Clone BO14674 Report

Search the DGRC for BO14674

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:146
Well:74
Vector:pDNR-Dual
Associated Gene/TranscriptBuffy-RA
Protein status:BO14674.pep: validated full length
Sequenced Size:931

Clone Sequence Records

BO14674.3prime Sequence

808 bp (754 high quality bases) assembled on 2006-06-16

> BO14674.3prime
ATGGTCTAGAAAGCTTGCGGAATTCGTAAATCGTTGGTATATTTTTGGTA
CAATCAAGTTAAATATAAATCGCAGAATCATAAAAACTAGAATTAGGCCA
AAAACTACGCCTATAACCAAAGTGGTCCACTCTAAAGGATTCAGGCTGTT
GGTAGTGGGTAAAACGTGTGTGTTGATGCCACTCCAACCACCATTCTCGT
TAATCCACGGAACCAGCTCATCTTCGATCACCTCGGAAACGCTCTCCATC
AACTTGGGCAAGTATTCCGGATGTCCTTGGCGTACACAATCAACGGACAG
CCCACCGGCGATGGCGAACAGAGAGATCACCTTGCTCCACGTAATCTCCA
CCCGGAAGAGCTCGCGACCAACGGCTCCCAAAAGCAAGCTCACAGCATCC
GGAGTATGGAACTCACCACCCGGATTCCGACAAATCTGACGAGCTACTCC
GTTGTATATCCGGGGATGCATGCGCTCCAGTTCATCGCCCAGCACTTGGA
CCGCTGGAAACACATCGCGCACAATGCCCATGGAGGTGGAGCCCAGTATG
CTACGTATGCGCTGCAGTCCCAGCTTTTTGTTGAACAAACCAGATCTTCT
GAGGCGTCTCTTGATATAATGACCGCACAGGCAACGACCCTGAGAAATGA
TATCCTGCGCTGGAATCTGTGCCGCCTTCCAGCCAATCGTGTAGGAGAGT
TTCCTGGTTACGGCATCGCTGACATTGCTCAACCTACGCCTCGTGGTCTC
CTTGGGACACCACCCACCTCCAGTAGTGATGCGGAATGTAGTGTGGCTGG
AAAACTGA

BO14674.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG8238-PA 900 Buffy-RA 158..897 758..19 3625 99.5 Minus
CG8238-PA 900 Buffy-RA 107..157 808..758 230 98 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 11:01:44
Subject Length Description Subject Range Query Range Score Percent Strand
Buffy-RA 1038 CG8238-RA 245..1035 808..19 3870 99.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 11:01:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11688019..11688328 493..184 1535 99.7 Minus
2R 25286936 2R 11688389..11688554 184..19 830 100 Minus
2R 25286936 2R 11687567..11687737 808..639 760 97.7 Minus
2R 25286936 2R 11687811..11687959 641..493 745 100 Minus
Blast to na_te.dros performed on 2015-02-06 11:01:41 has no hits.

BO14674.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:33:59 Download gff for BO14674.3prime
Subject Subject Range Query Range Percent Splice Strand
Buffy-PA 108..900 15..807 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:32:16 Download gff for BO14674.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8238-PA 108..900 15..807 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:47:36 Download gff for BO14674.3prime
Subject Subject Range Query Range Percent Splice Strand
Buffy-RA 246..1038 15..807 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:30:51 Download gff for BO14674.3prime
Subject Subject Range Query Range Percent Splice Strand
Buffy-RA 246..1038 15..807 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:30:51 Download gff for BO14674.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 11687568..11687736 640..807 97 -> Minus
2R 11687813..11687959 493..639 100 -> Minus
2R 11688020..11688328 184..492 99 -> Minus
2R 11688390..11688562 10..183 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:47:36 Download gff for BO14674.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7575318..7575464 493..639 100 -> Minus
arm_2R 7575073..7575241 640..807 97 -> Minus
arm_2R 7575525..7575833 184..492 99 -> Minus
arm_2R 7575895..7576067 10..183 97   Minus

BO14674.5prime Sequence

871 bp (734 high quality bases) assembled on 2006-06-16

> BO14674.5prime
GAAGTTATCAGTCGACATGCCCGGCACCTCGTATCCCACGAATAACGATA
ATTTCAGCAACGGATTTCCGATGGCCACCACACAAAGTGAGCGCCTCTTG
CAGGCCCAGAATCGAAGAAAGTTCAGTTTTCCAGCCACACTACATTCCGC
ATCACTACTGGAGGTGGGTGGTGGTCCCAAGGAGACCACGAGGCGTAGGT
TGAGCAATGTCAGCGATGCCGTAACCAGGAAACTCTCCTACACGATTGGC
TGGAAGGCGGCACAGATTCCAGCGCAGGATATCATTTCTCAGGGTCGTTG
CCTGTGCGGTCATTATATCAAGAGACGCCTCAGAAGATCTGGTTTGTTCA
ACAAAAAGCTGGGACTGCAGCGCATACGTAGCATACTGGGCTCCACCTCC
ATGGGCATTGTGCGCGATGTGTTTCCAGCGGTCCAAGTGCTGGGCGATGA
ACTGGAGCGCATGCATCCCCGGATATACAACGGAGTAGCTCGTCAGATTT
GTCGGAATCCGGGTGGTGAGTTCCATACTCCGGATGCTGTGAGCTTGCTT
TTGGGAGCCGTTGGTCGCGAGCTCTTCCGGGTGGAGATTACGTGGAGCAA
GGTGATCTCTCTGTTCGCCATCGCCGGTGGGCTGTCCGTTGATTGTGTAC
GCCAAGGACATCCGGAATACTTGCCCAAGTTGATGGAGAGCGTTTCCGAG
GTGATCGAAGATGAGCTGGTTCCGTGGATTAACGAGAATGGTGGTTGGAG
TGGCATCAACACACACGTTTTACCCACTACCAACAGCCTGAATCCTTTAG
AGTGGACCACTTTGGTTATAGGCGTAGTTTTTGGCCTAAATCTAGTTTTT
ATGATTCTGCGATTTATATTT

BO14674.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG8238-PA 900 Buffy-RA 1..855 17..871 4150 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:56:09
Subject Length Description Subject Range Query Range Score Percent Strand
Buffy-RA 1038 CG8238-RA 137..993 15..871 4210 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:56:03
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11688019..11688328 439..748 1535 99.7 Plus
2R 25286936 2R 11687459..11687737 15..293 1350 98.9 Plus
2R 25286936 2R 11687811..11687959 291..439 745 100 Plus
2R 25286936 2R 11688389..11688512 748..871 605 99.2 Plus
Blast to na_te.dros performed on 2015-02-12 11:56:06 has no hits.

BO14674.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:34:00 Download gff for BO14674.5prime
Subject Subject Range Query Range Percent Splice Strand
Buffy-PA 1..855 17..871 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:32:17 Download gff for BO14674.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8238-PA 1..855 17..871 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:09:19 Download gff for BO14674.5prime
Subject Subject Range Query Range Percent Splice Strand
Buffy-RA 137..993 15..871 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:00:14 Download gff for BO14674.5prime
Subject Subject Range Query Range Percent Splice Strand
Buffy-RA 137..993 15..871 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:00:14 Download gff for BO14674.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 11687459..11687736 15..292 98 -> Plus
2R 11687813..11687959 293..439 100 -> Plus
2R 11688020..11688328 440..748 99 -> Plus
2R 11688390..11688512 749..871 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:09:19 Download gff for BO14674.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7575318..7575464 293..439 100 -> Plus
arm_2R 7574964..7575241 15..292 98 -> Plus
arm_2R 7575525..7575833 440..748 99 -> Plus
arm_2R 7575895..7576017 749..871 99   Plus

BO14674.complete Sequence

931 bp (931 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633221

> BO14674.complete
GAAGTTATCAGTCGACATGCCCGGCACCTCGTATCCCACGAATAACGATA
ATTTCAGCAACGGATTTCCGATGGCCACCACACAAAGTGAGCGCCTCTTG
CAGGCCCAGAATCGAAGAAAGTTCAGTTTTCCAGCCACACTACATTCCGC
ATCACTACTGGAGGTGGGTGGTGGTCCCAAGGAGACCACGAGGCGTAGGT
TGAGCAATGTCAGCGATGCCGTAACCAGGAAACTCTCCTACACGATTGGC
TGGAAGGCGGCACAGATTCCAGCGCAGGATATCATTTCTCAGGGTCGTTG
CCTGTGCGGTCATTATATCAAGAGACGCCTCAGAAGATCTGGTTTGTTCA
ACAAAAAGCTGGGACTGCAGCGCATACGTAGCATACTGGGCTCCACCTCC
ATGGGCATTGTGCGCGATGTGTTTCCAGCGGTCCAAGTGCTGGGCGATGA
ACTGGAGCGCATGCATCCCCGGATATACAACGGAGTAGCTCGTCAGATTT
GTCGGAATCCGGGTGGTGAGTTCCATACTCCGGATGCTGTGAGCTTGCTT
TTGGGAGCCGTTGGTCGCGAGCTCTTCCGGGTGGAGATTACGTGGAGCAA
GGTGATCTCTCTGTTCGCCATCGCCGGTGGGCTGTCCGTTGATTGTGTAC
GCCAAGGACATCCGGAATACTTGCCCAAGTTGATGGAGAGCGTTTCCGAG
GTGATCGAAGATGAGCTGGTTCCGTGGATTAACGAGAATGGTGGTTGGAG
TGGCATCAACACACACGTTTTACCCACTACCAACAGCCTGAATCCTTTAG
AGTGGACCACTTTGGTTATAGGCGTAGTTTTTGGCCTAATTCTAGTTTTT
ATGATTCTGCGATTTATATTTAACTTGATTGTACCAAAAATATACCAACG
ATTTACGAATTCCGCAAGCTTTCTAGACCAT

BO14674.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:12:52
Subject Length Description Subject Range Query Range Score Percent Strand
Buffy-RA 900 CG8238-PA 1..897 17..913 4425 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:12:53
Subject Length Description Subject Range Query Range Score Percent Strand
Buffy-RA 1038 CG8238-RA 137..1035 15..913 4435 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:12:51
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11688019..11688328 439..748 1535 99.7 Plus
2R 25286936 2R 11687459..11687737 15..293 1350 98.9 Plus
2R 25286936 2R 11688389..11688554 748..913 830 100 Plus
2R 25286936 2R 11687811..11687959 291..439 745 100 Plus
Blast to na_te.dros performed on 2014-11-26 22:12:52 has no hits.

BO14674.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:17:55 Download gff for BO14674.complete
Subject Subject Range Query Range Percent Splice Strand
Buffy-RA 1..900 17..917 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:02:01 Download gff for BO14674.complete
Subject Subject Range Query Range Percent Splice Strand
Buffy-RA 156..1062 15..922 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:50:37 Download gff for BO14674.complete
Subject Subject Range Query Range Percent Splice Strand
Buffy-RA 139..1035 17..915 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:17:55 Download gff for BO14674.complete
Subject Subject Range Query Range Percent Splice Strand
Buffy-RA 156..1062 15..922 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:54:29 Download gff for BO14674.complete
Subject Subject Range Query Range Percent Splice Strand
Buffy-RA 139..1035 17..915 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:54:29 Download gff for BO14674.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11688390..11688554 749..915 98   Plus
2R 11687461..11687736 17..292 98 -> Plus
2R 11687813..11687959 293..439 100 -> Plus
2R 11688020..11688328 440..748 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:50:37 Download gff for BO14674.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7575895..7576059 749..915 98   Plus
arm_2R 7574966..7575241 17..292 98 -> Plus
arm_2R 7575318..7575464 293..439 100 -> Plus
arm_2R 7575525..7575833 440..748 99 -> Plus

BO14674.pep Sequence

Translation from 16 to 931

> BO14674.pep
MPGTSYPTNNDNFSNGFPMATTQSERLLQAQNRRKFSFPATLHSASLLEV
GGGPKETTRRRLSNVSDAVTRKLSYTIGWKAAQIPAQDIISQGRCLCGHY
IKRRLRRSGLFNKKLGLQRIRSILGSTSMGIVRDVFPAVQVLGDELERMH
PRIYNGVARQICRNPGGEFHTPDAVSLLLGAVGRELFRVEITWSKVISLF
AIAGGLSVDCVRQGHPEYLPKLMESVSEVIEDELVPWINENGGWSGINTH
VLPTTNSLNPLEWTTLVIGVVFGLILVFMILRFIFNLIVPKIYQRFTNSA
SFLDH

BO14674.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:06:21
Subject Length Description Subject Range Query Range Score Percent Strand
Buffy-PA 299 CG8238-PA 1..299 1..299 1553 100 Plus
Debcl-PA 300 CG33134-PA 96..291 88..284 521 47.7 Plus