Clone Sequence Records
BO14675.3prime Sequence
602 bp (602 high quality bases) assembled on 2006-06-02
> BO14675.3prime
ATGGTCTAGAAAGCTTGCGCCCTCAGTGAGTGCGTAGGTCATAAGGGCCA
GGATGCCGGTGTTTCCCAGAGTCTCTACAACGTTGCTAAGGCCCTCGTTG
CAGCTATCGACAATTGCACCGCCGTATCTGGCGAGGAGCGCGGTGGCAGC
CACACCGAAGTAGATATGGTTGCCGTCCTTGATGGCCAGATACAACGTGG
AGCCGATGTTGCCCAACAGAGCGAGGTCCATCAGCGTCTCCGTGGAGCTG
TCCCAGTCCTCGCTGATCTTGCCGATCATGTCGTAGAACAGTGGAATCAA
CGACAGGCCGTGCACCAGCGCCACTCCCGACTGATCGGATACCAGGTAGA
ACTCGATGTTCGCCAGTGGCAGCGGGATAACCTCCAGTATGATGGCTGAG
ATCATAAAGGTGCGTCCGCACTCGTCGGGCTCGTTGGCAAAGGAGCGAAC
CACGCCCAGCACTCCGTGGACCAGGCTGAAGGATGCCGCCAGGAAGGCAT
ACGGATGGTCCGCCGGGGTCAGTGAGGTCATCGTGTAAATGCAGGCCAAG
ATCAGCAGCAGATTGACCAGTGCCCCCACCACATGCATGTCGACTGATAA
CT
BO14675.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12679-PA | 573 | CG12679-RA | 1..570 | 588..19 | 2850 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 18:31:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12679-RA | 759 | CG12679-RA | 131..700 | 588..19 | 2850 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:31:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20375823..20376392 | 19..588 | 2850 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-30 18:31:49 has no hits.
BO14675.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:34:01 Download gff for
BO14675.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12679-PA | 1..573 | 15..588 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:32:19 Download gff for
BO14675.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12679-PA | 1..573 | 15..588 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:59:18 Download gff for
BO14675.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12679-RA | 131..705 | 11..588 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:12:27 Download gff for
BO14675.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12679-RA | 131..705 | 11..588 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:12:27 Download gff for
BO14675.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20375818..20376392 | 11..588 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:59:18 Download gff for
BO14675.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20246845..20247419 | 11..588 | 99 | | Plus |
BO14675.5prime Sequence
602 bp (602 high quality bases) assembled on 2006-06-02
> BO14675.5prime
GAAGTTATCAGTCGACATGCATGTGGTGGGGGCACTGGTCAATCTGCTGC
TGATCTTGGCCTGCATTTACACGATGACCTCACTGACCCCGGCGGACCAT
CCGTATGCCTTCCTGGCGGCATCCTTCAGCCTGGTCCACGGAGTGCTGGG
CGTGGTTCGCTCCTTTGCCAACGAGCCCGACGAGTGCGGACGCACCTTTA
TGATCTCAGCCATCATACTGGAGGTTATCCCGCTGCCACTGGCGAACATC
GAGTTCTACCTGGTATCCGATCAGTCGGGAGTGGCGCTGGTGCACGGCCT
GTCGTTGATTCCACTGTTCTACGACATGATCGGCAAGATCAGCGAGGACT
GGGACAGCTCCACGGAGACGCTGATGGACCTCGCTCTGTTGGGCAACATC
GGCTCCACGTTGTATCTGGCCATCAAGGACGGCAACCATATCTACTTCGG
TGTGGCTGCCACCGCGCTCCTCGCCAGATACGGCGGTGCAATTGTCGATA
GCTGCAACGAGGGCCTTAGCAACGTTGTAGAGACTCTGGGAAACACCGGC
ATCCTGGCCCTTATGACCTACGCACTCACTGAGGGCGCAAGCTTTCTAGA
CC
BO14675.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12679-PA | 573 | CG12679-RA | 1..570 | 17..586 | 2850 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:55:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12679-RA | 759 | CG12679-RA | 131..700 | 17..586 | 2850 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:55:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20375823..20376392 | 586..17 | 2850 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 11:55:55 has no hits.
BO14675.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:34:01 Download gff for
BO14675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12679-PA | 1..573 | 17..590 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:32:20 Download gff for
BO14675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12679-PA | 1..573 | 17..590 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:09:17 Download gff for
BO14675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12679-RA | 131..705 | 17..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:59:45 Download gff for
BO14675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12679-RA | 131..705 | 17..594 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:59:45 Download gff for
BO14675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20375818..20376392 | 17..594 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:09:17 Download gff for
BO14675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20246845..20247419 | 17..594 | 99 | | Minus |
BO14675.complete Sequence
604 bp (604 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633222
> BO14675.complete
GAAGTTATCAGTCGACATGCATGTGGTGGGGGCACTGGTCAATCTGCTGC
TGATCTTGGCCTGCATTTACACGATGACCTCACTGACCCCGGCGGACCAT
CCGTATGCCTTCCTGGCGGCATCCTTCAGCCTGGTCCACGGAGTGCTGGG
CGTGGTTCGCTCCTTTGCCAACGAGCCCGACGAGTGCGGACGCACCTTTA
TGATCTCAGCCATCATACTGGAGGTTATCCCGCTGCCACTGGCGAACATC
GAGTTCTACCTGGTATCCGATCAGTCGGGAGTGGCGCTGGTGCACGGCCT
GTCGTTGATTCCACTGTTCTACGACATGATCGGCAAGATCAGCGAGGACT
GGGACAGCTCCACGGAGACGCTGATGGACCTCGCTCTGTTGGGCAACATC
GGCTCCACGTTGTATCTGGCCATCAAGGACGGCAACCATATCTACTTCGG
TGTGGCTGCCACCGCGCTCCTCGCCAGATACGGCGGTGCAATTGTCGATA
GCTGCAACGAGGGCCTTAGCAACGTTGTAGAGACTCTGGGAAACACCGGC
ATCCTGGCCCTTATGACCTACGCACTCACTGAGGGCGCAAGCTTTCTAGA
CCAT
BO14675.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:58:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12679-RA | 573 | CG12679-PA | 1..570 | 17..586 | 2850 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:58:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12679-RA | 759 | CG12679-RA | 131..700 | 17..586 | 2850 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:58:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20375823..20376392 | 586..17 | 2850 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:58:31 has no hits.
BO14675.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:07:40 Download gff for
BO14675.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12679-RA | 1..573 | 17..590 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:23:55 Download gff for
BO14675.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12679-RA | 131..705 | 17..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:54:15 Download gff for
BO14675.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12679-RA | 131..700 | 17..588 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:07:40 Download gff for
BO14675.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12679-RA | 131..705 | 17..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:35:37 Download gff for
BO14675.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12679-RA | 131..700 | 17..588 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:35:37 Download gff for
BO14675.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20375821..20376392 | 17..588 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:54:15 Download gff for
BO14675.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20246848..20247419 | 17..588 | 99 | | Minus |
BO14675.pep Sequence
Translation from 16 to 604
> BO14675.pep
MHVVGALVNLLLILACIYTMTSLTPADHPYAFLAASFSLVHGVLGVVRSF
ANEPDECGRTFMISAIILEVIPLPLANIEFYLVSDQSGVALVHGLSLIPL
FYDMIGKISEDWDSSTETLMDLALLGNIGSTLYLAIKDGNHIYFGVAATA
LLARYGGAIVDSCNEGLSNVVETLGNTGILALMTYALTEGASFLDH
BO14675.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:01:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12679-PA | 190 | CG12679-PA | 1..190 | 1..190 | 959 | 100 | Plus |
| CG14269-PB | 190 | CG14269-PB | 1..188 | 1..188 | 395 | 42.6 | Plus |
| CG14269-PA | 190 | CG14269-PA | 1..188 | 1..188 | 395 | 42.6 | Plus |
| CG16782-PA | 200 | CG16782-PA | 7..197 | 4..188 | 247 | 32.3 | Plus |
| CG14537-PA | 203 | CG14537-PA | 15..203 | 9..192 | 235 | 31.1 | Plus |
