTCAATAACTTGATCGGAATGACCTTGGCATTATCG
TCGTCGAAGAGGGCGAAGGCCGCCTCACAATCCTTGAGCTGTTCATCATT
CAGCGTGTGGGTATGAACTGTTCGTACCTCCGGAGGTGGACTACTGAAAT
CAAAGTCATCCATGTCGACTGATAACT

BO14667.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG5024-PA 498 CG5024-RA 1..495 513..19 2400 99.3 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:37:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG5024-RB 643 CG5024-RB 109..604 514..19 2435 99.4 Minus
CG5024-RA 680 CG5024-RA 109..604 514..19 2435 99.4 Minus
Acam-RB 1224 CG17769-RB 284..426 305..163 205 77.1 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:37:16
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25811204..25811699 514..19 2435 99.4 Minus
3R 32079331 3R 25812194..25812336 305..163 205 76.2 Minus
Blast to na_te.dros performed on 2015-02-12 11:37:19 has no hits.

BO14667.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:33:55 Download gff for BO14667.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5024-PA 1..498 15..513 98   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:32:10 Download gff for BO14667.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5024-PA 1..498 15..513 98   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:51:34 Download gff for BO14667.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5024-RA 109..607 15..514 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:50:00 Download gff for BO14667.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5024-RA 109..607 15..514 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:50:00 Download gff for BO14667.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 25811204..25811702 15..514 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:51:34 Download gff for BO14667.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21636926..21637424 15..514 99   Minus

BO14667.5prime Sequence

527 bp (527 high quality bases) assembled on 2006-06-16

> BO14667.5prime
GAAGTTATCAGTCGACATGGATGACTTTGATTTCAGTAGTCCACCTCCGG
AGGTACGAACAGTTCATACCCACACGCTGAATGATGAACAGCTCAAGGAT
TGTGAGGCGGCCTTCGCCCTCTTCGACGACGATAATGCCAAGGTCATTCC
GATCAAGTTATTGAGAGATTGCCTGCGAGCCGTGGCCCACAACCCGCCGG
AAAACGAGATACAGGATTATATCACCGAAATTGATACGGATGGATCCGGC
GAGCTTTATCTCAGTGATTTCCTATACATCATGTCGAAACGGTACGAGAA
TTTGACTGTCGAAGATGAAGTTATCCTCGCGTTCAAAGTCTTCGACAAAG
ATGGATCTGGCTTTATACACGAGAATGAGTTCCGTCAGATAATGACTGAA
TATGGCGATGAAATGGAAGAGGACGAGATCGAGGAAATGATACGTGATGC
CGACGCCAACACGGAACTGAAAATCGACTACGTTCGCTTTGTGACCATGA
TGATGGAGACGGCAAGCTTTCTAGACC

BO14667.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG5024-PA 498 CG5024-RA 1..495 17..511 2400 99.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:41:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG5024-RB 643 CG5024-RB 109..604 16..511 2435 99.4 Plus
CG5024-RA 680 CG5024-RA 109..604 16..511 2435 99.4 Plus
Acam-RB 1224 CG17769-RB 284..426 225..367 205 77.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:41:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25811204..25811699 16..511 2435 99.4 Plus
3R 32079331 3R 25812194..25812336 225..367 205 76.2 Plus
Blast to na_te.dros performed on 2015-02-11 10:41:37 has no hits.

BO14667.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:33:56 Download gff for BO14667.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5024-PA 1..498 17..515 98   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:32:11 Download gff for BO14667.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5024-PA 1..498 17..515 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:10:29 Download gff for BO14667.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5024-RA 109..607 16..515 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:25:16 Download gff for BO14667.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5024-RA 109..607 16..515 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:25:16 Download gff for BO14667.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 25811204..25811702 16..515 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:10:29 Download gff for BO14667.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21636926..21637424 16..515 99   Plus

BO14667.complete Sequence

529 bp (529 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ638731

> BO14667.complete
GAAGTTATCAGTCGACATGGATGACTTTGATTTCAGTAGTCCACCTCCGG
AGGTACGAACAGTTCATACCCACACGCTGAATGATGAACAGCTCAAGGAT
TGTGAGGCGGCCTTCGCCCTCTTCGACGACGATAATGCCAAGGTCATTCC
GATCAAGTTATTGAGAGATTGCCTGCGAGCCGTGGCCCACAACCCGCCGG
AAAACGAGATACAGGATTATATCACCGAAATTGATACGGATGGATCCGGC
GAGCTTTATCTCAGTGATTTCCTATACATCATGTCGAAACGGTACGAGAA
TTTGACTGTCGAAGATGAAGTTATCCTCGCGTTCAAAGTCTTCGACAAAG
ATGGATCTGGCTTTATACACGAGAATGAGTTCCGTCAGATAATGACTGAA
TATGGCGATGAAATGGAAGAGGACGAGATCGAGGAAATGATACGTGATGC
CGACGCCAACACGGAACTGAAAATCGACTACGTTCGCTTTGTGACCATGA
TGATGGAGACGGCAAGCTTTCTAGACCAT

BO14667.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:41:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG5024-RB 498 CG5024-PB 1..495 17..511 2430 99.4 Plus
CG5024-RA 498 CG5024-PA 1..495 17..511 2430 99.4 Plus
CG17770-RA 495 CG17770-PA 206..348 225..367 205 76.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:41:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG5024-RB 643 CG5024-RB 109..604 16..511 2435 99.4 Plus
CG5024-RA 680 CG5024-RA 109..604 16..511 2435 99.4 Plus
Acam-RB 1224 CG17769-RB 284..426 225..367 205 76.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:41:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25811204..25811699 16..511 2435 99.4 Plus
3R 32079331 3R 25812194..25812336 225..367 205 76.2 Plus
Blast to na_te.dros performed on 2014-11-27 19:41:13 has no hits.

BO14667.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:18:10 Download gff for BO14667.complete
Subject Subject Range Query Range Percent Splice Strand
CG5024-RA 1..498 17..515 98   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:37:06 Download gff for BO14667.complete
Subject Subject Range Query Range Percent Splice Strand
CG5024-RA 109..607 16..515 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:02:07 Download gff for BO14667.complete
Subject Subject Range Query Range Percent Splice Strand
CG5024-RA 110..604 17..513 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:18:10 Download gff for BO14667.complete
Subject Subject Range Query Range Percent Splice Strand
CG5024-RA 109..607 16..515 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:06:22 Download gff for BO14667.complete
Subject Subject Range Query Range Percent Splice Strand
CG5024-RA 110..604 17..513 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:06:22 Download gff for BO14667.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25811205..25811699 17..513 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:02:07 Download gff for BO14667.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21636927..21637421 17..513 98   Plus

BO14667.pep Sequence

Translation from 16 to 529

> BO14667.pep
MDDFDFSSPPPEVRTVHTHTLNDEQLKDCEAAFALFDDDNAKVIPIKLLR
DCLRAVAHNPPENEIQDYITEIDTDGSGELYLSDFLYIMSKRYENLTVED
EVILAFKVFDKDGSGFIHENEFRQIMTEYGDEMEEDEIEEMIRDADANTE
LKIDYVRFVTMMMETASFLDH

BO14667.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:05:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG5024-PB 165 CG5024-PB 1..165 1..165 864 100 Plus
CG5024-PA 165 CG5024-PA 1..165 1..165 864 100 Plus
CG17770-PA 164 CG17770-PA 2..164 3..165 516 58.9 Plus
Cam-PD 149 CG8472-PD 5..146 21..162 317 41.5 Plus
Cam-PC 149 CG8472-PC 5..146 21..162 317 41.5 Plus