Clone Sequence Records
BO14679.3prime Sequence
620 bp (620 high quality bases) assembled on 2006-06-02
> BO14679.3prime
ATGGTCTAGAAAGCTTGCGATGGGGAGGTTGCCTCGCTTTGTGAAAGAAC
CTGGTGGCGCGGAAGGCAGCTGAGATTTTTTCAAAGACTCCATTCGTCCA
CCCGTCCGCACTAGATCGCTCCCCCCCTCACACTCCCCGTACTCCACGCA
CCGCACATATCCTTCGCAGTCGCATTCGTGGAATTCTTCGTCTTCCTCGG
AGTCCACGTCCAGTTGGCCGCCCGCCATTAGAGCCAGCTCGAAGTTACCC
TGTCTCCGCCGACTGTCCATGTCCAGAAGAATTTCTCCGTCCGCTCCGAT
TTCCATGTCACTGACCTCATAGACGTAGTCGTCCTCACTTAGCACATCCA
GATGCACGAGTCCGCCAAACATGGTGAGATGGGAAATACGACAGGAAGGG
TTCGTATTTTTGGCAGAGGTCATGATCGTATTATCCCGGGCAAGTCCAAC
GCTCTGAGTCCGATTCCTTCCTGGCAGGTGTCGCGGTCTGAAGATGGGAG
TCCGCCTATACAGCTTCAGCAGGAGCGTAAGGGCTTTGTTTCTCGCCATG
AGCAGCAGCTGCCCCATCCATGGCTGCTTGCGACTGATCAGAAAAGAGGC
TCTCATGTCGACTGATAACT
BO14679.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11226-PA | 591 | CG11226-RA | 1..588 | 606..19 | 2940 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:37:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11226-RA | 1103 | CG11226-RA | 79..666 | 606..19 | 2940 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:37:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22837146..22837733 | 606..19 | 2940 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-31 10:37:26 has no hits.
BO14679.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:34:06 Download gff for
BO14679.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11226-PA | 1..591 | 15..606 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:32:26 Download gff for
BO14679.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11226-PA | 1..591 | 15..606 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:41:28 Download gff for
BO14679.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11226-RA | 70..671 | 13..613 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:49:36 Download gff for
BO14679.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11226-RA | 70..671 | 13..613 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:49:36 Download gff for
BO14679.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22837137..22837738 | 13..613 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:41:28 Download gff for
BO14679.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22830237..22830838 | 13..613 | 99 | | Minus |
BO14679.5prime Sequence
620 bp (620 high quality bases) assembled on 2006-06-16
> BO14679.5prime
GAAGTTATCAGTCGACATGAGAGCCTCTTTTCTGATCAGTCGCAAGCAGC
CATGGATGGGGCAGCTGCTGCTCATGGCGAGAAACAAAGCCCTTACGCTC
CTGCTGAAGCTGTATAGGCGGACTCCCATCTTCAGACCGCGACACCTGCC
AGGAAGGAATCGGACTCAGAGCGTTGGACTTGCCCGGGATAATACGATCA
TGACCTCTGCCAAAAATACGAACCCTTCCTGTCGTATTTCCCATCTCACC
ATGTTTGGCGGACTCGTGCATCTGGATGTGCTAAGTGAGGACGACTACGT
CTATGAGGTCAGTGACATGGAAATCGGAGCGGACGGAGAAATTCTTCTGG
ACATGGACAGTCGGCGGAGACAGGGTAACTTCGAGCTGGCTCTAATGGCG
GGCGGCCAACTGGACGTGGACTCCGAGGAAGACGAAGAATTCCACGAATG
CGACTGCGAAGGATATGTGCGGTGCGTGGAGTACGGGGAGTGTGAGGGGG
GGAGCGATCTAGTGCGGACGGGTGGACGAATGGAGTCTTTGAAAAAATCT
CAGCTGCCTTCCGCGCCACCAGGTTCTTTCACAAAGCGAGGCAACCTCCC
CATCGCAAGCTTTCTAGACC
BO14679.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11226-PA | 591 | CG11226-RA | 1..588 | 17..604 | 2940 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:46:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11226-RA | 1103 | CG11226-RA | 79..666 | 17..604 | 2940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:46:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22837146..22837733 | 17..604 | 2940 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 21:46:51 has no hits.
BO14679.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:34:07 Download gff for
BO14679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11226-PA | 1..591 | 17..608 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:32:27 Download gff for
BO14679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11226-PA | 1..591 | 17..608 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 00:50:25 Download gff for
BO14679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11226-RA | 70..671 | 10..610 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:50:24 Download gff for
BO14679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11226-RA | 70..671 | 10..610 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:50:24 Download gff for
BO14679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22837137..22837738 | 10..610 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 00:50:25 Download gff for
BO14679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22830237..22830838 | 10..610 | 99 | | Plus |
BO14679.complete Sequence
622 bp (622 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633224
> BO14679.complete
GAAGTTATCAGTCGACATGAGAGCCTCTTTTCTGATCAGTCGCAAGCAGC
CATGGATGGGGCAGCTGCTGCTCATGGCGAGAAACAAAGCCCTTACGCTC
CTGCTGAAGCTGTATAGGCGGACTCCCATCTTCAGACCGCGACACCTGCC
AGGAAGGAATCGGACTCAGAGCGTTGGACTTGCCCGGGATAATACGATCA
TGACCTCTGCCAAAAATACGAACCCTTCCTGTCGTATTTCCCATCTCACC
ATGTTTGGCGGACTCGTGCATCTGGATGTGCTAAGTGAGGACGACTACGT
CTATGAGGTCAGTGACATGGAAATCGGAGCGGACGGAGAAATTCTTCTGG
ACATGGACAGTCGGCGGAGACAGGGTAACTTCGAGCTGGCTCTAATGGCG
GGCGGCCAACTGGACGTGGACTCCGAGGAAGACGAAGAATTCCACGAATG
CGACTGCGAAGGATATGTGCGGTGCGTGGAGTACGGGGAGTGTGAGGGGG
GGAGCGATCTAGTGCGGACGGGTGGACGAATGGAGTCTTTGAAAAAATCT
CAGCTGCCTTCCGCGCCACCAGGTTCTTTCACAAAGCGAGGCAACCTCCC
CATCGCAAGCTTTCTAGACCAT
BO14679.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:29:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11226-RA | 591 | CG11226-PA | 1..588 | 17..604 | 2940 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:29:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11226-RA | 1103 | CG11226-RA | 79..666 | 17..604 | 2940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:29:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22837146..22837733 | 17..604 | 2940 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:29:35 has no hits.
BO14679.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:17:57 Download gff for
BO14679.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11226-RA | 1..591 | 17..608 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:36:49 Download gff for
BO14679.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11226-RA | 70..671 | 10..610 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:51:14 Download gff for
BO14679.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11226-RA | 79..666 | 17..606 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:17:57 Download gff for
BO14679.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11226-RA | 70..671 | 10..610 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:19:40 Download gff for
BO14679.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11226-RA | 79..666 | 17..606 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:19:40 Download gff for
BO14679.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22837146..22837733 | 17..606 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:51:14 Download gff for
BO14679.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22830246..22830833 | 17..606 | 99 | | Plus |
BO14679.pep Sequence
Translation from 16 to 622
> BO14679.pep
MRASFLISRKQPWMGQLLLMARNKALTLLLKLYRRTPIFRPRHLPGRNRT
QSVGLARDNTIMTSAKNTNPSCRISHLTMFGGLVHLDVLSEDDYVYEVSD
MEIGADGEILLDMDSRRRQGNFELALMAGGQLDVDSEEDEEFHECDCEGY
VRCVEYGECEGGSDLVRTGGRMESLKKSQLPSAPPGSFTKRGNLPIASFL
DH
BO14679.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:48:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11226-PA | 196 | CG11226-PA | 1..196 | 1..196 | 1026 | 100 | Plus |
